Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0262.Seq
(932 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 65 7e-11
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 60 2e-09
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 59 5e-09
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 58 8e-09
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 58 1e-08
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 57 2e-08
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 57 2e-08
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 57 2e-08
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 56 4e-08
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 54 1e-07
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 54 1e-07
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 54 2e-07
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 53 2e-07
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 53 2e-07
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 53 3e-07
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 53 3e-07
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 52 4e-07
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 52 5e-07
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 51 1e-06
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 51 1e-06
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 51 1e-06
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 51 1e-06
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 50 2e-06
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 50 3e-06
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 50 3e-06
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 49 4e-06
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 48 7e-06
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 48 1e-05
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 48 1e-05
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 47 2e-05
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 47 2e-05
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 47 2e-05
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 46 3e-05
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 46 4e-05
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 46 5e-05
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 46 5e-05
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 46 5e-05
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 45 6e-05
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 45 8e-05
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 45 8e-05
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 45 8e-05
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 44 1e-04
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 44 1e-04
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 44 1e-04
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 44 1e-04
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 44 1e-04
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 44 1e-04
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 44 1e-04
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 44 2e-04
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 44 2e-04
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 43 3e-04
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 43 3e-04
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 43 3e-04
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 43 3e-04
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 43 3e-04
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 43 3e-04
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 43 3e-04
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 43 3e-04
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 43 3e-04
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 43 3e-04
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 42 4e-04
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 42 4e-04
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 42 6e-04
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 42 6e-04
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 42 6e-04
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 42 6e-04
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 42 6e-04
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 42 6e-04
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 42 6e-04
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 42 6e-04
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 41 0.001
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 41 0.001
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 41 0.001
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 41 0.001
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 41 0.001
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 40 0.002
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 40 0.002
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 40 0.002
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 40 0.002
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 40 0.002
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 40 0.002
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 40 0.002
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 40 0.003
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 39 0.004
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 39 0.004
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 39 0.004
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 39 0.004
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 38 0.007
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 38 0.007
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 38 0.007
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 38 0.010
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 38 0.010
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 38 0.010
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 38 0.010
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 38 0.010
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 38 0.010
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 38 0.010
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 38 0.010
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 38 0.010
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 38 0.010
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 38 0.013
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 38 0.013
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 37 0.017
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 37 0.017
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 37 0.017
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 37 0.017
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 37 0.017
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 37 0.017
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 36 0.029
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 36 0.029
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 36 0.029
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 36 0.029
