Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0272.Seq
         (904 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    27   1.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.8  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   5.5  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 878 TXXSTRTPAPGPQV---RGHPXLXFAPPPMIXXSTDASPEFS 762
           T  STR P+PGP V           A PP I  S+   P++S
Sbjct: 435 TVRSTRAPSPGPIVYYPARETLPRLAQPPTITRSSSMFPDWS 476


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +1

Query: 778 ASVDXXIIGGGANXSXGCPRTCGPGAGVRVXFXVNGPGH 894
           AS+    +GGG+    G   + G G G+       G GH
Sbjct: 669 ASLGGGAVGGGSGAGGGAGSSGGSGGGLASGSPYGGGGH 707


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 569 STPYPAFVSHFLGGQDSGLMLHLTAELARQMGQKNLR 679
           ST  P F +HFLG Q    + H+     ++  Q+ L+
Sbjct: 538 STTAPIFHTHFLGYQPQMQLPHVEPFYRKEQQQQQLQ 574


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 910,802
Number of Sequences: 2352
Number of extensions: 18323
Number of successful extensions: 125
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)