Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0267.Seq
(955 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 144 7e-35
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 144 9e-35
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 51 1e-06
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 46 3e-05
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 43 3e-04
10_08_0620 - 19321612-19323237 41 0.002
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 40 0.004
09_04_0042 - 14055885-14056142,14057508-14057774,14057859-140592... 37 0.021
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 37 0.027
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 36 0.036
09_02_0318 - 7191763-7191879,7192375-7192494,7192568-7192666,719... 32 0.77
06_01_1053 - 8328902-8329156,8330538-8330804,8330895-8332343,833... 32 0.77
02_02_0163 + 7320615-7321673 31 1.4
02_01_0437 + 3171932-3172189,3174102-3174302,3174708-3174989 30 2.4
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615... 30 3.1
05_03_0582 - 15738503-15739301,15739385-15739642,15740585-157406... 30 3.1
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 29 5.5
04_04_0200 - 23529497-23531938,23532586-23533720,23534272-235344... 29 5.5
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156... 28 9.5
03_02_0002 + 4853886-4854812 28 9.5
02_05_0131 + 26098459-26098668,26098788-26098863,26101972-261021... 28 9.5
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 144 bits (350), Expect = 7e-35
Identities = 61/86 (70%), Positives = 78/86 (90%)
Frame = +1
Query: 256 YNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGD 435
YN+PE+LFADAG++AIEHADFEGIERL LVTGG+I STFD+P+ VKLGHC +IEE++IG+
Sbjct: 290 YNFPEELFADAGILAIEHADFEGIERLALVTGGDIASTFDNPESVKLGHCNVIEEIMIGE 349
Query: 436 ESLIRFSGVALGSACTIVIRGATQQL 513
+ LI FSGVA+G ACTIV+RGA++ +
Sbjct: 350 DKLIHFSGVAMGQACTIVLRGASEHV 375
Score = 126 bits (305), Expect = 2e-29
Identities = 53/84 (63%), Positives = 73/84 (86%)
Frame = +2
Query: 2 SXLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAE 181
S LDEGF+L+KK+G+ QPK++ENA IL+ANT MDTDK+K++G+ ++VDSMAK+AE+E AE
Sbjct: 205 SFLDEGFILDKKIGLGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVAEIEAAE 264
Query: 182 KEKMKDKVNKILAHKCNVFINRQL 253
K+KM++KV KI+ H N F+NRQL
Sbjct: 265 KQKMREKVQKIIGHGINCFVNRQL 288
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/85 (31%), Positives = 38/85 (44%)
Frame = +3
Query: 510 VIDEAERSLHDALCVLAATVKEPKSYVDEGLVKC*WXXXXXXXXXXXXXXXXXXXXXXXX 689
V+DEAERSLHDALCVL+ TV + + G +
Sbjct: 375 VLDEAERSLHDALCVLSQTVNDTRVLFGGGWPEMVMAKAVDDLARKTPGKKSHAIDAFSR 434
Query: 690 XXXXXXSAVADNAXYDHSDLIARLR 764
+ +ADNA D ++LI++LR
Sbjct: 435 ALQAIPTIIADNAGLDSAELISQLR 459
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 144 bits (349), Expect = 9e-35
Identities = 61/86 (70%), Positives = 78/86 (90%)
Frame = +1
Query: 256 YNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGD 435
YN+PE+LFADAG++AIEHADFEGIERL LVTGG+I STFD+P+ VKLGHCK+IEE++IG+
Sbjct: 267 YNFPEELFADAGILAIEHADFEGIERLALVTGGDIASTFDNPESVKLGHCKVIEEIMIGE 326
Query: 436 ESLIRFSGVALGSACTIVIRGATQQL 513
+ LI FSGV +G ACTIV+RGA++ +
Sbjct: 327 DRLIHFSGVEMGQACTIVLRGASEHV 352
Score = 126 bits (305), Expect = 2e-29
Identities = 53/84 (63%), Positives = 73/84 (86%)
Frame = +2
Query: 2 SXLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAE 181
S LDEGF+L+KK+G+ QPK++ENA IL+ANT MDTDK+K++G+ ++VDSMAK+AE+E AE
