Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0287.Seq
         (825 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   4.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   7.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   7.9  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   7.9  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 232 PLNIKWACPKKKLSIKSSV 176
           PLNI+W+ P +++   S V
Sbjct: 613 PLNIRWSYPGEEMGGSSGV 631


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 585 VLSVRPRRLPSF 620
           ++ +RP RLPSF
Sbjct: 816 IVGIRPERLPSF 827


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 585 VLSVRPRRLPSF 620
           ++ +RP RLPSF
Sbjct: 854 IVGIRPERLPSF 865


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 656 YLHHTXYADESLERWKSSWPN 594
           Y++HT  A++S      SW N
Sbjct: 176 YIYHTLVAEQSYGLTLPSWTN 196


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 656 YLHHTXYADESLERWKSSWPN 594
           Y++HT  A++S      SW N
Sbjct: 191 YIYHTLVAEQSYGLTLPSWTN 211


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 656 YLHHTXYADESLERWKSSWPN 594
           Y++HT  A++S      SW N
Sbjct: 79  YIYHTLVAEQSYGLTLPSWTN 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,723
Number of Sequences: 438
Number of extensions: 5326
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)