Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0287.Seq
         (825 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   3.9  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.9  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    22   6.8  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   9.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 555 RCSNLRRVVIFLMKYVSTNVH 493
           +C NLRR+  F    ++ NVH
Sbjct: 49  KCYNLRRIYYFYCVSITFNVH 69


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 417 SNYANYNFAGFIFITRCYSFTVEVNREHLLRRISLEKLL 533
           S+Y N + A F F+ R     + +   HL +   +EK L
Sbjct: 413 SDYQNKSLAAFDFVARNSDTPIILWTSHLTQADVIEKYL 451


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 327 GGAAVVTIPETLELISQGGWRI 262
           G A ++   E +EL  +GGW++
Sbjct: 292 GEAGMLGYNEIVELQKEGGWKV 313


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 328 LQTETHYCFTAEIGRVVVPTRADLQEV 408
           +QT+      + +G+  +PT  DLQE+
Sbjct: 18  IQTKVREEILSVVGKEKIPTYNDLQEL 44


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 174 STELLILNFFFGQAH 218
           ST +++LN FF Q +
Sbjct: 7   STTMMVLNLFFSQMY 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,795
Number of Sequences: 336
Number of extensions: 4261
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)