Sbjct: 182 SFLDEGFILDKKIGLGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVAEIEAAE 241
Query: 182 KEKMKDKVNKILAHKCNVFINRQL 253
K+KM++KV KI+ H N F+NRQL
Sbjct: 242 KQKMREKVQKIIGHGINCFVNRQL 265
Score = 45.2 bits (102), Expect = 8e-05
Identities = 28/85 (32%), Positives = 38/85 (44%)
Frame = +3
Query: 510 VIDEAERSLHDALCVLAATVKEPKSYVDEGLVKC*WXXXXXXXXXXXXXXXXXXXXXXXX 689
V+DEAERSLHDALCVL+ TV + + G +
Sbjct: 352 VLDEAERSLHDALCVLSQTVNDTRVLYGGGWPEMVMAKEVDGLARKTPGKKSHAIEAFSR 411
Query: 690 XXXXXXSAVADNAXYDHSDLIARLR 764
+ +ADNA D +DLI++LR
Sbjct: 412 ALQSIPTIIADNAGLDSADLISQLR 436
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = +1
Query: 271 QLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIR 450
Q FAD + E ++R+ TGG + ++ ++ LG C++ EE +G+E
Sbjct: 304 QYFADRDIFCAGRVAEEDLQRVAAATGGTVQTSVNNVIDEVLGTCEVFEERQVGNERFNI 363
Query: 451 FSGVALGSACTIVIRGATQQ 510
FSG G TIV+RG Q
Sbjct: 364 FSGCPSGQTATIVLRGGADQ 383
Score = 28.7 bits (61), Expect = 7.2
Identities = 21/93 (22%), Positives = 33/93 (35%)
Frame = +3
Query: 513 IDEAERSLHDALCVLAATVKEPKSYVDEGLVKC*WXXXXXXXXXXXXXXXXXXXXXXXXX 692
I+EAERSLHDA+ ++ +K G +
Sbjct: 385 IEEAERSLHDAIMIVRRALKNSTVVPGGGAIDMEISKYLRQHARTIAGKSQFFVNSFAKA 444
Query: 693 XXXXXSAVADNAXYDHSDLIARLRXPSILXXGA 791
+ DNA +D +D++ +LR GA
Sbjct: 445 LEVIPRQLCDNAGFDATDVLNKLRQKHASGEGA 477
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/75 (34%), Positives = 38/75 (50%)
Frame = +1
Query: 274 LFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRF 453
L A AG++ + A +ERL L GGE V + D + LG L+ E +G+E
Sbjct: 323 LLARAGIIGLRRAKRRNMERLVLACGGEAVDSVDDLTEDCLGWAGLVYEHTLGEEKYTFI 382
Query: 454 SGVALGSACTIVIRG 498
V +CTI+I+G
Sbjct: 383 ENVKNPRSCTILIKG 397
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 43.2 bits (97), Expect = 3e-04
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +1
Query: 277 FADAGVMAIEHADFEGIERLGLVTGGEIVSTF------DSPDKVKLGHCKLIEEVLIGDE 438
F +AG +A+ E + + TG +VSTF ++ D LGH + E I D+
Sbjct: 285 FVEAGAIAVRRVRKEDLRHVAKATGATMVSTFADMEGEETFDSSFLGHADEVVEERIADD 344
Query: 439 SLIRFSGVALGSACTIVIRGA 501
+I G SA +I++RGA
Sbjct: 345 DVILVKGTKNTSAVSIILRGA 365
Score = 31.9 bits (69), Expect = 0.77
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 510 VIDEAERSLHDALCVLAATVKEPKSYVDEGLVK 608
++DE +RSLHDALC++ T++ G V+
Sbjct: 369 MLDEIDRSLHDALCIVKRTLESNMVVAGGGAVE 401
>10_08_0620 - 19321612-19323237
Length = 541
Score = 40.7 bits (91), Expect = 0.002
Identities = 20/82 (24%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Frame = +1
Query: 280 ADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGD---ESLIR 450
A A +M ++ + + IE + +++ + + KLGH L+EE+ +GD +++
Sbjct: 318 AKAKIMVVKDVERDEIEFITKTLNCMPIASIEHLREDKLGHAHLVEEISVGDGNNNKIVK 377
Query: 451 FSGVA-LGSACTIVIRGATQQL 513
+G+ +G T+++RG+ Q +
Sbjct: 378 ITGIKNMGRTATVLVRGSNQMV 399
Score = 33.9 bits (74), Expect = 0.19
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 510 VIDEAERSLHDALCVLAATVKE 575
VIDEA+RSLHDA CV+ V +
Sbjct: 399 VIDEAQRSLHDAFCVIRCLVNK 420
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 39.5 bits (88), Expect = 0.004
Identities = 18/77 (23%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 280 ADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSG 459
A A ++ ++ + + IE + ++ + + KLG+ L+EEV +G+ +++ G
Sbjct: 314 AKAKILVVKDVERDEIEFITKTLNCLPIANIEHFREDKLGYADLVEEVSVGESKIVKIMG 373
Query: 460 VA-LGSACTIVIRGATQ 507
