Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0267.Seq
(955 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 142 3e-34
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 142 3e-34
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 142 3e-34
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 46 4e-05
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 46 4e-05
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 45 7e-05
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 45 7e-05
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 38 0.008
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 38 0.008
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 38 0.014
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 36 0.056
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 36 0.056
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 34 0.13
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 34 0.13
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 29 3.7
U29488-1|AAA68773.2| 338|Caenorhabditis elegans Serpentine rece... 29 4.9
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 142 bits (345), Expect = 3e-34
Identities = 68/103 (66%), Positives = 82/103 (79%)
Frame = +1
Query: 256 YNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGD 435
YNYPEQLFADA VMAIEHADFEGIERL LV GGEIVSTFDSP + G C LIEE++IG+
Sbjct: 291 YNYPEQLFADAKVMAIEHADFEGIERLALVLGGEIVSTFDSPQTAQFGSCDLIEEIMIGE 350
Query: 436 ESLIRFSGVALGSACTIVIRGATQQLSTKLSVHSMMRFACLLL 564
+ L+RFSGV LG AC++V+RGATQQ+ + S S+ C+L+
Sbjct: 351 DRLLRFSGVKLGEACSVVLRGATQQILDE-SERSLHDALCVLV 392
Score = 132 bits (320), Expect = 3e-31
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +2
Query: 2 SXLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAE 181
S LDEGFLL K G+ QP++VE A ILIANTPMDTDK+KVFGS ++VD +AK+AELE AE
Sbjct: 206 SYLDEGFLLEKLPGMFQPRRVEKAKILIANTPMDTDKVKVFGSRVRVDGVAKVAELEAAE 265
Query: 182 KEKMKDKVNKILAHKCNVFINRQL 253
K KMK+KV+KILAH CNVFINRQL
Sbjct: 266 KLKMKEKVDKILAHNCNVFINRQL 289
Score = 45.2 bits (102), Expect = 7e-05
Identities = 26/85 (30%), Positives = 36/85 (42%)
Frame = +3
Query: 510 VIDEAERSLHDALCVLAATVKEPKSYVDEGLVKC*WXXXXXXXXXXXXXXXXXXXXXXXX 689
++DE+ERSLHDALCVL VKE K+ G +
Sbjct: 376 ILDESERSLHDALCVLVTHVKESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFGR 435
Query: 690 XXXXXXSAVADNAXYDHSDLIARLR 764
+ + DNA D ++L+ RLR
Sbjct: 436 ALAQLPTIICDNAGLDSAELVTRLR 460
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 142 bits (345), Expect = 3e-34
Identities = 68/103 (66%), Positives = 82/103 (79%)
Frame = +1
Query: 256 YNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGD 435
YNYPEQLFADA VMAIEHADFEGIERL LV GGEIVSTFDSP + G C LIEE++IG+
Sbjct: 291 YNYPEQLFADAKVMAIEHADFEGIERLALVLGGEIVSTFDSPQTAQFGSCDLIEEIMIGE 350
Query: 436 ESLIRFSGVALGSACTIVIRGATQQLSTKLSVHSMMRFACLLL 564
+ L+RFSGV LG AC++V+RGATQQ+ + S S+ C+L+
Sbjct: 351 DRLLRFSGVKLGEACSVVLRGATQQILDE-SERSLHDALCVLV 392
Score = 132 bits (320), Expect = 3e-31
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +2
Query: 2 SXLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAE 181
S LDEGFLL K G+ QP++VE A ILIANTPMDTDK+KVFGS ++VD +AK+AELE AE
Sbjct: 206 SYLDEGFLLEKLPGMFQPRRVEKAKILIANTPMDTDKVKVFGSRVRVDGVAKVAELEAAE 265
Query: 182 KEKMKDKVNKILAHKCNVFINRQL 253
K KMK+KV+KILAH CNVFINRQL
Sbjct: 266 KLKMKEKVDKILAHNCNVFINRQL 289
Score = 45.2 bits (102), Expect = 7e-05
Identities = 26/85 (30%), Positives = 36/85 (42%)
Frame = +3
Query: 510 VIDEAERSLHDALCVLAATVKEPKSYVDEGLVKC*WXXXXXXXXXXXXXXXXXXXXXXXX 689
++DE+ERSLHDALCVL VKE K+ G +
Sbjct: 376 ILDESERSLHDALCVLVTHVKESKTVAGAGASEILMSSAIAVEAQKVAGKESLAVEAFGR 435
Query: 690 XXXXXXSAVADNAXYDHSDLIARLR 764
+ + DNA D ++L+ RLR
Sbjct: 436 ALAQLPTIICDNAGLDSAELVTRLR 460
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 142 bits (345), Expect = 3e-34
