Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0346.Seq
(707 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 25 0.70
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 24 1.6
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 24 1.6
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 24 1.6
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 24 1.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 1.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 1.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 24 1.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 1.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 1.6
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 24 1.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 24 1.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 2.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 2.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 2.1
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 2.1
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 2.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 2.1
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 2.8
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 5.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 5.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 5.0
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 6.6
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 21 8.7
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 21 8.7
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.7
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.7
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 8.7
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 8.7
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 8.7
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 8.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.7
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.70
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +1
Query: 274 TIVKLQEESRLNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEI 453
T V+++ ++ +NPE + L TGE KP I + +K + + + +LV I
Sbjct: 146 TTVEVKRDT-INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIEEHDTVLVVNI 200
Query: 454 MRAGMSSLK 480
++G S K
Sbjct: 201 KKSGNESKK 209
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.8 bits (49), Expect = 1.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 144 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKK 198
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.8 bits (49), Expect = 1.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 144 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKK 198
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.8 bits (49), Expect = 1.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 155 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKK 209
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 155 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKK 209
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 155 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKK 209
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 155 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKK 209
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 155 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKK 209
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.8 bits (49), Expect = 1.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 144 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKK 198
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.8 bits (49), Expect = 1.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 155 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKK 209
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.8 bits (49), Expect = 1.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 155 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKK 209
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.8 bits (49), Expect = 1.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 155 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKK 209
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.4 bits (48), Expect = 2.1
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 155 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKK 209
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 2.1
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 155 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKK 209
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 2.1
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 155 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKK 209
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.4 bits (48), Expect = 2.1
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 160 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKK 214
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.4 bits (48), Expect = 2.1
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 155 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIEEHDTVLVVNIEKSGNESKK 209
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.1
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 155 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKK 209
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.4 bits (48), Expect = 2.1
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP I + +K + + + +LV I ++G S K
Sbjct: 155 INPEDVILIRRTGEGSKP----IFEREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKK 209
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 2.8
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 480
+NPE + L TGE KP + + +K + + + +LV I ++G S K
Sbjct: 155 INPEDVILIRRTGEGSKP----LFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKK 209
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.2 bits (45), Expect = 5.0
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -3
Query: 186 LPLTVSLYFSSSVLALISKAAAPGMTHLSSMALLIARRPSRTASLIC--VNVCLLGA 22
L ++ S + + AL+SK + M H+ + L A ++C V ++GA
Sbjct: 246 LSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMCQPVGTLIVGA 302
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKP 357
+NPE + L TGE KP
Sbjct: 152 INPEDVMLKRRTGEGSKP 169
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKP 357
+NPE + L TGE KP
Sbjct: 152 INPEDVMLKRRTGEGSKP 169
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKP 357
+NPE + L TGE KP
Sbjct: 152 INPEDVMLKRRTGEGSKP 169
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKP 357
+NPE + L TGE KP
Sbjct: 152 INPEDVMLKRRTGEGSKP 169
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKP 357
+NPE + L TGE KP
Sbjct: 152 INPEDVMLKRRTGEGSKP 169
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKP 357
+NPE + L TGE KP
Sbjct: 152 INPEDVMLKRRTGEGSKP 169
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKP 357
+NPE + L TGE KP
Sbjct: 152 INPEDVMLKRRTGEGSKP 169
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 304 LNPEPIGLDLSTGEAFKP 357
+NPE + L TGE KP
Sbjct: 152 INPEDVMLKRRTGEGSKP 169
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 6.6
Identities = 5/18 (27%), Positives = 10/18 (55%)
Frame = -2
Query: 628 CNQNCEVSVDCNKTILHK 575
CN+ C +DC ++ +
Sbjct: 474 CNKRCNCDIDCINRVVQR 491
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/21 (28%), Positives = 11/21 (52%)
Frame = -3
Query: 72 PSRTASLICVNVCLLGASCRI 10
P+ +C+ +C G CR+
Sbjct: 55 PNVVPKPLCIKICAPGCVCRL 75
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/21 (28%), Positives = 11/21 (52%)
Frame = -3
Query: 72 PSRTASLICVNVCLLGASCRI 10
P+ +C+ +C G CR+
Sbjct: 55 PNVVPKPLCIKICAPGCVCRL 75
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 613 RSSDYKLNQSFTNNLTKLNNFHY 681
RS + K+ S +NN NN+ Y
Sbjct: 74 RSREPKIISSLSNNTIHNNNYKY 96
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 613 RSSDYKLNQSFTNNLTKLNNFHY 681
RS + K+ S +NN NN+ Y
Sbjct: 74 RSREPKIISSLSNNTIHNNNYKY 96
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 613 RSSDYKLNQSFTNNLTKLNNFHY 681
RS + K+ S +NN NN+ Y
Sbjct: 75 RSREPKIISSLSNNTIHNNNYKY 97
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 613 RSSDYKLNQSFTNNLTKLNNFHY 681
RS + K+ S +NN NN+ Y
Sbjct: 75 RSREPKIISSLSNNTIHNNNYKY 97
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 613 RSSDYKLNQSFTNNLTKLNNFHY 681
RS + K+ S +NN NN+ Y
Sbjct: 75 RSREPKIISSLSNNTIHNNNYKY 97
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 613 RSSDYKLNQSFTNNLTKLNNFHY 681
RS + K+ S +NN NN+ Y
Sbjct: 75 RSREPKIISSLSNNTIHNNNYKY 97
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/41 (24%), Positives = 16/41 (39%)
Frame = +3
Query: 393 ETNIEFLFSDRKQPPPCRRDYESRNEQPQRIIINKCFILGH 515
+ E R +PP R+ + QP + KC G+
Sbjct: 380 QATAELKLGGRFEPPQIRQAFAEETLQPGPSMFLKCVASGN 420
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,416
Number of Sequences: 438
Number of extensions: 3669
Number of successful extensions: 56
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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