+ +G T+++RG+ Q
Sbjct: 374 IKDMGRTATVLVRGSNQ 390
Score = 35.5 bits (78), Expect = 0.063
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 510 VIDEAERSLHDALCVL 557
VIDEAERSLHDALCV+
Sbjct: 392 VIDEAERSLHDALCVI 407
>09_04_0042 -
14055885-14056142,14057508-14057774,14057859-14059292,
14059378-14059539,14059642-14059768,14059869-14060200,
14060289-14061083,14061379-14061714,14061791-14062730,
14063338-14063588
Length = 1633
Score = 37.1 bits (82), Expect = 0.021
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Frame = +1
Query: 325 IERLGLVTGGEIVSTFDSPDKVKLGHCKL--IEEVLIGD---------ESLIRFSGVALG 471
++R+ TGG+I S+ D+ +LGHC +E+VL ++L+ F G
Sbjct: 446 LDRISRCTGGQIASSIDNIASARLGHCDTFKVEKVLESSTEHSEKKSTKTLMFFEGCMKR 505
Query: 472 SACTIVIRGA 501
CT+++RGA
Sbjct: 506 LGCTVLLRGA 515
>08_02_0864 +
21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 36.7 bits (81), Expect = 0.027
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
Frame = +1
Query: 262 YPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHC------KLIEEV 423
Y + LF + + + + +ER+ TG IV + D KLGHC K +EE
Sbjct: 549 YAQDLFLEKNISLVLNIKRPLLERISRCTGAHIVPSIDYVSSQKLGHCDLFHVEKYVEEH 608
Query: 424 LIGDE-------SLIRFSGVALGSACTIVIRGA 501
E +L+ F G CTI+++GA
Sbjct: 609 GTAGEGGKKMLKTLMFFEGCPKPLGCTILLKGA 641
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 36.3 bits (80), Expect = 0.036
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +1
Query: 325 IERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIG--DESLIRFSGVALGSACTIVIRG 498
+E + + TGG IV F KLG ++ E G + ++ A A TI IRG
Sbjct: 326 LELIAIATGGRIVPRFQELSPEKLGKAGIVREKSFGTTKDRMLYIEQCANSRAVTIFIRG 385
Query: 499 ATQQL--STKLSVHSMM 543
+ + TK S+H +
Sbjct: 386 GNKMMIEETKRSLHDAL 402
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 510 VIDEAERSLHDALCV 554
+I+E +RSLHDALCV
Sbjct: 390 MIEETKRSLHDALCV 404
>09_02_0318 -
7191763-7191879,7192375-7192494,7192568-7192666,
7192846-7192957,7193058-7193161,7193341-7193520,
7193611-7193880,7194364-7194660,7195283-7195477
Length = 497
Score = 31.9 bits (69), Expect = 0.77
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 50 QPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEK 190
Q + NA+I +A PMD ++ FG +K+D +I +E AEK K
Sbjct: 203 QAHRETNADITVAALPMDEERATAFG-LMKIDDEGRI--IEFAEKPK 246
>06_01_1053 -
8328902-8329156,8330538-8330804,8330895-8332343,
8332461-8332619,8333246-8333372,8333444-8333775,
8333859-8334593,8334735-8335073,8335160-8335313,
8335405-8336154,8336242-8336372
Length = 1565
Score = 31.9 bits (69), Expect = 0.77
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Frame = +1
Query: 262 YPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKL--IEEVLIGD 435
Y +QL A + + + +ER+ TG +I S+ ++ V+LG C+ IE V
Sbjct: 374 YAQQLLAK-DISLVLNVKRSLLERISRCTGAQIASSIENVTSVRLGQCQTFWIERVSESS 432
Query: 436 ----------ESLIRFSGVALGSACTIVIRGATQQ 510
++L+ F G CTI++RG + +
Sbjct: 433 SPKNANKKSAKTLMFFDGCPRRLGCTILLRGTSHE 467
>02_02_0163 + 7320615-7321673
Length = 352
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/78 (23%), Positives = 32/78 (41%)
Frame = -3
Query: 524 SFVDNCCVAPRITIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPV 345
+ + +CC + V P A P +L+S +++ L SG + + PP
Sbjct: 16 ALIASCCALVLLATVLLLPRAPPAAPEQLASAAAAAAVRLDARVERRSGNEVLWQLPPPT 75
Query: 344 TKPSLSIPSKSACSIAIT 291
T P ++ C+I T
Sbjct: 76 TPPRAAVFVAPGCTIRAT 93
>02_01_0437 + 3171932-3172189,3174102-3174302,3174708-3174989
