Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0343.Seq
(556 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-... 164 1e-39
UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4; Eukary... 154 2e-36
UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47; Eutel... 152 5e-36
UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1; ... 145 7e-34
UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4; Eukary... 137 2e-31
UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=... 130 3e-29
UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13; Eukaryota... 116 5e-25
UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal ... 110 2e-23
UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of cy... 101 1e-20
UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42; Euka... 100 5e-20
UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6; ... 98 1e-19
UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative; ... 98 1e-19
UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177, w... 95 1e-18
UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative; ... 95 1e-18
UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea... 90 3e-17
UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4; Peziz... 87 3e-16
UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostel... 82 1e-14
UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;... 77 3e-13
UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lambl... 73 3e-12
UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2; ... 73 5e-12
UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal ... 60 3e-08
UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1; Enceph... 51 2e-05
UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5; Therm... 47 3e-04
UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1; ... 43 0.006
UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2; Archa... 41 0.022
UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2; Desul... 40 0.029
UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofil... 39 0.090
UniRef50_Q98SD1 Cluster: 60S ribosomal protein 35A; n=1; Guillar... 35 1.1
UniRef50_Q012X7 Cluster: Phytoene/squalene synthetase; n=2; Ostr... 35 1.1
UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal ... 35 1.5
UniRef50_Q1DC14 Cluster: Major facilitator family transporter; n... 34 1.9
UniRef50_Q14P27 Cluster: Hypothetical drug/sodium antiporter ext... 33 3.4
UniRef50_UPI0000382718 Cluster: COG0582: Integrase; n=1; Magneto... 33 4.5
UniRef50_Q8KW95 Cluster: RB147; n=1; Ruegeria sp. PR1b|Rep: RB14... 33 4.5
UniRef50_Q7D3N7 Cluster: AGR_pAT_277p; n=2; Agrobacterium tumefa... 33 5.9
UniRef50_A4ALM4 Cluster: Phage-related integrase; n=1; marine ac... 32 7.8
>UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA
- Drosophila melanogaster (Fruit fly)
Length = 157
Score = 164 bits (398), Expect = 1e-39
Identities = 73/109 (66%), Positives = 89/109 (81%)
Frame = +3
Query: 156 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIP 335
RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ SFY GK CVYVY+A+ + +P
Sbjct: 46 RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVP 105
Query: 336 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
P +KT++RA+WGKVTR HGN+G+VRA+F NLP AMGHRIR+MLY
Sbjct: 106 QHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIMLY 153
>UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4;
Eukaryota|Rep: Clone ZZZ247 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 128
Score = 154 bits (373), Expect = 2e-36
Identities = 72/109 (66%), Positives = 82/109 (75%)
Frame = +3
Query: 156 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIP 335
R GRLY KA FTGY+RGLRNQHE+TALL+++G FY GK CVYVYRA+K+ P
Sbjct: 18 RPGRLYVKATFTGYRRGLRNQHESTALLRIDGVTERKSTEFYLGKRCVYVYRAEKKKVFP 77
Query: 336 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
R K TK+R IWGK+ RPHGNSG VRA+FK NLPA AMG RIRVMLY
Sbjct: 78 --RRQKPTKIRVIWGKIMRPHGNSGIVRARFKHNLPASAMGKRIRVMLY 124
>UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47;
Euteleostomi|Rep: 60S ribosomal protein L35a - Homo
sapiens (Human)
Length = 110
Score = 152 bits (369), Expect = 5e-36
Identities = 72/107 (67%), Positives = 81/107 (75%)
Frame = +3
Query: 162 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGG 341
GRL++KA+F GYKRGLRNQ E+TALLK+EG FY GK C YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 342 PRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
GK K R IWGKVTR HGNSG VRAKF+SNLPA+A+GHRIRVMLY
Sbjct: 62 --GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLY 106
>UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1;
Diaphorina citri|Rep: Putative ribosomal protein L35Ae -
Diaphorina citri (Asian citrus psyllid)
Length = 172
Score = 145 bits (351), Expect = 7e-34
Identities = 68/114 (59%), Positives = 84/114 (73%)
Frame = +3
Query: 141 KASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKK 320
K + RHGRLYA+A+FTG+KRG RNQH NT+LL +E T FY GK CV++Y+AK
Sbjct: 57 KRLRLRHGRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKT 116
Query: 321 RTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
+ P R K++LRAIWGKVTRPHG+SGSVRAKF NLPA MG ++R+MLY
Sbjct: 117 KELKPHSKR--KSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLY 168
>UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4;
Eukaryota|Rep: 60S ribosomal protein L35a -
Caenorhabditis elegans
Length = 124
Score = 137 bits (331), Expect = 2e-31
Identities = 66/117 (56%), Positives = 82/117 (70%)
Frame = +3
Query: 132 VLRKASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYR 311
V R+ S P GRLY KA+FTG+KRGLR Q E+T+LLK+EG FYAGK VY+Y+
Sbjct: 6 VARRPSAPTTGRLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYK 65
Query: 312 AKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
A +T G T+ RAIWGK+TRPHGN+G+VRAKF N+P A+G RIRV+LY
Sbjct: 66 AHNKTLKTG--HTVATRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALGKRIRVLLY 120
>UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=1;
Ciona intestinalis|Rep: Putative 60S ribosomal protein
L35a - Ciona intestinalis (Transparent sea squirt)
Length = 122
Score = 130 bits (313), Expect = 3e-29
Identities = 61/97 (62%), Positives = 72/97 (74%)
Frame = +3
Query: 165 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGP 344
RL+ KAVFTGY RGLRNQHE+TALL++EG FY GK C YVY+AK++T P
Sbjct: 4 RLWCKAVFTGYTRGLRNQHEHTALLRIEGVTNKEDTDFYLGKKCAYVYKAKRKTKT---P 60
Query: 345 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAM 455
RG+ K R IWGKVTR HGNSG VRA FK+NLPA+A+
Sbjct: 61 RGEPNKTRVIWGKVTRSHGNSGVVRATFKTNLPAKAI 97
>UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13;
Eukaryota|Rep: Ribosomal protein L35A - Zea mays (Maize)
