Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0354.Seq
         (911 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   3.3  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   5.8  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   5.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.8  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 380 TQKRPSQQSAQRHGEN 333
           T+ RP +QS++RH +N
Sbjct: 251 TKMRPKRQSSRRHRKN 266


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 638 CGNKPYAVFKASSGRVH 688
           CGN PY +  A    +H
Sbjct: 368 CGNGPYPILNAIKNTLH 384


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 638 CGNKPYAVFKASSGRVH 688
           CGN PY +  A    +H
Sbjct: 368 CGNGPYPILNAIKNTLH 384


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 63  FETFVIIALFMHYLLPIL 10
           FE  VI  LF  YLLPI+
Sbjct: 126 FEEAVIDYLFTVYLLPII 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,898
Number of Sequences: 336
Number of extensions: 2939
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25444518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)