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 36 0.029
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 36 0.038
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 36 0.051
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 35 0.067
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 35 0.067
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 35 0.089
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 35 0.089
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 35 0.089
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 34 0.12
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 34 0.16
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 34 0.16
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 34 0.16
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 34 0.16
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 34 0.16
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 33 0.20
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 33 0.20
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 33 0.20
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 33 0.27
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 33 0.36
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 33 0.36
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 33 0.36
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 32 0.47
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 32 0.47
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 32 0.47
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 32 0.47
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 32 0.47
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 32 0.47
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 32 0.47
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 32 0.47
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 32 0.47
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 32 0.47
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 32 0.47
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 32 0.47
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 32 0.47
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 32 0.63
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 32 0.63
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 31 0.83
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 31 1.1
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 31 1.1
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 31 1.1
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 31 1.1
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 31 1.4
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 31 1.4
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 31 1.4
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 31 1.4
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 31 1.4
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 30 1.9
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 30 1.9
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 30 2.5
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 30 2.5
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 29 3.3
At3g21120.1 68416.m02669 F-box family protein similar to GP:2019... 29 3.3
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 29 4.4
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 29 4.4
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 29 4.4
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 29 4.4
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 29 4.4
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 29 5.8
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 29 5.8
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 29 5.8
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 29 5.8
At1g17250.1 68414.m02101 leucine-rich repeat family protein cont... 29 5.8
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 28 7.7
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 28 7.7
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 28 7.7
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 28 7.7
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 28 7.7
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 28 7.7
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 28 7.7
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 64.9 bits (151), Expect = 7e-11
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Frame = +2
Query: 266 GHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--RDRLV 433
GH ++ V F D ++IVSAS D+T+K+W+ + ++TL GH C+ + + ++
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 434 VSGSSDNTIRLXDIECXSCIXVL 502
VSGS D T+R+ D+ C+ VL
Sbjct: 129 VSGSFDETVRIWDVTTGKCLKVL 151
Score = 58.8 bits (136), Expect = 5e-09
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Frame = +3
Query: 3 VRELQGHTGSV--LCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF-- 170
V+E GH + + D R I+S S D T+++WDV TG+++ TLI H + F
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123
Query: 171 CNGMMVTCSKDRSIXVWDMTS 233
+ M+V+ S D ++ +WD+T+
Sbjct: 124 QSNMIVSGSFDETVRIWDVTT 144
Score = 55.2 bits (127), Expect = 6e-08
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF-- 170
++ L GHT C+ ++ ++ I+SGS D TVR+WDV+TG L L H + V + F
Sbjct: 106 IKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR 165
Query: 171 CNGMMVTCSKDRSIXVWD 224
++V+ S D +WD
Sbjct: 166 DGSLIVSSSYDGLCRIWD 183
Score = 50.8 bits (116), Expect = 1e-06
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Frame = +2
Query: 260 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVW-----NTSSCEFVRTLNGHKXGIACLQY 418
L H AV+ V F D + + SAS D+TI+ + N E V+ GH+ GI+ + +
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 419 RD--RLVVSGSSDNTIRLXDIECXSCIXVLEG 508
R +VS S D T++L D+E S I L G
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIG 111
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = +2
Query: 305 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQ-----YRDRLVVSGSSDNTIRLX 469
K+I+ + D T+++WN SS +F++T GH C+ + +VSGS DN + +
Sbjct: 211 KFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Query: 470 DIECXSCIXVLEG 508
++ + LEG
Sbjct: 271 ELNSKKLLQKLEG 283
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY-RD-R 427
L+GH V+F+ + IVS S D T+++W+ ++ + ++ L H + + + RD
Sbjct: 109 LIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGS 168
Query: 428 LVVSGSSDNTIRLXDIECXSCIXVL 502
L+VS S D R+ D C+ L
Sbjct: 169 LIVSSSYDGLCRIWDSGTGHCVKTL 193
Score = 37.5 bits (83), Expect = 0.013
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 305 KYIVSASGDRTIKVWNTSSCEFVRTLNGHK---XGIACLQYRDRLVVSGSSDNTIRL 466
K IVS S D + +W +S + ++ L GH +AC + L+ SGS D T+R+
Sbjct: 256 KRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVAC-HPTENLIASGSLDKTVRI 311
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Frame = +3
Query: 18 GHTGSVLCLQY-----DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF--CN 176
GH + C+ + + I+SGS D+ V +W++++ +L L H E V+++
Sbjct: 238 GHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTE 297
Query: 177 GMMVTCSKDRSIXVW 221
++ + S D+++ +W
Sbjct: 298 NLIASGSLDKTVRIW 312
Score = 36.3 bits (80), Expect = 0.029