Length = 112
Score = 116 bits (278), Expect = 5e-25
Identities = 53/106 (50%), Positives = 72/106 (67%)
Frame = +3
Query: 165 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGP 344
RLY + GYKR NQ+E T+L+++EG T ++YAGK Y+Y+AK ++
Sbjct: 11 RLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS------ 64
Query: 345 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
+T+ R IWGKVTRPHGNSG VRAKFKSNLP ++MG ++RV +Y
Sbjct: 65 --SETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKVRVFMY 108
>UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal
protein L35a; n=7; Euarchontoglires|Rep: PREDICTED:
similar to ribosomal protein L35a - Mus musculus
Length = 86
Score = 110 bits (265), Expect = 2e-23
Identities = 54/84 (64%), Positives = 59/84 (70%)
Frame = +3
Query: 231 ALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSG 410
ALLK+EG FY GK C YVY+AK T PGG K K R IWGKVTR HGNS
Sbjct: 2 ALLKIEGVYARDETEFYLGKRCAYVYKAKNNTMTPGG---KLNKTRMIWGKVTRAHGNSS 58
Query: 411 SVRAKFKSNLPAQAMGHRIRVMLY 482
VRAKF+SNLPA+A+GHRIRVMLY
Sbjct: 59 MVRAKFRSNLPAKAIGHRIRVMLY 82
>UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L35a, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 109
Score = 101 bits (241), Expect = 1e-20
Identities = 49/106 (46%), Positives = 66/106 (62%)
Frame = +3
Query: 165 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGP 344
RLY + + GYKR NQ+ +T+L+K+EG +FY GK YVY+AK +
Sbjct: 8 RLYVRGLILGYKRARTNQYNHTSLIKLEGVSDAPSTAFYGGKKLCYVYKAKTKK------ 61
Query: 345 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
+ T R IWGKV R HG SG VRAKFKS+LP+ ++G ++R MLY
Sbjct: 62 --QGTAYRTIWGKVMRAHGTSGVVRAKFKSHLPSNSIGGKVRCMLY 105
>UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42;
Eukaryota|Rep: 60S ribosomal protein L33-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 107
Score = 99.5 bits (237), Expect = 5e-20
Identities = 50/106 (47%), Positives = 63/106 (59%)
Frame = +3
Query: 165 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGP 344
RLY K Y+R R + N +L+K+EG T FY GK YVYRA K
Sbjct: 6 RLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEV------ 59
Query: 345 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
RG +K+R +WGKVTR HGNSG VRA F++NLPA+ G +R+ LY
Sbjct: 60 RG--SKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLY 103
>UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein l35a, putative -
Leishmania major
Length = 144
Score = 98.3 bits (234), Expect = 1e-19
Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Frame = +3
Query: 165 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAK--KRTPIPG 338
RLY K GY RGL Q + TAL++VE T ++Y GK YVY K KR
Sbjct: 32 RLYMKGTLAGYTRGLHGQTKQTALVRVENVNTREDATWYVGKRVCYVYHGKKVKRCVRWS 91
Query: 339 GPRGKKTKLRAIWGKVTRPHGNSGSVRAKFK-SNLPAQAMGHRIRVMLY 482
+++ RA+WG+VTRPHGN+G +R KF +++PA A+G RIRV LY
Sbjct: 92 KAPARRSTTRALWGRVTRPHGNAGMMRVKFNGASVPASAIGRRIRVYLY 140
>UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative;
n=5; Plasmodium|Rep: 60S ribosomal protein L33-B,
putative - Plasmodium vivax
Length = 146
Score = 97.9 bits (233), Expect = 1e-19
Identities = 46/106 (43%), Positives = 60/106 (56%)
Frame = +3
Query: 165 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGP 344
RLY K V GYKR RNQ N L+ + T FY GK YVYR K
Sbjct: 45 RLYEKGVILGYKRSQRNQDPNFTLISIRNVHTKKHAQFYVGKKIAYVYRTNKHHD----- 99
