Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0354.Seq
         (911 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC028572-1|AAH28572.1|  716|Homo sapiens FLYWCH-type zinc finger...    31   4.4  
BC001973-1|AAH01973.1|  466|Homo sapiens FLYWCH1 protein protein.      31   4.4  
AB046772-1|BAB13378.1|  726|Homo sapiens KIAA1552 protein protein.     31   4.4  
Y16789-1|CAA76385.1|  404|Homo sapiens type I hair keratin 3B pr...    31   7.7  
X82634-1|CAA57956.1|  361|Homo sapiens hair keratin acidic 3-II ...    31   7.7  
BC036354-1|AAH36354.1|  242|Homo sapiens PCSK4 protein protein.        31   7.7  
BC009971-1|AAH09971.1|  404|Homo sapiens keratin 33B protein.          31   7.7  
AY358963-1|AAQ89322.1|  755|Homo sapiens prohormone convertase p...    31   7.7  

>BC028572-1|AAH28572.1|  716|Homo sapiens FLYWCH-type zinc finger 1
           protein.
          Length = 716

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 796 VFWDXXNTASFNC-GRVISXGKRLAAARGHSIQGGPEMNAARRSLEYCIRFIPA 638
           V+W   + A   C  R I+ G+R+   RGH  Q   E   ARR  E  +  + A
Sbjct: 300 VYWTCRDHALHGCRSRAITQGQRVTVMRGHCHQPDMEGLEARRQQEKAVETLQA 353


>BC001973-1|AAH01973.1|  466|Homo sapiens FLYWCH1 protein protein.
          Length = 466

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 796 VFWDXXNTASFNC-GRVISXGKRLAAARGHSIQGGPEMNAARRSLEYCIRFIPA 638
           V+W   + A   C  R I+ G+R+   RGH  Q   E   ARR  E  +  + A
Sbjct: 62  VYWTCRDHALHGCRSRAITQGQRVTVMRGHCHQPDMEGLEARRQQEKAVETLQA 115


>AB046772-1|BAB13378.1|  726|Homo sapiens KIAA1552 protein protein.
          Length = 726

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 796 VFWDXXNTASFNC-GRVISXGKRLAAARGHSIQGGPEMNAARRSLEYCIRFIPA 638
           V+W   + A   C  R I+ G+R+   RGH  Q   E   ARR  E  +  + A
Sbjct: 310 VYWTCRDHALHGCRSRAITQGQRVTVMRGHCHQPDMEGLEARRQQEKAVETLQA 363


>Y16789-1|CAA76385.1|  404|Homo sapiens type I hair keratin 3B
           protein.
          Length = 404

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +1

Query: 382 CPAAPTRCRCLGRCPRPIWPATRDPRDPRIRCGRC 486
           C      C     C +PI     +P  PR RCG C
Sbjct: 365 CKLPSNPCATTNACEKPIGSCVTNPCGPRSRCGPC 399


>X82634-1|CAA57956.1|  361|Homo sapiens hair keratin acidic 3-II
           protein.
          Length = 361

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +1

Query: 382 CPAAPTRCRCLGRCPRPIWPATRDPRDPRIRCGRC 486
           C      C     C +PI     +P  PR RCG C
Sbjct: 322 CKLPSNPCATTNACEKPIGSCVTNPCGPRSRCGPC 356


>BC036354-1|AAH36354.1|  242|Homo sapiens PCSK4 protein protein.
          Length = 242

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 382 CPAAPTRCRCLGRCPRPIWPATRDPRDPRIRCGRCFHQNCQVSA 513
           CP + T  +  G C  P  P +R    PR+R   C H  C  SA
Sbjct: 157 CPPSSTLDQQQGSCMGPTTPDSR----PRLRAAACPHHRCPASA 196


>BC009971-1|AAH09971.1|  404|Homo sapiens keratin 33B protein.
          Length = 404

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +1

Query: 382 CPAAPTRCRCLGRCPRPIWPATRDPRDPRIRCGRC 486
           C      C     C +PI     +P  PR RCG C
Sbjct: 365 CKLPSNPCATTNACEKPIGSCVTNPCGPRSRCGPC 399


>AY358963-1|AAQ89322.1|  755|Homo sapiens prohormone convertase
           protein.
          Length = 755

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 382 CPAAPTRCRCLGRCPRPIWPATRDPRDPRIRCGRCFHQNCQVSA 513
           CP + T  +  G C  P  P +R    PR+R   C H  C  SA
Sbjct: 670 CPPSSTLDQQQGSCMGPTTPDSR----PRLRAAACPHHRCPASA 709


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,225,268
Number of Sequences: 237096
Number of extensions: 1776481
Number of successful extensions: 5412
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5410
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)