Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0285.Seq
         (982 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    68   3e-10
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    40   0.097
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ...    36   1.2  
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    36   1.6  
UniRef50_Q7PQF4 Cluster: ENSANGP00000011303; n=1; Anopheles gamb...    35   2.8  
UniRef50_Q01FM8 Cluster: Chromodomain-helicase-DNA-binding prote...    34   4.8  
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    34   4.8  
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    34   6.4  
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    34   6.4  
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    34   6.4  
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    34   6.4  
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    34   6.4  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 68.1 bits (159), Expect = 3e-10
 Identities = 37/62 (59%), Positives = 40/62 (64%)
 Frame = +2

Query: 281 SFLTATILVYXXXXXXXXXXXXRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAG 460
           SFLTA  L+Y            RLALQ  LVK FKV SF+L+GL RV Y YFSSLPPR G
Sbjct: 42  SFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPRVG 101

Query: 461 SG 466
           SG
Sbjct: 102 SG 103


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 39.9 bits (89), Expect = 0.097
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +1

Query: 409 PRKSPVSLFFVTTSPCREW 465
           PRKSPV LFFVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
           LRRG00114 - Rattus norvegicus (Rat)
          Length = 223

 Score = 36.3 bits (80), Expect = 1.2
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = +2

Query: 479 LLPSLDVVAVLRLPLTESNPDSP 547
           LLPSLDVVAV + P  E NPDSP
Sbjct: 167 LLPSLDVVAVSQAPSPELNPDSP 189


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 35.9 bits (79), Expect = 1.6
 Identities = 23/56 (41%), Positives = 28/56 (50%)
 Frame = +3

Query: 768 HWAGRFYNVVTGKNLGVXPT*SALQQIPLXAXWGNNEKGPXRWXFPKIGPXKWGMA 935
           HW   FYNVVTGK L + P   ALQ IPL      +E+        ++   KW MA
Sbjct: 5   HWPS-FYNVVTGKTLAL-PNLIALQHIPLSPAGVISEEARTDRPSQQLRSLKWRMA 58


>UniRef50_Q7PQF4 Cluster: ENSANGP00000011303; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000011303 - Anopheles gambiae
           str. PEST
          Length = 1361

 Score = 35.1 bits (77), Expect = 2.8
 Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
 Frame = +3

Query: 669 KLTTFXREGLRSIGFDSKGGPVXNSPY-SESYSIH-------WAGRFYNVVTGKNLGVXP 824
           ++ T  +E L   G  ++GG   + PY SESY I        WAG+ +NV T K   V  
Sbjct: 364 RIKTEAKERLAGGGRTARGGDDVHEPYESESYVIRDSKNKLAWAGQLHNVTTTKGAIVKM 423

Query: 825 T*SALQQIPLXAXWGNN 875
           T SA   +P+   W  N
Sbjct: 424 TCSANGPLPMF-KWQRN 439


>UniRef50_Q01FM8 Cluster: Chromodomain-helicase-DNA-binding protein
           6; n=2; Ostreococcus|Rep:
           Chromodomain-helicase-DNA-binding protein 6 -
           Ostreococcus tauri
          Length = 1390

 Score = 34.3 bits (75), Expect = 4.8
 Identities = 12/32 (37%), Positives = 24/32 (75%)
 Frame = +3

Query: 633 DHAICKSYPDSSKLTTFXREGLRSIGFDSKGG 728
           D A+C+SY +SS+L ++ +EG++ + F+ + G
Sbjct: 293 DDAVCESYGESSELRSYQKEGVKWMSFNFRAG 324


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 34.3 bits (75), Expect = 4.8
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +1

Query: 319 SWNYRGCWHQTCP 357
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19


>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 33.9 bits (74), Expect = 6.4
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = +2

Query: 785 LQRRDWEKPGGXPNLIRLAANPP 853
           LQRRDWE P G   L RLAA+PP
Sbjct: 72  LQRRDWENP-GVTQLNRLAAHPP 93


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 33.9 bits (74), Expect = 6.4
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = +2

Query: 785 LQRRDWEKPGGXPNLIRLAANPP 853
           LQRRDWE P G   L RLAA+PP
Sbjct: 26  LQRRDWENP-GVTQLNRLAAHPP 47


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 33.9 bits (74), Expect = 6.4
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = +2

Query: 785 LQRRDWEKPGGXPNLIRLAANPP 853
           LQRRDWE P G   L RLAA+PP
Sbjct: 30  LQRRDWENP-GVTQLNRLAAHPP 51


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 33.9 bits (74), Expect = 6.4
 Identities = 32/102 (31%), Positives = 44/102 (43%)
 Frame = +2

Query: 287 LTATILVYXXXXXXXXXXXXRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG 466
           LTATIL+Y            RLALQL   K+   +    +  +  PY   S         
Sbjct: 314 LTATILIYAIGAGITAAAGTRLALQLIFGKVLSSHHSNYKTKIW-PYIVIS--------- 363

Query: 467 *FARLLPSLDVVAVLRLPLTESNPDSPLPVTTMVVAETTIES 592
                L  L++ A+ + P  ESN +SPLPV  M+     I+S
Sbjct: 364 --CHYLSYLEL-AISQAPSPESNSNSPLPVKAMLGQYPNIKS 402


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 33.9 bits (74), Expect = 6.4
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = +2

Query: 785 LQRRDWEKPGGXPNLIRLAANPP 853
           LQRRDWE P G   L RLAA+PP
Sbjct: 12  LQRRDWENP-GVTQLNRLAAHPP 33


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 951,236,308
Number of Sequences: 1657284
Number of extensions: 19729946
Number of successful extensions: 37298
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 35944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37294
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 91856548575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)