Query: 345 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
K++ IWGKV R HGNSG +RA+F++N+P +A G R+R+++Y
Sbjct: 100 ---GVKIKCIWGKVCRTHGNSGVIRARFRTNIPPKAFGDRVRILMY 142
>UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=9; Eukaryota|Rep:
Chromosome undetermined scaffold_177, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 129
Score = 95.1 bits (226), Expect = 1e-18
Identities = 47/106 (44%), Positives = 64/106 (60%)
Frame = +3
Query: 165 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGP 344
RL+ KAVFTG++R Q+EN ALLK+E V FY GK Y+Y+A
Sbjct: 28 RLWVKAVFTGFRRSKVQQNENQALLKIEHVNDVASSRFYWGKRVAYIYKAHSLK------ 81
Query: 345 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
TK RAIWG++++ HG++G V A+F NLP +A+G +RV LY
Sbjct: 82 --NNTKFRAIWGRISKSHGSNGVVTARFGRNLPPRAIGSTLRVFLY 125
>UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative;
n=2; Filobasidiella neoformans|Rep: 60s ribosomal
protein l33-b, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 178
Score = 95.1 bits (226), Expect = 1e-18
Identities = 46/106 (43%), Positives = 66/106 (62%)
Frame = +3
Query: 165 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGP 344
RLY K G+KRG RN N +LL++EG Y GK YVY+AK+ I G
Sbjct: 77 RLYIKGRILGHKRGKRNSRPNQSLLQIEGVDNKEAAGHYLGKRVAYVYKAKRE--ING-- 132
Query: 345 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
+++R IWG+++R HGNSG+V++KF++NLPA+ G R+ML+
Sbjct: 133 ----SRVRVIWGRISRSHGNSGAVKSKFRTNLPAKTFGASCRIMLF 174
>UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea
mays (Maize)
Length = 139
Score = 90.2 bits (214), Expect = 3e-17
Identities = 43/85 (50%), Positives = 58/85 (68%)
Frame = +3
Query: 201 RGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWG 380
R NQ+E T+L+++EG T ++YAGK Y+Y+AK ++ +T+ R IWG
Sbjct: 43 RSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS--------SETRYRCIWG 94
Query: 381 KVTRPHGNSGSVRAKFKSNLPAQAM 455
KVTRPHGNSG VRAKFKSNLP ++M
Sbjct: 95 KVTRPHGNSGVVRAKFKSNLPPESM 119
>UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L35Ae -
Aspergillus fumigatus (Sartorya fumigata)
Length = 119
Score = 86.6 bits (205), Expect = 3e-16
Identities = 42/95 (44%), Positives = 61/95 (64%)
Frame = +3
Query: 198 KRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIW 377
++G+ + +L+K++G + +FY GK +VYRAK+ RG + +R IW
Sbjct: 29 RQGIWEADTSYSLIKIDGVDSTEAANFYLGKKVAFVYRAKREV------RG--SNIRVIW 80
Query: 378 GKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
GKVTRPHGNSG VRA+F+ NLP ++ G +RVMLY
Sbjct: 81 GKVTRPHGNSGVVRAQFRHNLPPKSFGATVRVMLY 115
>UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L35a -
Dictyostelium discoideum AX4
Length = 105
Score = 81.8 bits (193), Expect = 1e-14
Identities = 42/106 (39%), Positives = 60/106 (56%)
Frame = +3
Query: 165 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGP 344
++Y+K V GY+R Q+ N +L+K+EG + +FY GK V + K P
Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAK---NP 59
Query: 345 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
G K WGK+ + HG+SG V+A+F NLP +AMG +RVMLY
Sbjct: 60 TGHKIS----WGKICKTHGSSGVVQARFARNLPPKAMGAPVRVMLY 101
>UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L35Ae,
putative - Trichomonas vaginalis G3
Length = 102
Score = 77.0 bits (181), Expect = 3e-13
Identities = 42/106 (39%), Positives = 59/106 (55%)
Frame = +3
Query: 165 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGP 344