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLI-HHCEAVLHLRFC 173
++ L H+ V + + D I+S S D R+WD TG + TLI V +RF
Sbjct: 148 LKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFS 207
Query: 174 -NGMMVTC-SKDRSIXVWDMTS 233
NG + + D ++ +W+++S
Sbjct: 208 PNGKFILVGTLDNTLRLWNISS 229
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +3
Query: 63 IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHL----RFCNG-MMVTCSKDRSIXVWDM 227
I+ G+ D+T+R+W++S+ L T H A + NG +V+ S+D + +W++
Sbjct: 213 ILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWEL 272
Query: 228 TS 233
S
Sbjct: 273 NS 274
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--RDR 427
L+GH + V F +Y IVSAS D+TI++WN S V L GH + C + ++
Sbjct: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKED 148
Query: 428 LVVSGSSDNTIRLXDI 475
LVVS S D T+R+ DI
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 46.4 bits (105), Expect = 3e-05
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +2
Query: 269 HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRL--VV 436
H V V F + VS D IKVWN + + TL GH I +Q+ +V
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
Query: 437 SGSSDNTIRLXDIECXSCIXVLEG 508
S S D TIR+ + + +C+ VL G
Sbjct: 110 SASDDQTIRIWNWQSRTCVSVLTG 133
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEKY--IVSASGDRTIKVW--NTSSCEFVRTLNGHKXGIACLQY-- 418
VL GH VN F IVS + DR +K+W N + V TL GH ++ + +
Sbjct: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 419 RDRLVVSGSSDNTIRLXD 472
+ ++VS S D +IR+ D
Sbjct: 259 KQDIIVSNSEDKSIRVWD 276
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF--CNG 179
L GH + +Q+ I+S S D T+R+W+ + ++ L H V+ F
Sbjct: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKED 148
Query: 180 MMVTCSKDRSIXVWDM 227
++V+ S D+++ VWD+
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +3
Query: 21 HTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN--GMMV 188
H G V + + + +SG D ++VW+ L TL+ H + + ++F + +V
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
Query: 189 TCSKDRSIXVWDMTSTT 239
+ S D++I +W+ S T
Sbjct: 110 SASDDQTIRIWNWQSRT 126
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYD--ERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN 176
V L GH V+C + E ++S S D TVRVWD+ GA+ + + ++ L N
Sbjct: 128 VSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDIMRLTQMN 185
Score = 35.5 bits (78), Expect = 0.051
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +3
Query: 63 IISGSSDSTVRVWDVS-TGAM-LNTLIHHCEAVLHLRFC--NGMMVTCSKDRSIXVWDMT 230
I+SG+ D V++W ++ T A ++TL H V + F ++V+ S+D+SI VWD T
Sbjct: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDAT 278
Query: 231 STT 239
T
Sbjct: 279 KRT 281
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAMLNT 131
V L+GH +V + + + I+S S D ++RVWD + L T
Sbjct: 241 VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQT 285
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 58.8 bits (136), Expect = 5e-09
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--- 418
+ GH V V F+ K SAS DRTIK+WN S + TL+ H+ G+ C+ Y
Sbjct: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 419 RDR-LVVSGSSDNTIRLXDIECXSCIXVLEG 508
D+ +++GS D+T ++ D + SC+ LEG
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Frame = +2
Query: 260 LVGHRAAVNVVDF----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR 427
L H+ VN VD+ D+ Y+++ S D T KVW+ + V+TL GH ++ + +
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
Query: 428 L--VVSGSSDNTIRL 466
L +++GS D T+R+
Sbjct: 241 LPIIITGSEDGTVRI 255
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +3
Query: 3 VRELQGHTGSV--LCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAV 155
V+ L+GHT +V +C + II+GS D TVR+W +T + NTL + E V
Sbjct: 222 VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
Score = 36.7 bits (81), Expect = 0.022
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +2
Query: 302 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRL--VVSGSSDNTIRLXDI 475
++++V+ + D I+V+N ++ + V+ H I C+ L V+S S D I+L D
Sbjct: 69 KQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 476 E-CXSCIXVLEG 508
E +C + EG
Sbjct: 129 EKGWACTQIFEG 140
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--RDR 427
L GH V+ V F + I++ S D T+++W+ ++ TLN + + Y R
Sbjct: 225 LEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSR 284
Query: 428 LVVSGSSDNTI 460
VV G + TI
Sbjct: 285 RVVIGYDEGTI 295
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 58.0 bits (134), Expect = 8e-09
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--RDR 427
L+GH + V F + +IVSAS D+TI++WN S + L GH + C + ++
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
Query: 428 LVVSGSSDNTIRLXDI 475
LVVS S D T+R+ DI
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +2
Query: 269 HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR--LVV 436
H V V F + VS D IKVWN + + TL GH I +Q+ +V
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIV 109
Query: 437 SGSSDNTIRLXDIECXSCIXVLEG 508
S S D TIR+ + + +CI VL G
Sbjct: 110 SASDDQTIRIWNWQSRTCISVLTG 133
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEKY--IVSASGDRTIKVW--NTSSCEFVRTLNGHKXGIACLQY-- 418
VL GH VN F IVS + DR +K+W N + V TL GH ++ + +
Sbjct: 199 VLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 419 RDRLVVSGSSDNTIRLXD 472
+ ++VS S D +IR+ D
Sbjct: 259 KQDIIVSNSEDKSIRVWD 276
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +3
Query: 21 HTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC--NGMMV 188
H G V + + + +SG D ++VW+ T L TL+ H + + ++F N +V
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIV 109
Query: 189 TCSKDRSIXVWDMTSTT 239
+ S D++I +W+ S T
Sbjct: 110 SASDDQTIRIWNWQSRT 126
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF--CNG 179
L GH + +Q+ I+S S D T+R+W+ + ++ L H V+ F
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
Query: 180 MMVTCSKDRSIXVWDM 227
++V+ S D+++ VWD+
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 36.7 bits (81), Expect = 0.022
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERA--IISGSSDSTVRVWDVS-TGAM-LNTLIHHCEAVLHLRFC-- 173
L+GH V + I+SG+ D V++W ++ T A ++TL H V + F
Sbjct: 200 LEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAK 259
Query: 174 NGMMVTCSKDRSIXVWDMTSTTEI 245
++V+ S+D+SI VWD T T I
Sbjct: 260 QDIIVSNSEDKSIRVWDATKRTGI 283
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAMLNT 131
V L+GH +V + + + I+S S D ++RVWD + + T
Sbjct: 241 VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQT 285
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 57.6 bits (133), Expect = 1e-08
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--- 418
+ GH V V F+ K SAS DRTIK+WN S + TL+ H G+ C+ Y
Sbjct: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTG 196
Query: 419 RDR-LVVSGSSDNTIRLXDIECXSCIXVLEG 508
D+ +++GS D+T ++ D + SC+ LEG
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Frame = +2
Query: 260 LVGHRAAVNVVDF----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR 427
L H VN VD+ D+ Y+++ S D T KVW+ + V+TL GH ++ + +
Sbjct: 181 LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPE 240
Query: 428 L--VVSGSSDNTIRL 466
L +++GS D T+R+
Sbjct: 241 LPIIITGSEDGTVRI 255
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAMLNTLIHHCEAV 155
V+ L+GHT +V + + II+GS D TVR+W +T + NTL + E V
