Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0268.Seq
(886 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 70 3e-12
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 65 6e-11
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 64 2e-10
05_01_0103 + 686770-687017,687120-687270 62 6e-10
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 58 9e-09
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 56 3e-08
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 56 4e-08
03_06_0479 + 34217170-34217172,34217337-34217786 54 2e-07
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 44 2e-04
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 38 0.008
12_01_0696 + 5936869-5937068,5937705-5938179,5938240-5938665 31 1.6
11_02_0138 - 8708483-8709033,8709163-8709265,8709312-8709359,871... 29 6.6
07_03_0826 - 21774445-21774852,21776047-21776083,21776750-217768... 29 6.6
03_05_1112 + 30488678-30488806,30489047-30489228,30489310-304895... 28 8.7
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 69.7 bits (163), Expect = 3e-12
Identities = 33/74 (44%), Positives = 49/74 (66%)
Frame = +3
Query: 258 LFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQA 437
+FDF++ T E +K K+F +SW PDT++V+ KMLY+SS D K+ L G+Q +QA
Sbjct: 88 VFDFDFV-----TDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQA 142
Query: 438 TDLSEASQEAVEEK 479
TD SE S + V+ +
Sbjct: 143 TDPSEMSMDIVKSR 156
Score = 41.9 bits (94), Expect = 7e-04
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 237
ASG+ V D CK + E+K + R++VF I ++ +Q+ V+ +G+ Y+ F L
Sbjct: 24 ASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP--- 80
Query: 238 TGECR 252
ECR
Sbjct: 81 ADECR 85
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 65.3 bits (152), Expect = 6e-11
Identities = 30/79 (37%), Positives = 51/79 (64%)
Frame = +3
Query: 249 QIGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 428
+ ++DF++ T+E K ++F + W PD AKV+ KMLY+SS + KK L G+Q
Sbjct: 85 RFAIYDFDFL-----TAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 139
Query: 429 IQATDLSEASQEAVEEKLR 485
+QATD E S +A++++++
Sbjct: 140 VQATDAGEISLDALKDRVK 158
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 237
+SGV + D CK + E++ + HR++ F + ++ K+I V+ +G+R YE F L +
Sbjct: 24 SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPE-- 81
Query: 238 TGECR 252
G+CR
Sbjct: 82 -GDCR 85
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 63.7 bits (148), Expect = 2e-10
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = +3
Query: 294 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 473
T E +K K+F SW PDTA+ + KMLY+SS D ++ L G+Q IQATD SE S + +
Sbjct: 82 TDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIIR 141
Query: 474 EK 479
+
Sbjct: 142 AR 143
Score = 41.9 bits (94), Expect = 7e-04
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 67 GVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTG 243
G+ V+D CK ++E+K + R++VF I D+ +I VE +G+ YE F L
Sbjct: 13 GLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69
Query: 244 ECR 252
ECR
Sbjct: 70 ECR 72
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 62.1 bits (144), Expect = 6e-10
Identities = 27/71 (38%), Positives = 46/71 (64%)
Frame = +3
Query: 258 LFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQA 437
+FD+++ T E +K K+F ++W PDT++V+ KM+Y+SS D K+ L G+Q +QA
Sbjct: 62 IFDYDFV-----TEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQA 116
Query: 438 TDLSEASQEAV 470
TD +E + +
Sbjct: 117 TDPTEVGLDVI 127
Score = 39.1 bits (87), Expect = 0.005
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 70 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGE 246
+ V D CK + E+K + +R++++ I ++K+ + VE VGE Y+ F L E
Sbjct: 1 MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANE 57
Query: 247 CR 252
CR
Sbjct: 58 CR 59
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 58.0 bits (134), Expect = 9e-09
Identities = 28/68 (41%), Positives = 43/68 (63%)
Frame = +3
Query: 258 LFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQA 437
L+DF++ T E +K K+F ++W P T++++ KMLYS+S D +K+ L G IQA
Sbjct: 75 LYDFDFV-----TGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQA 129
Query: 438 TDLSEASQ 461
TD +E Q
Sbjct: 130 TDPTETPQ 137
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +3
Query: 258 LFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQ 422
+FDF++ T E +K K+F +SW PDT+KV+ KMLY+SS D K+ L G+Q
Sbjct: 333 VFDFDFV-----TDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQ 382
Score = 41.9 bits (94), Expect = 7e-04
