Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0358.Seq
         (941 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051940-1|AAK93364.1|  424|Drosophila melanogaster LD41911p pro...    31   3.0  
AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA...    31   3.0  
AE013599-2651|AAF57722.3|  424|Drosophila melanogaster CG5581-PA...    31   3.0  
X17495-1|CAA35530.1|  406|Drosophila melanogaster otefin protein.      29   7.0  

>AY051940-1|AAK93364.1|  424|Drosophila melanogaster LD41911p
           protein.
          Length = 424

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 25/74 (33%), Positives = 34/74 (45%)
 Frame = +1

Query: 349 LKLLRAGDWGLQLSPINEEFLVSASHKLALITSLPFVHTARRYYRLNDLVRSSADTRWLH 528
           L  LRA   G ++SP +   L S +   A   SL +   ARR  R ND   S A  RWL+
Sbjct: 339 LARLRAERIGDRISPYSRRTLASGN---AGSGSLGYEPRARRSLRPNDNSVSEAFNRWLN 395

Query: 529 GRRRCWEVDQNLII 570
              + + +   L I
Sbjct: 396 SLEQKYHIKSKLFI 409


>AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA,
           isoform A protein.
          Length = 984

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 102 DKSLHQLRTAMHHHPPNQE 46
           ++ +H L TAM HHP NQ+
Sbjct: 211 EQQIHSLETAMEHHPSNQQ 229


>AE013599-2651|AAF57722.3|  424|Drosophila melanogaster CG5581-PA
           protein.
          Length = 424

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 25/74 (33%), Positives = 34/74 (45%)
 Frame = +1

Query: 349 LKLLRAGDWGLQLSPINEEFLVSASHKLALITSLPFVHTARRYYRLNDLVRSSADTRWLH 528
           L  LRA   G ++SP +   L S +   A   SL +   ARR  R ND   S A  RWL+
Sbjct: 339 LARLRAERIGDRISPYSRRTLASGN---AGSGSLGYEPRARRSLRPNDNSVSEAFNRWLN 395

Query: 529 GRRRCWEVDQNLII 570
              + + +   L I
Sbjct: 396 SLEQKYHIKSKLFI 409


>X17495-1|CAA35530.1|  406|Drosophila melanogaster otefin protein.
          Length = 406

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 24/74 (32%), Positives = 34/74 (45%)
 Frame = +1

Query: 349 LKLLRAGDWGLQLSPINEEFLVSASHKLALITSLPFVHTARRYYRLNDLVRSSADTRWLH 528
           L  LR+   G ++SP +   L S +   A   SL +   ARR  R ND   S A  RWL+
Sbjct: 321 LARLRSERIGDRISPYSRRTLASGN---AGSGSLGYEPRARRSLRPNDNSVSEAFNRWLN 377

Query: 529 GRRRCWEVDQNLII 570
              + + +   L I
Sbjct: 378 SLEQKYHIKSKLFI 391


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,093,450
Number of Sequences: 53049
Number of extensions: 863227
Number of successful extensions: 1947
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1947
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4669258284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)