Length = 246
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 513 IDEAERSLHDALCVLAATVKEP 578
I+EAERSLH A+ +++ VK P
Sbjct: 107 IEEAERSLHGAIIIVSRAVKNP 128
>08_02_0744 -
20659326-20659580,20659748-20660005,20660103-20661575,
20661677-20661835,20661948-20662074,20662155-20662486,
20662574-20663383,20663772-20664110,20664187-20664340,
20664427-20665143,20665699-20665967
Length = 1630
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Frame = +1
Query: 325 IERLGLVTGGEIVSTFDSPDKVKLGHCKL-----IEEVLIGDE-------SLIRFSGVAL 468
++R+ +G +I S+ D+ +LG C+L + E G + +L+ F G
Sbjct: 429 LDRISRCSGAQIASSIDNIASARLGQCELFKVHKVSEFSSGKQTNRRSMKTLMFFEGCPR 488
Query: 469 GSACTIVIRGATQQLSTKL 525
CT+++RG+ ++ K+
Sbjct: 489 RLGCTVLLRGSCREELKKI 507
>05_03_0582 -
15738503-15739301,15739385-15739642,15740585-15740670,
15740879-15740960,15741044-15741213,15742081-15742194,
15742984-15743082,15743171-15743249,15744604-15744710
Length = 597
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 434 SPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPSKSA 309
S + TS T SG S T+SPPV +L++P A
Sbjct: 346 SGVATSLSTAHDDEITSSGSSGTSTVSPPVQSHALALPDPPA 387
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 29.1 bits (62), Expect = 5.5
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 286 AGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLG-HCKLIEEVLIGDESLIRFSGV 462
AGV AI R+ G IV+ + + +G L E IGDE
Sbjct: 309 AGVSAIRRLRKTDNNRIAKACGAVIVNRPEELQESDVGTRAGLFEVKKIGDEFFTFIVDC 368
Query: 463 ALGSACTIVIRGATQQL 513
ACT+++RGA++ +
Sbjct: 369 KDPKACTVLLRGASKDV 385
>04_04_0200 - 23529497-23531938,23532586-23533720,23534272-23534463,
23535527-23535570
Length = 1270
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 455 EKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPSKSAC 306
+ R S P S+++L +SG SN +T S P+ + +P KS C
Sbjct: 900 DSRTNRSEP-GPSTVSLPTVEERVSGSSNQETKSTPLAREGEQLPEKSCC 948
>03_03_0266 -
16014740-16015045,16015566-16015601,16015623-16015643,
16016331-16016591,16017504-16018985,16019834-16019989,
16020154-16020277,16020399-16020615,16020877-16021774,
16022947-16023291,16023371-16023565,16023751-16024453,
16024866-16025467
Length = 1781
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +1
Query: 262 YPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKL 411
Y + L + + + + ++R+ T IV + D KLGHC+L
Sbjct: 529 YAQDLLLEKNISLVLNIKRPLLDRIARCTNAHIVPSIDLLPSQKLGHCEL 578
>03_02_0002 + 4853886-4854812
Length = 308
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 459 CSVGLGLHDRNPWCHATVIDEAERSLHDALCVLAATVKEPKSYVDE 596
CSV P CH T + + + D +C A V E + Y+DE
Sbjct: 2 CSVAGNEQCYCPECHRTTVVVVDHATGDTICTECALVLEER-YIDE 46
>02_05_0131 +
26098459-26098668,26098788-26098863,26101972-26102178,
26102311-26102435,26102740-26102900,26102977-26103067,
26103161-26103310,26103396-26103632
Length = 418
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 41 GVHQPKKVENANILIANTPMDTDKI--KVFGSTIKVDSMAKIAELEVAEKEKMK 196
G PKK+ L+ N P D+D + +VFG + + ++ KI + K K K
Sbjct: 253 GYMDPKKLNIEPTLLLNPPADSDVMTEEVFGPILPIITVKKIEDCIAYLKSKPK 306
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,585,330
Number of Sequences: 37544
Number of extensions: 388993
Number of successful extensions: 980
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2752963900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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