Sbjct: 222 VQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
Score = 34.7 bits (76), Expect = 0.089
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +2
Query: 302 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRL--VVSGSSDNTIRLXDI 475
++++V+ + D I+V+N ++ + ++ H I C+ L V+S S D I+L D
Sbjct: 69 KQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 476 E-CXSCIXVLEG 508
E C + EG
Sbjct: 129 EKGWLCTQIFEG 140
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVRTLN 385
L GH V+ V F + I++ S D T+++W+ ++ TLN
Sbjct: 225 LEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTLN 268
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--- 418
+ GH V V F+ K SAS DRTIK+WN S + TL+ H+ G+ C+ Y
Sbjct: 137 IFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 419 RDR-LVVSGSSDNTIRLXDIECXSCIXVLEG 508
D+ +++GS D+T ++ D + SC+ L+G
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLDG 227
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Frame = +2
Query: 260 LVGHRAAVNVVDF----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR 427
L H+ VN VD+ D+ Y+++ S D T KVW+ + V+TL+GH ++ + +
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE 240
Query: 428 L--VVSGSSDNTIRL 466
L +++GS D T+R+
Sbjct: 241 LPIIITGSEDGTVRI 255
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 3 VRELQGHTGSV--LCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAV 155
V+ L GHT +V +C + II+GS D TVR+W +T + NTL + E V
Sbjct: 222 VQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
Score = 36.7 bits (81), Expect = 0.022
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +2
Query: 302 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRL--VVSGSSDNTIRLXDI 475
++++V+ + D I+V+N ++ + V+ H I C+ L V+S S D I+L D
Sbjct: 69 KQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 476 E-CXSCIXVLEG 508
E +C + EG
Sbjct: 129 ENGWACTQIFEG 140
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--RDR 427
L GH V+ V F + I++ S D T+++W+ ++ TLN + + Y R
Sbjct: 225 LDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSR 284
Query: 428 LVVSGSSDNTI 460
VV G + TI
Sbjct: 285 RVVIGYDEGTI 295
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--- 418
+ GH V V F+ K SAS DRTIK+WN S + TL+ H+ G+ C+ Y
Sbjct: 137 IFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 419 RDR-LVVSGSSDNTIRLXDIECXSCIXVLEG 508
D+ +++GS D+T ++ D + SC+ L+G
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLDG 227
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Frame = +2
Query: 260 LVGHRAAVNVVDF----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR 427
L H+ VN VD+ D+ Y+++ S D T KVW+ + V+TL+GH ++ + +
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE 240
Query: 428 L--VVSGSSDNTIRL 466
L +++GS D T+R+
Sbjct: 241 LPIIITGSEDGTVRI 255
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 3 VRELQGHTGSV--LCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAV 155
V+ L GHT +V +C + II+GS D TVR+W +T + NTL + E V
Sbjct: 222 VQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
Score = 36.7 bits (81), Expect = 0.022
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +2
Query: 302 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRL--VVSGSSDNTIRLXDI 475
++++V+ + D I+V+N ++ + V+ H I C+ L V+S S D I+L D
Sbjct: 69 KQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 476 E-CXSCIXVLEG 508
E +C + EG
Sbjct: 129 ENGWACTQIFEG 140
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--RDR 427
L GH V+ V F + I++ S D T+++W+ ++ TLN + + Y R
Sbjct: 225 LDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSR 284
Query: 428 LVVSGSSDNTI 460
VV G + TI
Sbjct: 285 RVVIGYDEGTI 295
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--- 418
+ GH V V F+ K SAS DRTIK+WN S + TL+ H+ G+ C+ Y
Sbjct: 137 IFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 419 RDR-LVVSGSSDNTIRLXDIECXSCIXVLEG 508
D+ +++GS D+T ++ D + SC+ L+G
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLDG 227
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Frame = +2
Query: 260 LVGHRAAVNVVDF----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR 427
L H+ VN VD+ D+ Y+++ S D T KVW+ + V+TL+GH ++ + +
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE 240
Query: 428 L--VVSGSSDNTIRL 466
L +++GS D T+R+
Sbjct: 241 LPIIITGSEDGTVRI 255
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 3 VRELQGHTGSV--LCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAV 155
V+ L GHT +V +C + II+GS D TVR+W +T + NTL + E V
Sbjct: 222 VQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
Score = 36.7 bits (81), Expect = 0.022
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +2
Query: 302 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRL--VVSGSSDNTIRLXDI 475
++++V+ + D I+V+N ++ + V+ H I C+ L V+S S D I+L D
Sbjct: 69 KQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 476 E-CXSCIXVLEG 508
E +C + EG
Sbjct: 129 ENGWACTQIFEG 140
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--RDR 427
L GH V+ V F + I++ S D T+++W+ ++ TLN + + Y R
Sbjct: 225 LDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSR 284
Query: 428 LVVSGSSDNTI 460
VV G + TI
Sbjct: 285 RVVIGYDEGTI 295
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Frame = +2
Query: 266 GHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS-CEFVRTLNGHKXGIACLQYR--DRL 430
GH + ++ + + D Y SAS D T+++W+ S E ++ L GH + C+ + L
Sbjct: 83 GHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNL 142
Query: 431 VVSGSSDNTIRLXDIECXSCIXVLEGGPVP 520
+VSGS D TIR+ +++ C+ +++ +P
Sbjct: 143 IVSGSFDETIRIWEVKTGKCVRMIKAHSMP 172
Score = 54.8 bits (126), Expect = 8e-08
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYD--ERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAV--LHLRF 170
++ L+GHT V C+ ++ I+SGS D T+R+W+V TG + + H + +H
Sbjct: 121 LKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNR 180
Query: 171 CNGMMVTCSKDRSIXVWDMTSTT 239
++V+ S D S +WD T
Sbjct: 181 DGSLIVSASHDGSCKIWDAKEGT 203
Score = 48.8 bits (111), Expect = 5e-06
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DR 427
L GH AA++ V F D + SAS D+T+ +W+ ++ + GH GI+ L +
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSH 98
Query: 428 LVVSGSSDNTIRLXDIEC-XSCIXVLEG 508
S S D T+R+ D C+ VL G
Sbjct: 99 YTCSASDDCTLRIWDARSPYECLKVLRG 126
Score = 48.4 bits (110), Expect = 7e-06
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY-RD- 424
VL GH V V+F+ IVS S D TI++W + + VR + H I+ + + RD
Sbjct: 123 VLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDG 182
Query: 425 RLVVSGSSDNTIRLXDIECXSCIXVL--EGGPVPNFA 529
L+VS S D + ++ D + +C+ L + P +FA
Sbjct: 183 SLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFA 219
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN 176
++ L+GHT ++ C+++ D + S S D T+ +W + ++++ H + L + +
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 177 GMMVTC--SKDRSIXVWDMTSTTEIM 248
TC S D ++ +WD S E +
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECL 121
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +2
Query: 305 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQ-----YRDRLVVSGSSDNTIRLX 469
K+I+ A+ D T+K+ N ++ +F++ GH + C+ + +VSGS DN + L
Sbjct: 226 KFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLW 285
Query: 470 DIECXSCIXVLEG 508
D++ + + LEG
Sbjct: 286 DLQARNILQRLEG 298
