Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0340.Seq
         (770 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   2.0  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.7  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   6.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.2  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 370 WKLDNNISEVK 338
           WK DNN++E+K
Sbjct: 42  WKCDNNVAELK 52


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 370 WKLDNNISEVK 338
           WK DNN++E+K
Sbjct: 42  WKCDNNVAELK 52


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 225 FIIWIEVFYLFASSLISRDNLLYFV*SSRFCIQNFFI 335
           FII + V+Y + + +I   +LL+ +    F +  FF+
Sbjct: 107 FIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFL 143


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 28  TCPCSINFVASLIVSDILFRTINT 99
           TC     F A+  +S ILF   NT
Sbjct: 245 TCIAGYEFNANFTISYILFALFNT 268


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 279 LVISESS-QKDKRPRSK**IQDRVKCSTFGKTLPNWIDTDKMGS 151
           LV++ SS  K +  R    +  +V C  F  TL +  DT++ G+
Sbjct: 377 LVLTVSSVSKPEALRLSGSVVTKVTCELFQATLSSSSDTNRFGT 420


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 488 KNSRGGPYPIRPIVSRITIHWPSFYN 565
           KN+R  PYP++   S      P  YN
Sbjct: 261 KNNRASPYPMQRPKSASLSPPPHVYN 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,002
Number of Sequences: 336
Number of extensions: 4030
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)