+L+ A F ++R R N ALL+++G + FYAGK V++ K+ I
Sbjct: 6 KLFVPATFVSFRRSKRIIKPNQALLEIQGVVSKEEAQFYAGKKVASVWKFDKQEFIN--- 62
Query: 345 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
WG +T+PHGNSG VRAKF+ NLP Q +G ++RVMLY
Sbjct: 63 ----------WGVITQPHGNSGVVRAKFEKNLPPQMLGKQVRVMLY 98
>UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_479_47445_47074 - Giardia lamblia
ATCC 50803
Length = 123
Score = 73.3 bits (172), Expect = 3e-12
Identities = 41/104 (39%), Positives = 56/104 (53%)
Frame = +3
Query: 162 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGG 341
G+ + A+F GY+R Q EN AL+KV G T G+ + + +K PI
Sbjct: 6 GKTFLPAIFVGYQRSRAKQRENVALVKVSGIYTRAETDKVLGR-LIAIIHSKSGKPI--- 61
Query: 342 PRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRV 473
+GK+ RPHGNSG VRA+F +NLP Q MGH++RV
Sbjct: 62 -----------FGKICRPHGNSGMVRARFYTNLPGQLMGHKVRV 94
>UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 102
Score = 72.9 bits (171), Expect = 5e-12
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Frame = +3
Query: 159 HG-RLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIP 335
HG RLY K Y+RG R + NT+L+K+EG + + +FY GK +VYRAK+
Sbjct: 5 HGHRLYVKGRHLSYQRGKRATNPNTSLIKLEGVEDIKAANFYLGKKVAFVYRAKREV--- 61
Query: 336 GGPRGKKTKLRAIWGKVTRPHGNSG----SVRAKFKSNLPA 446
+ +K+R IWGKVTR HG G +++ +F S P+
Sbjct: 62 -----QGSKIRVIWGKVTRTHGQLGRCPCAIQTQFFSQSPS 97
>UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein L35a - Macaca mulatta
Length = 80
Score = 60.5 bits (140), Expect = 3e-08
Identities = 45/107 (42%), Positives = 56/107 (52%)
Frame = +3
Query: 162 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGG 341
GRL++KAVF GYKRG RNQ E + +++ YAG + Y KK
Sbjct: 3 GRLWSKAVFAGYKRGPRNQR--------EHTALLKIEAVYAGDETEF-YLDKKA------ 47
Query: 342 PRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
HGNSG VRAKF+SNLPA+A+GH I+VMLY
Sbjct: 48 ------------------HGNSGMVRAKFQSNLPAKAIGHGIQVMLY 76
>UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L35A
- Encephalitozoon cuniculi
Length = 113
Score = 50.8 bits (116), Expect = 2e-05
Identities = 33/101 (32%), Positives = 45/101 (44%)
Frame = +3
Query: 180 AVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGPRGKKT 359
A F +KRG R H LLK+ + S Y G V + + P
Sbjct: 18 ATFVSFKRGQRRLHPRHVLLKIRNVTSKDEASSYVGNGVVCYKKNNEGERYP-------- 69
Query: 360 KLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 482
+ G +TR HGNSG+VRA+F NL + +G + V LY
Sbjct: 70 ----VHGVITRIHGNSGAVRARFTRNLDPKLLGTHVFVKLY 106
>UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L35Ae -
Pyrococcus abyssi
Length = 87
Score = 46.8 bits (106), Expect = 3e-04
Identities = 30/100 (30%), Positives = 45/100 (45%)
Frame = +3
Query: 177 KAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGPRGKK 356
K V Y+R NQH N ++K + S G+ ++ P GK
Sbjct: 4 KGVVLSYRRSKENQHTNVMIIKPLNVNSREEASKLIGRLVIWK-----------SPSGKL 52
Query: 357 TKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVM 476
K GK+ R HG G+VRA+F+ LP QA+G + ++
Sbjct: 53 LK-----GKIVRVHGTKGAVRARFEKGLPGQALGDYVEII 87
>UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 225
Score = 42.7 bits (96), Expect = 0.006
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = -3
Query: 455 HSLGREVRLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSVHIDAMLASIK 276
H LGR++ LELGSD V + +G LAP +T++ L V + LA+I
