Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0349.Seq
(444 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542223-1|CAG47019.1| 113|Homo sapiens GC20 protein. 48 1e-05
BC006996-1|AAH06996.1| 113|Homo sapiens eukaryotic translation ... 48 1e-05
AK223448-1|BAD97168.1| 113|Homo sapiens translation factor sui1... 48 1e-05
AF263452-1|AAF79182.1| 113|Homo sapiens translational factor eI... 48 1e-05
AF064607-1|AAC17112.1| 113|Homo sapiens GC20 protein protein. 48 1e-05
L26247-1|AAA60602.1| 113|Homo sapiens sui1iso1 protein. 46 4e-05
CR457051-1|CAG33332.1| 113|Homo sapiens SUI1 protein. 46 4e-05
BT006645-1|AAP35291.1| 113|Homo sapiens putative translation in... 46 4e-05
BC008710-1|AAH08710.1| 113|Homo sapiens eukaryotic translation ... 46 4e-05
BC005118-1|AAH05118.1| 113|Homo sapiens eukaryotic translation ... 46 4e-05
AJ012375-1|CAD66615.1| 113|Homo sapiens SUI1 protein protein. 46 4e-05
AF100737-1|AAD19900.1| 113|Homo sapiens putative translation in... 46 4e-05
AF083441-1|AAD52028.1| 113|Homo sapiens SUI1 isolog protein. 46 4e-05
BC016048-1|AAH16048.1| 317|Homo sapiens LRRC38 protein protein. 29 7.2
AL603749-2|CAH70436.1| 294|Homo sapiens leucine rich repeat con... 29 7.2
AL354712-1|CAI21926.1| 294|Homo sapiens leucine rich repeat con... 29 7.2
>CR542223-1|CAG47019.1| 113|Homo sapiens GC20 protein.
Length = 113
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +2
Query: 2 GDQRENICQWLTKSGLVKPEQLKVHGF 82
GDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 87 GDQRKNICQFLLEVGIVKEEQLKVHGF 113
>BC006996-1|AAH06996.1| 113|Homo sapiens eukaryotic translation
initiation factor 1B protein.
Length = 113
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +2
Query: 2 GDQRENICQWLTKSGLVKPEQLKVHGF 82
GDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 87 GDQRKNICQFLLEVGIVKEEQLKVHGF 113
>AK223448-1|BAD97168.1| 113|Homo sapiens translation factor sui1
homolog protein.
Length = 113
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +2
Query: 2 GDQRENICQWLTKSGLVKPEQLKVHGF 82
GDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 87 GDQRKNICQFLLEVGIVKEEQLKVHGF 113
>AF263452-1|AAF79182.1| 113|Homo sapiens translational factor eIF-1
protein.
Length = 113
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +2
Query: 2 GDQRENICQWLTKSGLVKPEQLKVHGF 82
GDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 87 GDQRKNICQFLLEVGIVKEEQLKVHGF 113
>AF064607-1|AAC17112.1| 113|Homo sapiens GC20 protein protein.
Length = 113
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +2
Query: 2 GDQRENICQWLTKSGLVKPEQLKVHGF 82
GDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 87 GDQRKNICQFLLEVGIVKEEQLKVHGF 113
>L26247-1|AAA60602.1| 113|Homo sapiens sui1iso1 protein.
Length = 113
Score = 46.4 bits (105), Expect = 4e-05
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 2 GDQRENICQWLTKSGLVKPEQLKVHGF 82
GDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 87 GDQRKNICQFLVEIGLAKDDQLKVHGF 113
>CR457051-1|CAG33332.1| 113|Homo sapiens SUI1 protein.
Length = 113
Score = 46.4 bits (105), Expect = 4e-05
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 2 GDQRENICQWLTKSGLVKPEQLKVHGF 82
GDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 87 GDQRKNICQFLVEIGLAKDDQLKVHGF 113
>BT006645-1|AAP35291.1| 113|Homo sapiens putative translation
initiation factor protein.
Length = 113
Score = 46.4 bits (105), Expect = 4e-05
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 2 GDQRENICQWLTKSGLVKPEQLKVHGF 82
GDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 87 GDQRKNICQFLVEIGLAKDDQLKVHGF 113
>BC008710-1|AAH08710.1| 113|Homo sapiens eukaryotic translation
initiation factor 1 protein.
Length = 113
Score = 46.4 bits (105), Expect = 4e-05
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 2 GDQRENICQWLTKSGLVKPEQLKVHGF 82
GDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 87 GDQRKNICQFLVEIGLAKDDQLKVHGF 113
>BC005118-1|AAH05118.1| 113|Homo sapiens eukaryotic translation
initiation factor 1 protein.
Length = 113
Score = 46.4 bits (105), Expect = 4e-05
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 2 GDQRENICQWLTKSGLVKPEQLKVHGF 82
GDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 87 GDQRKNICQFLVEIGLAKDDQLKVHGF 113
>AJ012375-1|CAD66615.1| 113|Homo sapiens SUI1 protein protein.
Length = 113
Score = 46.4 bits (105), Expect = 4e-05
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 2 GDQRENICQWLTKSGLVKPEQLKVHGF 82
GDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 87 GDQRKNICQFLVEIGLAKDDQLKVHGF 113
>AF100737-1|AAD19900.1| 113|Homo sapiens putative translation
initiation factor A121/Sui1 protein.
Length = 113
Score = 46.4 bits (105), Expect = 4e-05
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 2 GDQRENICQWLTKSGLVKPEQLKVHGF 82
GDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 87 GDQRKNICQFLVEIGLAKDDQLKVHGF 113
>AF083441-1|AAD52028.1| 113|Homo sapiens SUI1 isolog protein.
Length = 113
Score = 46.4 bits (105), Expect = 4e-05
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 2 GDQRENICQWLTKSGLVKPEQLKVHGF 82
GDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 87 GDQRKNICQFLVEIGLAKDDQLKVHGF 113
>BC016048-1|AAH16048.1| 317|Homo sapiens LRRC38 protein protein.
Length = 317
Score = 29.1 bits (62), Expect = 7.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 320 NEIVNIPNSLFLFLYDIVFLNCCNNSI 400
N I IP F+F D+V+L+ NNS+
Sbjct: 89 NRIQRIPEDFFIFYGDLVYLDFRNNSL 115
>AL603749-2|CAH70436.1| 294|Homo sapiens leucine rich repeat
containing 38 protein.
Length = 294
Score = 29.1 bits (62), Expect = 7.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 320 NEIVNIPNSLFLFLYDIVFLNCCNNSI 400
N I IP F+F D+V+L+ NNS+
Sbjct: 66 NRIQRIPEDFFIFYGDLVYLDFRNNSL 92
>AL354712-1|CAI21926.1| 294|Homo sapiens leucine rich repeat
containing 38 protein.
Length = 294
Score = 29.1 bits (62), Expect = 7.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 320 NEIVNIPNSLFLFLYDIVFLNCCNNSI 400
N I IP F+F D+V+L+ NNS+
Sbjct: 66 NRIQRIPEDFFIFYGDLVYLDFRNNSL 92
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,805,106
Number of Sequences: 237096
Number of extensions: 1064438
Number of successful extensions: 1771
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1771
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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