Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0273.Seq
         (922 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC091472-1|AAH91472.1|  189|Homo sapiens UNQ501 protein protein.       42   0.004
BC064948-1|AAH64948.1|  189|Homo sapiens MBC3205 protein.              42   0.004
AY358949-1|AAQ89308.1|  189|Homo sapiens MBC3205 protein.              42   0.004

>BC091472-1|AAH91472.1|  189|Homo sapiens UNQ501 protein protein.
          Length = 189

 Score = 41.5 bits (93), Expect = 0.004
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = +2

Query: 170 GAQIWMTLVSGIVLYFSLPRHEFGRVQ 250
           G Q+W+T VSG +L+ SLPRH FG VQ
Sbjct: 24  GMQMWVTFVSGFLLFRSLPRHTFGLVQ 50


>BC064948-1|AAH64948.1|  189|Homo sapiens MBC3205 protein.
          Length = 189

 Score = 41.5 bits (93), Expect = 0.004
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = +2

Query: 170 GAQIWMTLVSGIVLYFSLPRHEFGRVQ 250
           G Q+W+T VSG +L+ SLPRH FG VQ
Sbjct: 24  GMQMWVTFVSGFLLFRSLPRHTFGLVQ 50


>AY358949-1|AAQ89308.1|  189|Homo sapiens MBC3205 protein.
          Length = 189

 Score = 41.5 bits (93), Expect = 0.004
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = +2

Query: 170 GAQIWMTLVSGIVLYFSLPRHEFGRVQ 250
           G Q+W+T VSG +L+ SLPRH FG VQ
Sbjct: 24  GMQMWVTFVSGFLLFRSLPRHTFGLVQ 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,240,485
Number of Sequences: 237096
Number of extensions: 2424405
Number of successful extensions: 9101
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9098
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)