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 237
ASG+ V D CK ++E+K + R++ F I + +Q+ V+ +G+ Y+ F +
Sbjct: 269 ASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP--- 325
Query: 238 TGECR 252
ECR
Sbjct: 326 ASECR 330
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 56.0 bits (129), Expect = 4e-08
Identities = 26/74 (35%), Positives = 45/74 (60%)
Frame = +3
Query: 258 LFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQA 437
++DF++ T E +K K+F ++W P ++++ KMLY++S + ++ L GV IQA
Sbjct: 75 IYDFDFV-----TEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQA 129
Query: 438 TDLSEASQEAVEEK 479
TD SE E + E+
Sbjct: 130 TDPSELDIELLRER 143
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 237
+SG+ V+ CK T+ E+++ K HRYV+F I D+ K++ VE G ++ F++ L +
Sbjct: 11 SSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPE-- 68
Query: 238 TGECR 252
+CR
Sbjct: 69 -SDCR 72
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +3
Query: 291 GTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAV 470
G + + K+F +SW P A V+ KM+Y+SS + KK L GVQ +QATD SE + + +
Sbjct: 86 GEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVL 145
Query: 471 EE 476
++
Sbjct: 146 KD 147
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 64 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 237
SGV VS+ CK ++E++ + HR+VVF I D +Q+ V+ VG R+A +++ L G
Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG 64
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +3
Query: 309 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRA 488
+K K+F +SW P ++++ K +Y+ S + + L GV IQATD + E + +
Sbjct: 93 RKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRANR 152
Query: 489 T 491
T
Sbjct: 153 T 153
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 70 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDL 225
+ V + K+ + E+K+ K HRYV+F I D + +I VE G Y+ F L
Sbjct: 20 IEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASL 72
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 38.3 bits (85), Expect = 0.008
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +3
Query: 309 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRA 488
+K K+F +SW P + ++ K +Y+ + + L GV IQATD + E + +
Sbjct: 109 RKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEIQATDPDDMDLEVLRGRANR 168
Query: 489 T 491
T
Sbjct: 169 T 169
Score = 34.7 bits (76), Expect = 0.100
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 70 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDL 225
+ V + K+ + E+ + K HRYV+F I D + +I VE G Y+ F L
Sbjct: 40 IEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASL 92
>12_01_0696 + 5936869-5937068,5937705-5938179,5938240-5938665
Length = 366
Score = 30.7 bits (66), Expect = 1.6
Identities = 26/67 (38%), Positives = 33/67 (49%)
Frame = -2
Query: 528 VASSCVKLFIGDRWRGASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWR 349
VA + L+ WR +SLRRP LPR R L C S++ + S P+R
Sbjct: 212 VAGRGLGLWTMCEWR-SSLRRP---LPR-RHL-CVSDIGIDSASISSFSPAHLRLDHPFR 265
Query: 348 CPGTTTS 328
CP TTTS
Sbjct: 266 CPATTTS 272
>11_02_0138 -
8708483-8709033,8709163-8709265,8709312-8709359,
8713887-8714359,8716353-8716508,8716572-8716617,
8716657-8716713
Length = 477
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 555 GVSESGFGFVASSCVKLFIGDRW 487
G+ +SG F A SC + IG RW
Sbjct: 109 GICQSGMSFRAKSCNRKIIGARW 131
>07_03_0826 -
21774445-21774852,21776047-21776083,21776750-21776839,
21777251-21777399
Length = 227
Score = 28.7 bits (61), Expect = 6.6
Identities = 30/108 (27%), Positives = 39/108 (36%), Gaps = 6/108 (5%)
Frame = +2
Query: 389 RRSEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSFTHELATKPNPLSDTPALTT 568
RR +P R ++ P L S+ RR+ P PI ELA P D
Sbjct: 64 RRYHPIPARYQDLIPRRDALSSLGYARRQMMPFVAPPIGDSEAELALPPMRRRD----AN 119
Query: 569 RGHDTTSRLVLLQRKT------NSINMIDFTGGRTSCESARVGTTAPC 694
R H T R + R T ++ GG AR+G A C
Sbjct: 120 RSHGLT-RAARVDRPTGFDGDCQAMQRRGGVGGVDGVGGARLGGVASC 166
>03_05_1112 +
30488678-30488806,30489047-30489228,30489310-30489505,
30490095-30491117
Length = 509
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 97 TYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTG 243
T +++ +D+ + ++ EK D E + E NA YE+ + L+ G G
Sbjct: 140 TKQKVAEDENRNLIDRWML-EKMKDAERLNEANAMYEEMVLKLKSAGVG 187
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,234,173
Number of Sequences: 37544
Number of extensions: 473781
Number of successful extensions: 1563
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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