Score = 36.3 bits (80), Expect = 0.029
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Frame = +3
Query: 18 GHTGSVLCLQY-----DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNGM 182
GHT V C+ + + I+SGS D+ V +WD+ +L L H +AV+ + C+ +
Sbjct: 253 GHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVS-CHPV 311
Query: 183 MVTCSK-----DRSIXVW 221
S D++I +W
Sbjct: 312 QNEISSSGNHLDKTIRIW 329
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +2
Query: 305 KYIVSASGDRTIKVWNTSSCEFVRTLNGHK---XGIACLQYRDRLVVSGSS-DNTIRL 466
KYIVS S D + +W+ + ++ L GH ++C ++ + SG+ D TIR+
Sbjct: 271 KYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRI 328
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLI 137
VR ++ H+ + + + D I+S S D + ++WD G L TLI
Sbjct: 163 VRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLI 209
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 371 VRTLNGHKXGIACLQYRD--RLVVSGSSDNTIRLXDIECXSCIXVLEG 508
++TL GH I+C+++ + L+ S S D T+ L S I EG
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEG 83
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +2
Query: 245 NAXGVLVGHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKXGIACLQY 418
NA L GH + ++ V FD ++ A+G TIK+W+ + VRTL GH+ + +
Sbjct: 50 NAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109
Query: 419 R--DRLVVSGSSDNTIRLXDIECXSCIXVLEG 508
SGS D +++ DI CI +G
Sbjct: 110 HPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF-- 170
+ +GHT V L++ D R ++SG D+ V+VWD++ G +L H + L F
Sbjct: 136 IHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHP 195
Query: 171 CNGMMVTCSKDRSIXVWDM 227
++ T S DR++ WD+
Sbjct: 196 HEFLLATGSADRTVKFWDL 214
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DR 427
L GHR+ VDF ++ S S D +K+W+ + T GH G+ L++ R
Sbjct: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 156
Query: 428 LVVSGSSDNTIRLXDI 475
VVSG DN +++ D+
Sbjct: 157 WVVSGGEDNIVKVWDL 172
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDE--RAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC- 173
VR L GH + + + + SGS D+ +++WD+ ++T H V LRF
Sbjct: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP 153
Query: 174 -NGMMVTCSKDRSIXVWDMTS 233
+V+ +D + VWD+T+
Sbjct: 154 DGRWVVSGGEDNIVKVWDLTA 174
Score = 41.9 bits (94), Expect = 6e-04
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = +2
Query: 263 VGHRAAVNVVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--RDR 427
V H AAVN + K +V+ D + +W + +L GH GI + + +
Sbjct: 13 VAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEV 72
Query: 428 LVVSGSSDNTIRLXDIECXSCIXVLEG 508
LV +G++ TI+L D+E + L G
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTG 99
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 269 HRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY 418
H + +DF E + + S DRT+K W+ + E + + G+ CL +
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSF 235
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +2
Query: 245 NAXGVLVGHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKXGIACLQY 418
NA L GH + ++ V FD ++ A+G TIK+W+ + VRTL GH+ + +
Sbjct: 50 NAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109
Query: 419 R--DRLVVSGSSDNTIRLXDIECXSCIXVLEG 508
SGS D +++ DI CI +G
Sbjct: 110 HPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF-- 170
+ +GHT V L++ D R ++SG D+ V+VWD++ G +L H + L F
Sbjct: 136 IHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHP 195
Query: 171 CNGMMVTCSKDRSIXVWDM 227
++ T S DR++ WD+
Sbjct: 196 HEFLLATGSADRTVKFWDL 214
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DR 427
L GHR+ VDF ++ S S D +K+W+ + T GH G+ L++ R
Sbjct: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 156
Query: 428 LVVSGSSDNTIRLXDI 475
VVSG DN +++ D+
Sbjct: 157 WVVSGGEDNIVKVWDL 172
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDE--RAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC- 173
VR L GH + + + + SGS D+ +++WD+ ++T H V LRF
Sbjct: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP 153
Query: 174 -NGMMVTCSKDRSIXVWDMTS 233
+V+ +D + VWD+T+
Sbjct: 154 DGRWVVSGGEDNIVKVWDLTA 174
Score = 41.9 bits (94), Expect = 6e-04
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = +2
Query: 263 VGHRAAVNVVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--RDR 427
V H AAVN + K +V+ D + +W + +L GH GI + + +
Sbjct: 13 VAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEV 72
Query: 428 LVVSGSSDNTIRLXDIECXSCIXVLEG 508
LV +G++ TI+L D+E + L G
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTG 99
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 269 HRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY 418
H + +DF E + + S DRT+K W+ + E + + G+ CL +
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSF 235
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DR 427
L GH+ VN V F D K+I SAS D+++++WN + +FV GH + + + R
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSR 415
Query: 428 LVVSGSSDNTIRLXDI 475
L++SGS D+T+++ +I
Sbjct: 416 LLLSGSKDSTLKIWEI 431
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC- 173
V +GH G V + + D R ++SGS DST+++W++ T + L H + V + +
Sbjct: 395 VTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSP 454
Query: 174 -NGMMVTCSKDRSIXVW 221
+V+ KDR + +W
Sbjct: 455 DGEKVVSGGKDRVLKLW 471
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = +3
Query: 12 LQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC-NGM 182
+ GH +VLC+ + D + + SGS D+TVR+WD+ T L T H VL + + +G
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGK 164
Query: 183 -MVTCSKDRSIXVWD 224
+V+ SK I W+
Sbjct: 165 HLVSGSKSGEICCWN 179
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 260 LVGHRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVV 436
L GH AV V + + I + S D TIK+W T+ + +R L GH I L V+
Sbjct: 237 LSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEYVL 296
Query: 437 -SGSSDNTIR 463
+G+ D+T R
Sbjct: 297 RTGAFDHTGR 306
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DR 427
+ GH AV V F D K + S SGD T+++W+ + + T GHK + + + +
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGK 164
Query: 428 LVVSGSSDNTI 460
+VSGS I
Sbjct: 165 HLVSGSKSGEI 175
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 314 VSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY-RDRLVVSGSSDNTIRLXDIECXSC 490
V++S D ++W+ + + + L+GH + C+++ D ++ +GS D TI++ +
Sbjct: 215 VTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKL 274
Query: 491 IXVLEG 508
I L+G
Sbjct: 275 IRELKG 280
Score = 34.7 bits (76), Expect = 0.089
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +2
Query: 257 VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--D 424
V GH V V + D + ++S S D T+K+W + + + L GH + + +
Sbjct: 397 VFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDG 456
Query: 425 RLVVSGSSDNTIRL 466
VVSG D ++L
Sbjct: 457 EKVVSGGKDRVLKL 470
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRD--RL 430
V VG N V ++ + ++ + C +T+ GH + C+ + +
Sbjct: 66 VPVGTYLEKNKVSVEKVLTIVYQQQAVFRIRPVNRCS--QTIAGHAEAVLCVSFSPDGKQ 123
Query: 431 VVSGSSDNTIRLXDIECXSCIXVLEG 508
+ SGS D T+RL D+ + + +G
Sbjct: 124 LASGSGDTTVRLWDLYTETPLFTCKG 149
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Frame = +3
Query: 15 QGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNT-LIHHCEAV-------LHL 164
+GH VL + + D + ++SGS + W+ G + + L H + + +HL
