Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0340.Seq
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    26   1.5  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.0  

>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 556 RRPVNCNTTHYRANWVRAPPRVFFLYKQKHY 464
           R+ VNC  T  R    ++P  + F +  KHY
Sbjct: 12  RQAVNCTATGRRCKQRKSPYTIDFEHYDKHY 42


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 8/39 (20%), Positives = 23/39 (58%)
 Frame = -2

Query: 379  FISWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRE 263
            ++  +L+N +S++++++   +  R D   +  +  D+RE
Sbjct: 3240 YLQKRLENGLSDLELLQSQAVANRSDMDWFGCMLEDLRE 3278


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 822,180
Number of Sequences: 2352
Number of extensions: 16586
Number of successful extensions: 19
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)