Identities = 68/103 (66%), Positives = 82/103 (79%)
Frame = +1
Query: 256 YNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGD 435
YNYPEQLFADA VMAIEHADFEGIERL LV GGEIVSTFDSP + G C LIEE++IG+
Sbjct: 291 YNYPEQLFADAKVMAIEHADFEGIERLALVLGGEIVSTFDSPQTAQFGSCDLIEEIMIGE 350
Query: 436 ESLIRFSGVALGSACTIVIRGATQQLSTKLSVHSMMRFACLLL 564
+ L+RFSGV LG AC++V+RGATQQ+ + S S+ C+L+
Sbjct: 351 DRLLRFSGVKLGEACSVVLRGATQQILDE-SERSLHDALCVLV 392
Score = 132 bits (320), Expect = 3e-31
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +2
Query: 2 SXLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAE 181
S LDEGFLL K G+ QP++VE A ILIANTPMDTDK+KVFGS ++VD +AK+AELE AE
Sbjct: 206 SYLDEGFLLEKLPGMFQPRRVEKAKILIANTPMDTDKVKVFGSRVRVDGVAKVAELEAAE 265
Query: 182 KEKMKDKVNKILAHKCNVFINRQL 253
K KMK+KV+KILAH CNVFINRQL
Sbjct: 266 KLKMKEKVDKILAHNCNVFINRQL 289
Score = 45.2 bits (102), Expect = 7e-05
Identities = 26/85 (30%), Positives = 36/85 (42%)
Frame = +3
Query: 510 VIDEAERSLHDALCVLAATVKEPKSYVDEGLVKC*WXXXXXXXXXXXXXXXXXXXXXXXX 689
++DE+ERSLHDALCVL VKE K+ G +
Sbjct: 376 ILDESERSLHDALCVLVTHVKESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFGR 435
Query: 690 XXXXXXSAVADNAXYDHSDLIARLR 764
+ + DNA D ++L+ RLR
Sbjct: 436 ALAQLPTIICDNAGLDSAELVTRLR 460
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 46.0 bits (104), Expect = 4e-05
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +1
Query: 271 QLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIR 450
Q FAD + + ++RL GG +++T D LG C E +G E
Sbjct: 299 QWFADRDMFCAGRIPQDDLDRLMSACGGSVLTTVSQIDDSVLGKCGKFYEQQVGSERYNF 358
Query: 451 FSGVALGSACTIVIRGATQQL--STKLSVH 534
F + ACT+++RG +Q T+ S+H
Sbjct: 359 FEDCSKAQACTLLLRGGAEQFIAETERSLH 388
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 46.0 bits (104), Expect = 4e-05
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +1
Query: 271 QLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIR 450
Q FAD + + ++RL GG +++T D LG C E +G E
Sbjct: 299 QWFADRDMFCAGRIPQDDLDRLMSACGGSVLTTVSQIDDSVLGKCGKFYEQQVGSERYNF 358
Query: 451 FSGVALGSACTIVIRGATQQL--STKLSVH 534
F + ACT+++RG +Q T+ S+H
Sbjct: 359 FEDCSKAQACTLLLRGGAEQFIAETERSLH 388
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 45.2 bits (102), Expect = 7e-05
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +1
Query: 274 LFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRF 453
L A G++A+ A +ERL L GGE V++ D LG L+ E +G+E
Sbjct: 308 LLASEGILALRRAKRRNMERLQLAVGGEAVNSVDDLTPEDLGWAGLVYEHSLGEEKYTFI 367
Query: 454 SGVALGSACTIVIRGATQQLSTKL--SVHSMMR 546
+ T++I+G + T++ ++H +R
Sbjct: 368 EECRAPKSVTLLIKGPNKHTITQIKDAIHDGLR 400
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 45.2 bits (102), Expect = 7e-05
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +1
Query: 274 LFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRF 453
L A G++A+ A +ERL L GGE V++ D LG L+ E +G+E
Sbjct: 308 LLASEGILALRRAKRRNMERLQLAVGGEAVNSVDDLTPEDLGWAGLVYEHSLGEEKYTFI 367
Query: 454 SGVALGSACTIVIRGATQQLSTKL--SVHSMMR 546
+ T++I+G + T++ ++H +R
Sbjct: 368 EECRAPKSVTLLIKGPNKHTITQIKDAIHDGLR 400
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 38.3 bits (85), Expect = 0.008
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Frame = +1
Query: 277 FADAGVMAIEHADFEGIERLGLVTGGEI---VSTFDSP---DKVKLGHCKLIEEVLIGDE 438
F ++G MA+ ++R+ TG + ++T + D LGH I + I D+
Sbjct: 303 FVESGAMAVRRCKKSDLKRIAKATGATLTVSLATLEGDEAFDASLLGHADEIVQERISDD 362
Query: 439 SLIRFSGVALGSACTIVIRGATQQLSTKL--SVHSMM 543
LI G +A +I++RGA + ++ SVH +
Sbjct: 363 ELILIKGPKSRTASSIILRGANDVMLDEMERSVHDSL 399
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/85 (24%), Positives = 33/85 (38%)
Frame = +3
Query: 510 VIDEAERSLHDALCVLAATVKEPKSYVDEGLVKC*WXXXXXXXXXXXXXXXXXXXXXXXX 689
++DE ERS+HD+LCV+ ++ K G V+
Sbjct: 387 MLDEMERSVHDSLCVVRRVLESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFAS 446