Sbjct: 148 KGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHL 207
Query: 165 RFCNGMMVTCSKDRSIXVWDMTSTTEIM 248
VT SKD +WD+T I+
Sbjct: 208 SSPCRRFVTSSKDGDARIWDITLKKSII 235
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +3
Query: 63 IISGSSDSTVRVWDVSTGAM-LNTLIHHCEAVLHLRFC-NGMMV-TCSKDRSIXVWD 224
++SGS D T+ +W+ S L H + V H+ F +G + + S D+S+ +W+
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +2
Query: 245 NAXGVLVGHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY 418
NA L GH + ++ V FD E + + + TIK+W+ + VRTL GH+ + +
Sbjct: 143 NAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNF 202
Query: 419 R--DRLVVSGSSDNTIRLXDIECXSCIXVLEG 508
SGS D +++ DI CI +G
Sbjct: 203 HPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 234
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Frame = +2
Query: 266 GHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--RDRLV 433
GH VNV+ F D ++IVS D +KVW+ ++ + + H+ I L + + L+
Sbjct: 234 GHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLL 293
Query: 434 VSGSSDNTIRLXDIECXSCI 493
+GS+D T++ D+E I
Sbjct: 294 ATGSADKTVKFWDLETFELI 313
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF-- 170
+ +GHT V L++ D R I+SG D+ V+VWD++ G +L+ H + L F
Sbjct: 229 IHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHP 288
Query: 171 CNGMMVTCSKDRSIXVWDM 227
++ T S D+++ WD+
Sbjct: 289 HEFLLATGSADKTVKFWDL 307
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Frame = +2
Query: 260 LVGHRA---AVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--D 424
L GHR+ +VN F E + S S D +K+W+ + T GH G+ L++
Sbjct: 190 LTGHRSNCVSVNFHPFGE-FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG 248
Query: 425 RLVVSGSSDNTIRLXDI 475
R +VSG DN +++ D+
Sbjct: 249 RWIVSGGEDNVVKVWDL 265
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = +2
Query: 263 VGHRAAVNVVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--RDR 427
V H AAVN + K +V+ D + +W + +L GH GI + + +
Sbjct: 106 VAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEG 165
Query: 428 LVVSGSSDNTIRLXDIECXSCIXVLEG 508
LV +G++ TI+L D+E + L G
Sbjct: 166 LVAAGAASGTIKLWDLEEAKVVRTLTG 192
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDE--RAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC- 173
VR L GH + + + + SGS D+ +++WD+ ++T H V LRF
Sbjct: 187 VRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP 246
Query: 174 -NGMMVTCSKDRSIXVWDMTS 233
+V+ +D + VWD+T+
Sbjct: 247 DGRWIVSGGEDNVVKVWDLTA 267
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 269 HRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY 418
H + +DF E + + S D+T+K W+ + E + + G+ CL +
Sbjct: 277 HEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTF 328
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +2
Query: 260 LVGHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DR 427
L GH +AV+ V FD E +++ + IK+W+ + VR GH+ + +++
Sbjct: 54 LCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGE 113
Query: 428 LVVSGSSDNTIRLXDIECXSCIXVLEG 508
+ SGSSD +++ DI CI +G
Sbjct: 114 FLASGSSDANLKIWDIRKKGCIQTYKG 140
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = +2
Query: 266 GHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DRLV 433
GHR+ + V+F +++ S S D +K+W+ ++T GH GI+ +++ R V
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWV 157
Query: 434 VSGSSDNTIRLXDI 475
VSG DN +++ D+
Sbjct: 158 VSGGLDNVVKVWDL 171
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF-- 170
++ +GH+ + +++ D R ++SG D+ V+VWD++ G +L+ H + L F
Sbjct: 135 IQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHP 194
Query: 171 CNGMMVTCSKDRSIXVWDM 227
++ T S DR++ WD+
Sbjct: 195 LEFLLATGSADRTVKFWDL 213
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDE--RAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC- 173
VR GH + +++ + SGSSD+ +++WD+ + T H + +RF
Sbjct: 93 VRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTP 152
Query: 174 -NGMMVTCSKDRSIXVWDMTSTTEIMLXECWWDTGPL 281
+V+ D + VWD+T+ +L E + GP+
Sbjct: 153 DGRWVVSGGLDNVVKVWDLTAGK--LLHEFKFHEGPI 187
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 269 HRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR-DRLVVS 439
H + +DF E + + S DRT+K W+ + E + + G+ +++ D +
Sbjct: 183 HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLF 242
Query: 440 GSSDNTIRLXDIECXSC 490
D+++++ E C
Sbjct: 243 CGLDDSLKVYSWEPVVC 259
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/70 (34%), Positives = 39/70 (55%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNGMMVT 191
L+GH+G V C + + SGS D T+++WD++T + TL H V L + +++
Sbjct: 254 LEGHSGEVTCFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWDKCLIS 313
Query: 192 CSKDRSIXVW 221
S D +I VW
Sbjct: 314 SSLDGTIKVW 323
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVS 439
L GH V + + S S D+TIK+W+ ++ + + TL H + L D+ ++S
Sbjct: 254 LEGHSGEVTCFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWDKCLIS 313
Query: 440 GSSDNTIRL 466
S D TI++
Sbjct: 314 SSLDGTIKV 322
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Frame = +2
Query: 281 VNVVDFDEKYIVSASGDRTIKVWNTSS------CEFVRTLNGHKXGIACLQYRDRLVVSG 442
VN + + + + +I VW ++ +++ +L GH + C +++ SG
Sbjct: 215 VNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSG 274
Query: 443 SSDNTIRLXDIECXSCIXVLE 505
S D TI++ D+ CI L+
Sbjct: 275 SVDKTIKMWDLNTLQCIMTLK 295
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTL 134
+ L+ HTG+V L ++ +IS S D T++VW S +L +
Sbjct: 291 IMTLKQHTGTVTSLLCWDKCLISSSLDGTIKVWAYSENGILKVV 334
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNG-MMV 188
L+GHTG+V + D I+SGS D +V VWD T +L L H V ++ +G ++
Sbjct: 895 LKGHTGTVRAISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGERVL 954
Query: 189 TCSKDRSIXVWDM 227
T + D ++ +WD+
Sbjct: 955 TAAHDGTVKMWDV 967
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQ-YRDRLVV 436
L GH V + D IVS S D ++ VW+ + + + L GH ++C++ V+
Sbjct: 895 LKGHTGTVRAISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGERVL 954
Query: 437 SGSSDNTIRLXDIECXSCI 493
+ + D T+++ D+ C+
Sbjct: 955 TAAHDGTVKMWDVRTDMCV 973
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHC---EAVLHLRFC 173
+ +L+GHT + ++ E +I+GS D T RVW VS G+ L H ++V + F
Sbjct: 1015 MHKLKGHTKWIRSIRMVEDTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFD 1074
Query: 174 NGMMVTCSKDRSIXVWD 224
G ++T S D + W+
Sbjct: 1075 KG-IITGSADGLLRFWE 1090
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 51 DERAIISGSSDSTVRVWDVS-TGAMLN-TLIHHCEAVLHLRFCNGMMVTCSKDRSIXVWD 224
D ISGS+D V++WD S G+ L TL H V + G +V+ S D S+ VWD
Sbjct: 866 DAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDRGKIVSGSDDLSVIVWD 925
Query: 225 MTST 236
+T
Sbjct: 926 KQTT 929
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = +2
Query: 275 AAVNVVDFDEKY-IVSASGDRTI-KVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVSGSS 448
+A+ +++D+ I++A+G T+ +W+ S + + L GH I ++ + +++GS
Sbjct: 981 SAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDTLITGSD 1040
Query: 449 DNTIRLXDIECXSCIXVL--EGGPV 517
D T R+ + SC VL GPV
Sbjct: 1041 DWTARVWSVSRGSCDAVLACHAGPV 1065
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTS--SCEFVRTLNGHKXGIACLQYRDRLVVSGSSDNTIRLXD 472
D + +S S D +K+W+ S E TL GH + + +VSGS D ++ + D
Sbjct: 866 DAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDRGKIVSGSDDLSVIVWD 925
Query: 473 IECXSCIXVLEG 508
+ + L+G
Sbjct: 926 KQTTQLLEELKG 937
Score = 34.7 bits (76), Expect = 0.089
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTS--SCEFVRTLNGHKXGIACLQYR--DR 427
L GH + + E +++ S D T +VW+ S SC+ V L H + ++Y D+
Sbjct: 1018 LKGHTKWIRSIRMVEDTLITGSDDWTARVWSVSRGSCDAV--LACHAGPVQSVEYSPFDK 1075
Query: 428 LVVSGSSDNTIRLXD 472
+++GS+D +R +
Sbjct: 1076 GIITGSADGLLRFWE 1090
Score = 31.9 bits (69), Expect = 0.63
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +2
Query: 260 LVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR--L 430
L GH + V+ V + +++A+ D T+K+W+ + V T+ I L+Y D +
Sbjct: 935 LKGHDSQVSCVKMLSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGI 994
Query: 431 VVSGSSDNTIRLXDIECXSCIXVLEG 508
+ + D + DI + L+G
Sbjct: 995 LAAAGRDTVANIWDIRSGKQMHKLKG 1020
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 52.4 bits (120), Expect = 4e-07
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 8/80 (10%)
Frame = +2
Query: 263 VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNT-SSCEF-VRTLNGHKXGIACLQYRDR- 427
VGH V V F D + IVSAS DRTIK+WNT C++ + +GHK ++C+++
Sbjct: 102 VGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNT 161
Query: 428 ---LVVSGSSDNTIRLXDIE 478
+VS S D T+++ +++
Sbjct: 162 LVPTIVSASWDKTVKVWNLQ 181
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +3
Query: 6 RELQGHTGSV--LCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC-- 173
R + GH+ V + L D + +SGS D +R+WD++TG + H + VL + F
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTD 116
Query: 174 NGMMVTCSKDRSIXVWDMTSTTEIMLXE 257
N +V+ S+DR+I +W+ + + E
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISE 144
Score = 48.4 bits (110), Expect = 7e-06
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Frame = +2
Query: 266 GHRAAVNVVDFDEKY----IVSASGDRTIKVWNTSSCEFVRTLNGHK--XGIACLQYRDR 427
GH+ V+ V F IVSAS D+T+KVWN +C+ TL GH +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGS 206
Query: 428 LVVSGSSDNTIRLXDIECXSCIXVLEGGPV 517
L SG D I L D+ + LE G +
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGSI 236
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +2
Query: 260 LVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DR 427
+ GH V V+ D ++ +S S D +++W+ ++ E R GH + + + +R
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 428 LVVSGSSDNTIRLXDI--ECXSCIXVLEG 508
+VS S D TI+L + EC I +G
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEADG 147
Score = 36.3 bits (80), Expect = 0.029
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERA----IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF 170
+ E GH V C+++ I+S S D TV+VW++ + NTL H + +
Sbjct: 142 ISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAV 201
Query: 171 C--NGMMVTCSKDRSIXVWDMTSTTEIMLXE 257
+ + KD I +WD+ ++ E
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +3
Query: 6 RELQGHTGSVLCLQYD--ERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN- 176
R +QGH G V + +D +GS+D T+++WDV+TG + TL H E V L N
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNR 229
Query: 177 -GMMVTCSKDRSIXVWDM 227
M + D+ + WD+
Sbjct: 230 HTYMFSAGDDKQVKCWDL 247
Score = 44.8 bits (101), Expect = 8e-05
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +2
Query: 260 LVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRL- 430
L GH V V Y+ SA D+ +K W+ + +R+ +GH G+ CL L
Sbjct: 214 LTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLD 273
Query: 431 -VVSGSSDNTIRLXDIECXSCIXVLEG 508
+++G D+ R+ DI I L G
Sbjct: 274 VLLTGGRDSVCRVWDIRTKMQIFALSG 300
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR- 427
V+ GH V V FD ++ + S DRTIK+W+ ++ TL GH + L +R
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRH 230
Query: 428 -LVVSGSSDNTIRLXDIECXSCIXVLEG 508
+ S D ++ D+E I G
Sbjct: 231 TYMFSAGDDKQVKCWDLEQNKVIRSYHG 258
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +3
Query: 12 LQGHTGSVLCL--QYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAV 155
L GH +V + + + +++GS D+T++ WD+ G ++TL HH ++V
Sbjct: 298 LSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSV 347
Score = 31.9 bits (69), Expect = 0.63
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSSCEFVRTLNGHKXGIAC--LQYRDRLVVSGSSDNT 457
+V+ S D TIK W+ + + TL HK + L ++ S S+DNT
Sbjct: 317 VVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNT 367
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +3
Query: 12 LQGHTGSV--LCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN--G 179
L H SV + L E A S S+D+T + + + G + ++ + +++ N G
Sbjct: 340 LTHHKKSVRAMTLHPKENAFASASADNTKK-FSLPKGEFCHNMLSQQKTIINAMAVNEDG 398
Query: 180 MMVTCSKDRSIXVWDMTS 233
+MVT + SI WD S
Sbjct: 399 VMVTGGDNGSIWFWDWKS 416
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 51.2 bits (117), Expect = 1e-06
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNGMMVT 191
L GHT +V+ L + SGS D T++VW + + TL H V+ L + +++
Sbjct: 270 LTGHTLAVVTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWDQFLLS 329
Query: 192 CSKDRSIXVW 221
CS D ++ +W
Sbjct: 330 CSLDNTVKIW 339
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVS 439
L GH AV + + S S D+TIKVW+ + + ++TL H + L D+ ++S
Sbjct: 270 LTGHTLAVVTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWDQFLLS 329
Query: 440 GSSDNTIRL 466
S DNT+++
Sbjct: 330 CSLDNTVKI 338
Score = 31.9 bits (69), Expect = 0.63
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC--- 173
++ L H+ V+ L ++ ++S S D+TV++W G L H E L C
Sbjct: 307 IQTLTDHSSVVMSLICWDQFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEHGVLALCGVH 366
Query: 174 ----NGMMVTCSKDRSIXVWDMTSTTE 242
+++ D ++ ++D+ S TE
Sbjct: 367 DAEAKPVLLCACNDNTLRLYDLPSFTE 393
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +2
Query: 311 IVSASGDRTIKVWN----TSSCEFVRTLNGHKXGIACLQYRDRLVVSGSSDNTIRLXDIE 478
+ + + D +I W T+ E +L GH + L + SGS D TI++ ++
Sbjct: 243 LFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANRLYSGSMDKTIKVWSLD 302
Query: 479 CXSCIXVL 502
CI L
Sbjct: 303 NLQCIQTL 310
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 51.2 bits (117), Expect = 1e-06
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 8/80 (10%)
Frame = +2
Query: 263 VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNT-SSCEF-VRTLNGHKXGIACLQYRDR- 427
VGH V V F D + IVSAS DRTIK+WNT C++ + +GHK ++C+++
Sbjct: 102 VGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNT 161
Query: 428 ---LVVSGSSDNTIRLXDIE 478
+VS S D T+++ +++
Sbjct: 162 LVPTIVSASWDKTVKVWNLQ 181
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +3
Query: 6 RELQGHTGSV--LCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC-- 173
R L GH+ V + L D + +SGS D +R+WD++TG + H + VL + F
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTD 116
Query: 174 NGMMVTCSKDRSIXVWDMTSTTEIMLXE 257
N +V+ S+DR+I +W+ + + E
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISE 144
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Frame = +2
Query: 266 GHRAAVNVVDFDEKY----IVSASGDRTIKVWNTSSCEFVRTLNGHK--XGIACLQYRDR 427
GH+ V+ V F IVSAS D+T+KVWN +C+ +L GH +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGS 206
Query: 428 LVVSGSSDNTIRLXDIECXSCIXVLEGGPV 517
L SG D I L D+ + LE G +
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGSI 236
Score = 37.9 bits (84), Expect = 0.010