Sbjct: 60 HGLGRQIGLELGSDNTTVTVRSGDLAPXATKVRSVLLH--------LGLVDVRHSLAAIP 111
Query: 275 RLHHYGLCSFNLEESGVLVLV 213
R G+ +F+L++ GV +LV
Sbjct: 112 RHLLLGVHAFDLDQRGVGILV 132
>UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2;
Archaea|Rep: 50S ribosomal protein L35Ae - Methanopyrus
kandleri
Length = 90
Score = 40.7 bits (91), Expect = 0.022
Identities = 26/97 (26%), Positives = 44/97 (45%)
Frame = +3
Query: 177 KAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGPRGKK 356
+ V Y+ G Q +++ EG ++ + GK ++ + P G
Sbjct: 6 RGVIVNYRMGRHTQDPRQCIIEFEGVESRSEAAQLIGKEVIWKH------PETG------ 53
Query: 357 TKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 467
+ I GKV HGN+G+VR +F+ LP QA+G +
Sbjct: 54 ---KVIRGKVVDTHGNNGAVRVRFERGLPGQALGTEV 87
>UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L35Ae -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 106
Score = 40.3 bits (90), Expect = 0.029
Identities = 31/103 (30%), Positives = 44/103 (42%)
Frame = +3
Query: 165 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGP 344
R+Y + GY+ G Q+E L++V+G S G +Y
Sbjct: 7 RVYT-GIILGYRLGSNTQYEKQVLIRVDGVNDRASASRLIGWKVLY-------------R 52
Query: 345 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRV 473
GK + R GK+ HG+ G V A FK NLP QA G + +
Sbjct: 53 DGKGNEYR---GKIVHVHGSKGVVIAVFKPNLPGQARGGNVYI 92
>UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L35Ae - Thermofilum
pendens (strain Hrk 5)
Length = 85
Score = 38.7 bits (86), Expect = 0.090
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 378 GKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVM 476
GK+ R HG G V A FK +LP QA+G +++++
Sbjct: 53 GKIVRMHGRRGHVLAYFKRHLPGQAVGTKVKIV 85
>UniRef50_Q98SD1 Cluster: 60S ribosomal protein 35A; n=1; Guillardia
theta|Rep: 60S ribosomal protein 35A - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 35.1 bits (77), Expect = 1.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 177 KAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGK 290
K VF GYKR +RNQ + A +K+ K + + + GK
Sbjct: 13 KCVFLGYKRSIRNQKMDKARMKINCQKNIEIHKQFLGK 50
>UniRef50_Q012X7 Cluster: Phytoene/squalene synthetase; n=2;
Ostreococcus|Rep: Phytoene/squalene synthetase -
Ostreococcus tauri
Length = 437
Score = 35.1 bits (77), Expect = 1.1
Identities = 29/108 (26%), Positives = 49/108 (45%)
Frame = -3
Query: 485 KIQHHSYSVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSV 306
+++H S+ + +GR+V LELG A + HLAPD ++ L V
Sbjct: 336 RVKHASHLTADRVGRQVLLELGPHDAARPVRPSHLAPDRSERRPLLL--------RLRLV 387
Query: 305 HIDAMLASIKRLHHYGLCSFNLEESGVLVLVA*TTLISCEYGLCVQPA 162
H+ +L ++R + L++ V+VLV L++ VQ A
Sbjct: 388 HVAQLLTRVERGRRSIADALQLDQRRVVVLVRARALVTQNQPAHVQSA 435
>UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L35a - Rattus norvegicus
Length = 106
Score = 34.7 bits (76), Expect = 1.5
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +3
Query: 162 GRLYAKAVFTGYKR--GLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIP 335
GR KAV G+ G+R+ + + EG + K C YVY+AK P
Sbjct: 22 GRYTRKAVVQGHFSWLGVRSLKPKSTD-RAEGVYARDETELHLAKRCAYVYKAKISAVTP 80
Query: 336 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKF 428
G GK K R + GK P +G AKF
Sbjct: 81 G---GKTNKTRVVRGKQLGP--RNGLFCAKF 106
>UniRef50_Q1DC14 Cluster: Major facilitator family transporter; n=2;
Cystobacterineae|Rep: Major facilitator family
transporter - Myxococcus xanthus (strain DK 1622)
