Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0285.Seq
         (982 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0466 + 19403855-19404347,19404359-19404582,19404659-194050...    30   3.2  
10_08_0460 - 18098187-18098248,18098331-18098399,18098468-180994...    29   4.3  
01_05_0005 - 16886553-16886946,16887079-16887404                       29   7.5  
07_03_0749 + 21212463-21212911,21212976-21213305,21213336-212134...    28   9.9  

>12_02_0466 +
           19403855-19404347,19404359-19404582,19404659-19405093,
           19405180-19406024,19406353-19406635,19406903-19406977
          Length = 784

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 610 KCLPLSTFDGSFCDYHGCHG*RGIRVRFRKREPENGYHIQGRQQ 479
           K  P+   DG  C +H CH  R    +    +PE   H+ G ++
Sbjct: 727 KDFPIRQQDGDQCGFHVCHNMRSFAEKVTLLDPEVLMHVGGLER 770


>10_08_0460 -
           18098187-18098248,18098331-18098399,18098468-18099434,
           18100089-18100808,18100942-18101031,18101076-18101138,
           18101223-18101366,18101471-18101527,18101606-18101680,
           18101757-18101836,18101937-18102050,18102166-18102258,
           18102470-18102553,18102812-18102859,18105207-18105337,
           18105903-18106135
          Length = 1009

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 745 GELXTGPPLESKPIDRRPSRXKVVNFDESG*LLQIAWSSTGDAS 614
           GE    PP ++  +D  P+    +  D+S  +  I WS  GD S
Sbjct: 36  GEHNYEPPCDNNIVDASPAVWDALGLDKSVGMEHITWSDDGDES 79


>01_05_0005 - 16886553-16886946,16887079-16887404
          Length = 239

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = +1

Query: 208 RYAPQTCQYHRGCVHRSXAHKCNYELFNRNNFSIRYWSWNYRGC 339
           R A     Y   C       +C      R+N S RYW W   GC
Sbjct: 64  RDAAAVTAYREDCPFLDPGFQCISN--GRSNSSFRYWRWQPHGC 105


>07_03_0749 +
           21212463-21212911,21212976-21213305,21213336-21213436,
           21213758-21213883,21213962-21214083,21214177-21214450,
           21214767-21215004,21215101-21215248,21215400-21215732
          Length = 706

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +1

Query: 397 PITRPRKSPVSLFFVTTSPCREWVICAPAAFLGCGSRSQAPSYG 528
           P  RP+ S V +F +T           PA F G GS S +PS+G
Sbjct: 637 PNDRPQISSV-IFMLTRENMELQPPAQPAFFFGGGSASSSPSFG 679


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,883,950
Number of Sequences: 37544
Number of extensions: 562884
Number of successful extensions: 1017
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2858396560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)