Query: 690 XXXXXXSAVADNAXYDHSDLIARLR 764
+A NA D +DL+ +LR
Sbjct: 447 ALLIIPKVLASNAARDSTDLVTKLR 471
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 38.3 bits (85), Expect = 0.008
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Frame = +1
Query: 277 FADAGVMAIEHADFEGIERLGLVTGGEI---VSTFDSP---DKVKLGHCKLIEEVLIGDE 438
F ++G MA+ ++R+ TG + ++T + D LGH I + I D+
Sbjct: 303 FVESGAMAVRRCKKSDLKRIAKATGATLTVSLATLEGDEAFDASLLGHADEIVQERISDD 362
Query: 439 SLIRFSGVALGSACTIVIRGATQQLSTKL--SVHSMM 543
LI G +A +I++RGA + ++ SVH +
Sbjct: 363 ELILIKGPKSRTASSIILRGANDVMLDEMERSVHDSL 399
Score = 31.9 bits (69), Expect = 0.70
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 510 VIDEAERSLHDALCVLAATVKEPKSYVDEGLVK 608
++DE ERS+HD+LCV+ ++ K G V+
Sbjct: 387 MLDEMERSVHDSLCVVRRVLESKKLVAGGGAVE 419
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 37.5 bits (83), Expect = 0.014
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 292 VMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVA-L 468
+MA+ + RL G + + +P LGHC + IGDE+++ F +
Sbjct: 343 IMAVRLTSKFDLRRLCRTVGAQPQARICAPAVNLLGHCDSVAVQEIGDENVVVFDKKSET 402
Query: 469 GSACTIVIRGATQ 507
G TI+IRG++Q
Sbjct: 403 GKVATIIIRGSSQ 415
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 35.5 bits (78), Expect = 0.056
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 292 VMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLI-GDESLIRFSGVA- 465
+M I+ + E IE + G V++ D + LG+ L+EE+ GD +I+ +GV
Sbjct: 322 IMCIKDIEREDIEFYSRILGCRPVASVDHFNADALGYADLVEEIPTGGDGKVIKVTGVQN 381
Query: 466 LGSACTIVIRGATQ 507
G A +I++RG+ +
Sbjct: 382 PGHAVSILLRGSNK 395
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3
Query: 510 VIDEAERSLHDALCVLAATVKE 575
V++EA+RS+HDALCV+ VK+
Sbjct: 397 VLEEADRSIHDALCVIRCLVKK 418
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 35.5 bits (78), Expect = 0.056
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 292 VMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLI-GDESLIRFSGVA- 465
+M I+ + E IE + G V++ D + LG+ L+EE+ GD +I+ +GV
Sbjct: 322 IMCIKDIEREDIEFYSRILGCRPVASVDHFNADALGYADLVEEIPTGGDGKVIKVTGVQN 381
Query: 466 LGSACTIVIRGATQ 507
G A +I++RG+ +
Sbjct: 382 PGHAVSILLRGSNK 395
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3
Query: 510 VIDEAERSLHDALCVLAATVKE 575
V++EA+RS+HDALCV+ VK+
Sbjct: 397 VLEEADRSIHDALCVIRCLVKK 418
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 510 VIDEAERSLHDALCVLAATVKEPK 581
+IDEA+R+LHDALCV+ V++ +
Sbjct: 393 IIDEAKRALHDALCVIRNLVRDSR 416
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 510 VIDEAERSLHDALCVLAATVKEPK 581
+IDEA+R+LHDALCV+ V++ +
Sbjct: 393 IIDEAKRALHDALCVIRNLVRDSR 416
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 510 VIDEAERSLHDALCVLAATVKEPK 581
+IDEA+R+LHDALCV+ V++ +
Sbjct: 187 IIDEAKRALHDALCVIRNLVRDSR 210
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 510 VIDEAERSLHDALCVLAATVKEPK 581
+IDEA+R+LHDALCV+ V++ +
Sbjct: 393 IIDEAKRALHDALCVIRNLVRDSR 416
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 286 AGVMAIEHADFEGIERLGLVTGGEIV-STFDSPDKVKLGHCKLIEEVLIGDESLIRFSGV 462
AG+ + RL V G +V T D D+ +L E V I DE +
Sbjct: 310 AGITCLRRLKKTDNNRLARVCGARVVHDTSDLRDEDVGTKAQLFEVVKIADE-YYTYVTA 368
Query: 463 ALGSACTIVIRGATQQL 513
+ACT+V+RG ++ +
Sbjct: 369 ETTTACTVVLRGPSKDV 385
>U29488-1|AAA68773.2| 338|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 31 protein.
Length = 338
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -2
Query: 117 LILSVSIGVFAIRMLAFSTFFG*CTPTFLFS 25
+I SV + VFAIR L + F CT T LFS
Sbjct: 32 IISSVFLTVFAIRKLWKNNIFPNCTRTLLFS 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,353,518
Number of Sequences: 27780
Number of extensions: 344562
Number of successful extensions: 886
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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