Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0354.Seq
(911 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 26 0.41
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 25 1.3
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 25 1.3
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 25 1.3
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 25 1.3
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 25 1.3
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 25 1.3
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 25 1.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.9
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 5.1
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 5.1
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 5.1
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 26.2 bits (55), Expect = 0.41
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 436 KSDEDSGLDSDTESELPGKLKNVQVSSLLSDM 341
KSD G +S S +P + + VSS SDM
Sbjct: 224 KSDTSDGPESHQNSNVPKSVAGLNVSSRRSDM 255
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -2
Query: 376 KNVQVSSLLSDMEKIKQELIKNNEYEKLKEKCRRSDSDE 260
KN + L ++ EK+ +E N Y + +E+ + S +E
Sbjct: 15 KNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNE 53
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -2
Query: 376 KNVQVSSLLSDMEKIKQELIKNNEYEKLKEKCRRSDSDE 260
KN + L ++ EK+ +E N Y + +E+ + S +E
Sbjct: 15 KNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNE 53
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -2
Query: 376 KNVQVSSLLSDMEKIKQELIKNNEYEKLKEKCRRSDSDE 260
KN + L ++ EK+ +E N Y + +E+ + S +E
Sbjct: 15 KNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNE 53
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -2
Query: 376 KNVQVSSLLSDMEKIKQELIKNNEYEKLKEKCRRSDSDE 260
KN + L ++ EK+ +E N Y + +E+ + S +E
Sbjct: 15 KNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNE 53
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -2
Query: 376 KNVQVSSLLSDMEKIKQELIKNNEYEKLKEKCRRSDSDE 260
KN + L ++ EK+ +E N Y + +E+ + S +E
Sbjct: 15 KNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNE 53
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -2
Query: 376 KNVQVSSLLSDMEKIKQELIKNNEYEKLKEKCRRSDSDE 260
KN + L ++ EK+ +E N Y + +E+ + S +E
Sbjct: 15 KNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNE 53
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -2
Query: 376 KNVQVSSLLSDMEKIKQELIKNNEYEKLKEKCRRSDSDE 260
KN + L ++ EK+ +E N Y + +E+ + S +E
Sbjct: 15 KNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNE 53
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 3.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 383 QTQKRPSQQSAQRHGENKTGTHQEQRV*ETQGEMQ 279
Q Q++P QQS Q + Q+Q+ + Q + Q
Sbjct: 1512 QQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQ 1546
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 5.1
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = -3
Query: 639 QLDHQKRIIAKSVRKKKGDREDPSENSSHGMHDDNVPK 526
++ +K K K RE+P G H D+ PK
Sbjct: 310 RIQMRKNRFQKIAESMKTARENPGPPGVPGDHGDHAPK 347
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 5.1
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = -3
Query: 639 QLDHQKRIIAKSVRKKKGDREDPSENSSHGMHDDNVPK 526
++ +K K K RE+P G H D+ PK
Sbjct: 310 RIQMRKNRFQKIAESMKTARENPGPPGVPGDHGDHAPK 347
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.6 bits (46), Expect = 5.1
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = -3
Query: 639 QLDHQKRIIAKSVRKKKGDREDPSENSSHGMHDDNVPK 526
++ +K K K RE+P G H D+ PK
Sbjct: 249 RIQMRKNRFQKIAESMKTARENPGPPGVPGDHGDHAPK 286
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,013
Number of Sequences: 438
Number of extensions: 3888
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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