Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0340.Seq
(770 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071534-1|AAL49156.1| 181|Drosophila melanogaster RE57564p pro... 101 1e-21
AE013599-2494|AAF57847.2| 181|Drosophila melanogaster CG4866-PA... 101 1e-21
AY061327-1|AAL28875.1| 719|Drosophila melanogaster LD24749p pro... 30 4.0
AJ243916-1|CAB51032.1| 719|Drosophila melanogaster DOMINA prote... 30 4.0
AJ243814-1|CAB51073.1| 719|Drosophila melanogaster DOMINA prote... 30 4.0
AF264033-1|AAF91395.1| 719|Drosophila melanogaster winged-helix... 30 4.0
AE014297-1143|AAF54525.1| 719|Drosophila melanogaster CG4029-PA... 30 4.0
AB028890-1|BAA94598.1| 719|Drosophila melanogaster Winged-helix... 30 4.0
>AY071534-1|AAL49156.1| 181|Drosophila melanogaster RE57564p
protein.
Length = 181
Score = 101 bits (241), Expect = 1e-21
Identities = 46/60 (76%), Positives = 54/60 (90%)
Frame = -2
Query: 430 MVRKLKFHEGKLLKKVDFISWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELAKR 251
MVRKLKFHE KLLKKVDFI+WK+DN E K++++F IQKREDYTKYNKLSR+IRELA+R
Sbjct: 1 MVRKLKFHEQKLLKKVDFITWKVDNGGKENKILRRFHIQKREDYTKYNKLSREIRELAER 60
Score = 77.8 bits (183), Expect = 2e-14
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = -1
Query: 257 KKIKDLDPNNEFRTESSAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNK 78
++I LD + F+TE++ LL KL+ +G+ + L A +SAS FCRRRLPV+MV+ +
Sbjct: 59 ERIAKLDASEPFKTEATTMLLNKLHAMGVSNDQLTLETAAKISASHFCRRRLPVIMVKLR 118
Query: 77 MSETIKEATKFIEQGHV 27
MSE +K AT IE GHV
Sbjct: 119 MSEHLKAATDLIEHGHV 135
>AE013599-2494|AAF57847.2| 181|Drosophila melanogaster CG4866-PA
protein.
Length = 181
Score = 101 bits (241), Expect = 1e-21
Identities = 46/60 (76%), Positives = 54/60 (90%)
Frame = -2
Query: 430 MVRKLKFHEGKLLKKVDFISWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELAKR 251
MVRKLKFHE KLLKKVDFI+WK+DN E K++++F IQKREDYTKYNKLSR+IRELA+R
Sbjct: 1 MVRKLKFHEQKLLKKVDFITWKVDNGGKENKILRRFHIQKREDYTKYNKLSREIRELAER 60
Score = 77.8 bits (183), Expect = 2e-14
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = -1
Query: 257 KKIKDLDPNNEFRTESSAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNK 78
++I LD + F+TE++ LL KL+ +G+ + L A +SAS FCRRRLPV+MV+ +
Sbjct: 59 ERIAKLDASEPFKTEATTMLLNKLHAMGVSNDQLTLETAAKISASHFCRRRLPVIMVKLR 118
Query: 77 MSETIKEATKFIEQGHV 27
MSE +K AT IE GHV
Sbjct: 119 MSEHLKAATDLIEHGHV 135
>AY061327-1|AAL28875.1| 719|Drosophila melanogaster LD24749p
protein.
Length = 719
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 461 YVVFLLI*KKNSRGGPYPIRPIVSRITIHWPSFYNVVTG 577
Y + + KNSR G P+ I S + H+P F N +G
Sbjct: 416 YSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454
>AJ243916-1|CAB51032.1| 719|Drosophila melanogaster DOMINA protein
(WHN-homologue) protein.
Length = 719
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 461 YVVFLLI*KKNSRGGPYPIRPIVSRITIHWPSFYNVVTG 577
Y + + KNSR G P+ I S + H+P F N +G
Sbjct: 416 YSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454
>AJ243814-1|CAB51073.1| 719|Drosophila melanogaster DOMINA protein
protein.
Length = 719
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 461 YVVFLLI*KKNSRGGPYPIRPIVSRITIHWPSFYNVVTG 577
Y + + KNSR G P+ I S + H+P F N +G
Sbjct: 416 YSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454
>AF264033-1|AAF91395.1| 719|Drosophila melanogaster winged-helix
protein jumeaux protein.
Length = 719
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 461 YVVFLLI*KKNSRGGPYPIRPIVSRITIHWPSFYNVVTG 577
Y + + KNSR G P+ I S + H+P F N +G
Sbjct: 416 YSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454
>AE014297-1143|AAF54525.1| 719|Drosophila melanogaster CG4029-PA
protein.
Length = 719
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 461 YVVFLLI*KKNSRGGPYPIRPIVSRITIHWPSFYNVVTG 577
Y + + KNSR G P+ I S + H+P F N +G
Sbjct: 416 YSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454
>AB028890-1|BAA94598.1| 719|Drosophila melanogaster Winged-helix
nude transcriptionfactor protein.
Length = 719
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 461 YVVFLLI*KKNSRGGPYPIRPIVSRITIHWPSFYNVVTG 577
Y + + KNSR G P+ I S + H+P F N +G
Sbjct: 416 YSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,412,434
Number of Sequences: 53049
Number of extensions: 707492
Number of successful extensions: 1574
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1572
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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