Length = 421
Score = 34.3 bits (75), Expect = 1.9
Identities = 20/81 (24%), Positives = 40/81 (49%)
Frame = -3
Query: 464 SVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSVHIDAMLA 285
S+S L + ++ G A++ +W G ++ +G A G + PLL +V + A L
Sbjct: 240 SMSDVLFKPFLVDAGFTAAQIGLWVGTWGTGASIVGSLAGGLLASRMPLLGAVGLTASLR 299
Query: 284 SIKRLHHYGLCSFNLEESGVL 222
I + + L + + ++GV+
Sbjct: 300 VIPLVGRWLLATGGVTDAGVI 320
>UniRef50_Q14P27 Cluster: Hypothetical drug/sodium antiporter
extrusion transmembrane protein; n=1; Spiroplasma
citri|Rep: Hypothetical drug/sodium antiporter extrusion
transmembrane protein - Spiroplasma citri
Length = 532
Score = 33.5 bits (73), Expect = 3.4
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = -3
Query: 365 QLGF--FATGTSGNWCPLLSSVHIDAMLASIKRLHHYGLCSFNLEESGVLVLVA*TTLIS 192
+LGF F +LSS I ++ + YGL SF L S V +A T I+
Sbjct: 286 RLGFSSFINNLGAVLVSILSSAIISSLPGQFAQRQQYGLASFQLFNSAVSPWIAFFTAIA 345
Query: 191 CEYGLCVQPAVAGL*CFAKDLCGLHRSCWSSL 96
E ++ + G AK ++++CW L
Sbjct: 346 LEIAQGMK-TIIGYNYGAKKYLRMYQTCWYGL 376
>UniRef50_UPI0000382718 Cluster: COG0582: Integrase; n=1;
Magnetospirillum magnetotacticum MS-1|Rep: COG0582:
Integrase - Magnetospirillum magnetotacticum MS-1
Length = 328
Score = 33.1 bits (72), Expect = 4.5
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 174 AKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSFYAGKHCVYVYRAKKRTPIPGGPR-G 350
AKA+++ ++N+ +T L EG + S AG+ CV+ AK +P G +
Sbjct: 209 AKALWSIPASRMKNKRPHTVPLSREGLDIIGAVSARAGRECVF-GMAKVASPGSQGEKVS 267
Query: 351 KKTKLRAIWGKVTRPHGNSGSVRAK 425
K+ + RA G++ GN+ +RA+
Sbjct: 268 KEPRARANAGRLGVKPGNTECMRAR 292
>UniRef50_Q8KW95 Cluster: RB147; n=1; Ruegeria sp. PR1b|Rep: RB147 -
Ruegeria sp. PR1b
Length = 238
Score = 33.1 bits (72), Expect = 4.5
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -3
Query: 431 LELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSVHID-AMLASIKRLHHYG 258
L+ D + +G + Q FF +GTSG W LS+ D M + L H G
Sbjct: 177 LQAAVDACDFSKMSGRQRGEKDQSSFFTSGTSGGWREALSAAEADHIMTTCAEHLEHAG 235
>UniRef50_Q7D3N7 Cluster: AGR_pAT_277p; n=2; Agrobacterium
tumefaciens str. C58|Rep: AGR_pAT_277p - Agrobacterium
tumefaciens (strain C58 / ATCC 33970)
Length = 477
Score = 32.7 bits (71), Expect = 5.9
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 359 GFFATGTSGNWCPLLSSV-HIDAMLASIKRLHHYGLCSFNLEESGVLVLVA*TTLISCEY 183
G + W P ++ +I A L IK YGLC F L G+ L++ T L++ ++
Sbjct: 72 GLALSSVQAAWLPTAYAMTNISANLLLIKFRQQYGLCVFTLVALGLYALLSLTYLLTADH 131
Query: 182 GL 177
L
Sbjct: 132 WL 133
>UniRef50_A4ALM4 Cluster: Phage-related integrase; n=1; marine
actinobacterium PHSC20C1|Rep: Phage-related integrase -
marine actinobacterium PHSC20C1
Length = 333
Score = 32.3 bits (70), Expect = 7.8
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = -3
Query: 479 QHHS-YSVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQ 363
QH S +++ H+ + L+ G+D A +A+W GH +P +TQ
Sbjct: 255 QHISPHTLRHATAMHL-LQSGTDLATIALWLGHSSPATTQ 293
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,241,741
Number of Sequences: 1657284
Number of extensions: 10592405
Number of successful extensions: 28503
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 27718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28478
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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