Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0340.Seq
(770 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 25 0.78
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 25 0.78
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 24 1.8
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 23 4.2
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 23 4.2
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 4.2
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 22 7.3
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 7.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 7.3
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 22 7.3
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 22 7.3
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 25.0 bits (52), Expect = 0.78
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 424 RKLKFHEGKLLKKVDFISWKLDNNISEVKVMKKFCIQKREDYT 296
R L+ +G ++ + I W+L ++ V +M FCI K +T
Sbjct: 191 RTLQISDG--IENIGSIRWELAGTLAVVWIMCYFCIWKGVKWT 231
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 25.0 bits (52), Expect = 0.78
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 424 RKLKFHEGKLLKKVDFISWKLDNNISEVKVMKKFCIQKREDYT 296
R L+ +G ++ + I W+L ++ V +M FCI K +T
Sbjct: 244 RTLQISDG--IENIGSIRWELAGTLAVVWIMCYFCIWKGVKWT 284
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.8 bits (49), Expect = 1.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 236 PNNEFRTESSAQLLEKLYQIGLIPTR 159
P+N RT S+ LEKLY+ + R
Sbjct: 19 PSNLLRTSFSSAKLEKLYRASSLQQR 44
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 22.6 bits (46), Expect = 4.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -2
Query: 469 HYITYILVLGVPKMVRKLK 413
HY+ + LG+P R+L+
Sbjct: 293 HYVKIVYYLGIPSEARELQ 311
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 22.6 bits (46), Expect = 4.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -2
Query: 469 HYITYILVLGVPKMVRKLK 413
HY+ + LG+P R+L+
Sbjct: 308 HYVKIVYYLGIPSEARELQ 326
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.6 bits (46), Expect = 4.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 574 SHDVVKRRPVNCNTTHYRANWVRAP 500
S + K++P +C+T YR V P
Sbjct: 560 SDECNKKQPSDCDTLEYRNGEVTTP 584
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 490 FFLYKQKHYITYILVL 443
+FL+K K+ I Y LVL
Sbjct: 279 WFLHKMKNIIDYYLVL 294
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -2
Query: 319 IQKREDYTKYNKLSRDIRE 263
+++ E+Y Y KL R++R+
Sbjct: 392 VKQVEEYMAYRKLPREMRQ 410
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -2
Query: 319 IQKREDYTKYNKLSRDIRE 263
+++ E+Y Y KL R++R+
Sbjct: 360 VKQVEEYMAYRKLPREMRQ 378
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3
Query: 117 ERTGRDISGQGKIPSCRYQSNLVKFF 194
E TG D + C Y+ N KFF
Sbjct: 116 EYTGDDCQKTYQYVQCHYKQNPEKFF 141
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 4 LHYFRSHSTCPCSINFVASL 63
+ Y++S ST P + F+A L
Sbjct: 301 IKYYKSGSTVPFNFMFIADL 320
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,649
Number of Sequences: 438
Number of extensions: 4937
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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