Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0343.Seq
         (556 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14...    24   2.9  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   6.7  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       23   8.9  

>AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14A
           protein.
          Length = 365

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +3

Query: 144 ASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKTVMMQSF 278
           A  P++  + A+ V  GY +    QH + AL++++  + V M +F
Sbjct: 196 ADPPQNFGIEAQIVHPGYDKNGPYQHHDIALIRLD--RDVTMNNF 238


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 308 VHIDAMLASIKRLHHYGLCSFNLEES 231
           +H+  + A  KRL  Y  CS   E++
Sbjct: 363 IHLQRLSALAKRLRRYAECSKRKEQN 388


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -1

Query: 379 PQIARSLVFLPRGPPGIGVLFLALYT*TQCLP 284
           P   R+  F P GP G     + +   + C+P
Sbjct: 130 PMATRNRRFFPNGPEGPDSFDIPMMAKSHCMP 161


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,980
Number of Sequences: 2352
Number of extensions: 11136
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)