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +2
Query: 260 LVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DR 427
L GH V V+ D ++ +S S D +++W+ ++ E R GH + + + +R
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 428 LVVSGSSDNTIRLXDI--ECXSCIXVLEG 508
+VS S D TI+L + EC I +G
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGDG 147
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +2
Query: 266 GHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DRLV 433
GHR+ + V+F +++ S S D ++VW+T ++T GH GI+ +++ R V
Sbjct: 47 GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWV 106
Query: 434 VSGSSDNTIRLXDI 475
VSG DN +++ D+
Sbjct: 107 VSGGLDNVVKVWDL 120
Score = 48.4 bits (110), Expect = 7e-06
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +2
Query: 260 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DR 427
L GH + V+ V F +E +++ + IK+W+ + VR GH+ + +++
Sbjct: 3 LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE 62
Query: 428 LVVSGSSDNTIRLXDIECXSCIXVLEG 508
+ SGSSD +R+ D CI +G
Sbjct: 63 FLASGSSDTNLRVWDTRKKGCIQTYKG 89
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF-- 170
++ +GHT + +++ D R ++SG D+ V+VWD++ G +L+ H + L F
Sbjct: 84 IQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHP 143
Query: 171 CNGMMVTCSKDRSIXVWDM 227
++ T S DR++ WD+
Sbjct: 144 LEFLLATGSADRTVKFWDL 162
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDE--RAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC- 173
VR GH + +++ + SGSSD+ +RVWD + T H + + F
Sbjct: 42 VRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSP 101
Query: 174 -NGMMVTCSKDRSIXVWDMTS 233
+V+ D + VWD+T+
Sbjct: 102 DGRWVVSGGLDNVVKVWDLTA 122
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +2
Query: 269 HRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY 418
H + +DF E + + S DRT+K W+ + E + T G+ + +
Sbjct: 132 HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAF 183
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/80 (30%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Frame = +3
Query: 3 VRELQGHTGSVL--CLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHL---R 167
++ L G G++L + +D +++I+ +S + + VWDVS+G + +TL H + V + +
Sbjct: 266 IKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSK 325
Query: 168 FCNGMMVTCSKDRSIXVWDM 227
F + +V+ + DR+I +WD+
Sbjct: 326 FSSRHVVSAAYDRTIKLWDL 345
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 30 SVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC-NG-MMVTCSKD 203
+ +CL D + SG D +R+WD+ TG +L+ + H AV + NG ++T +D
Sbjct: 361 NAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRD 420
Query: 204 RSIXVWDMTSTTEI 245
V+D T T EI
Sbjct: 421 NVHNVFD-TRTLEI 433
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +2
Query: 260 LVGHR---AAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT-LNGHKXGIACLQYRDR 427
L GH AV+V F +++VSA+ DRTIK+W+ T L CL
Sbjct: 311 LTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICLSIDGL 370
Query: 428 LVVSGSSDNTIRLXDIECXSCIXVLEG 508
V SG D +RL DI+ + + G
Sbjct: 371 TVFSGHMDGNLRLWDIQTGKLLSEVAG 397
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2
Query: 290 VDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACL---QYRDRLVVSGSSDNTI 460
V D K +++A+ + VW+ SS TL GH + + ++ R VVS + D TI
Sbjct: 281 VTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTI 340
Query: 461 RLXDIECXSC 490
+L D+ C
Sbjct: 341 KLWDLHKGYC 350
Score = 37.5 bits (83), Expect = 0.013
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Frame = +3
Query: 12 LQGHTGSVLCL---QYDERAIISGSSDSTVRVWDVSTGAMLNTLI--HHCEAVLHLRFCN 176
L GHT V + ++ R ++S + D T+++WD+ G NT++ +C A+ L
Sbjct: 311 LTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAIC-LSIDG 369
Query: 177 GMMVTCSKDRSIXVWDMTSTTEIMLXECWWDTGPLSMSLTLTRN 308
+ + D ++ +WD+ T +L E + ++ S++L+RN
Sbjct: 370 LTVFSGHMDGNLRLWDI--QTGKLLSEVAGHSSAVT-SVSLSRN 410
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 6 RELQGHTGSVLCLQYD--ERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN- 176
R LQGH G V + +D +GS+D T+++WDV+TG + TL H V L N
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNR 223
Query: 177 -GMMVTCSKDRSIXVWDM 227
M + D+ + WD+
Sbjct: 224 HTYMFSAGDDKQVKCWDL 241
Score = 45.6 bits (103), Expect = 5e-05
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +2
Query: 260 LVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRL- 430
L GH V V Y+ SA D+ +K W+ + +R+ +GH G+ CL L
Sbjct: 208 LTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLD 267
Query: 431 -VVSGSSDNTIRLXDIECXSCIXVL 502
V++G D+ R+ DI I VL
Sbjct: 268 VVLTGGRDSVCRVWDIRTKMQIFVL 292
Score = 41.5 bits (93), Expect = 8e-04
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR- 427
VL GH V V FD ++ + S DRTIK+W+ ++ TL GH + L +R
Sbjct: 165 VLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRH 224
Query: 428 -LVVSGSSDNTIRLXDIECXSCIXVLEG 508
+ S D ++ D+E I G
Sbjct: 225 TYMFSAGDDKQVKCWDLEQNKVIRSYHG 252
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 30 SVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAV 155
SVL D + +I+GS DST++ WD+ G + T+ +H + V
Sbjct: 300 SVLARPTDPQ-VITGSHDSTIKFWDLRYGKSMATITNHKKTV 340
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSSCEFVRTLNGHKXGI--ACLQYRDRLVVSGSSDN 454
+++ S D TIK W+ + + T+ HK + L ++ VS S+DN
Sbjct: 310 VITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADN 359
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNGMMVT 191
L GHT +V+ L + SG+ D++++VW + + TL H V+ L + +++
Sbjct: 263 LLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWDQFLLS 322
Query: 192 CSKDRSIXVWDMT 230
CS D ++ +W T
Sbjct: 323 CSLDNTVKIWAAT 335
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVS 439
L+GH AV + + S + D +IKVW+ + + ++TL H + L D+ ++S
Sbjct: 263 LLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWDQFLLS 322
Query: 440 GSSDNTIRL 466
S DNT+++
Sbjct: 323 CSLDNTVKI 331
Score = 36.7 bits (81), Expect = 0.022
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN-- 176
++ L HT V+ L ++ ++S S D+TV++W + G L H E L C
Sbjct: 300 IQTLTEHTSVVMSLICWDQFLLSCSLDNTVKIWAATEGGNLEVTYTHKEEYGVLALCGVH 359
Query: 177 ----GMMVTCS-KDRSIXVWDMTSTTE 242
++ CS D S+ ++D+ S TE
Sbjct: 360 DAEAKPVLLCSCNDNSLHLYDLPSFTE 386
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +2
Query: 311 IVSASGDRTIKVW---NTSSC-EFVRTLNGHKXGIACLQYRDRLVVSGSSDNTIRLXDIE 478
+ + + D +I VW +T+SC + +L GH + L + SG+ DN+I++ ++
Sbjct: 236 LFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLD 295
Query: 479 CXSCIXVL 502
CI L
Sbjct: 296 NLQCIQTL 303
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 266 GHRAAVNVVDFD----EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DR 427
GHR V+ V F + IVSAS D+T+KVWN S+C+ TL GH ++ +
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGS 207
Query: 428 LVVSGSSDNTIRLXDIECXSCIXVLEGGPV 517
L SG D + L D+ + LE V
Sbjct: 208 LCASGGKDGVVLLWDLAEGKKLYSLEANSV 237
Score = 49.2 bits (112), Expect = 4e-06
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +3
Query: 6 RELQGHTGSV--LCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC-- 173
R L GH+ V + L D + +SGS D +R+WD++ G + H + VL + F
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLD 116
Query: 174 NGMMVTCSKDRSIXVWDMTSTTEIMLXE 257
N +V+ S+DR+I +W+ + + E
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISE 144
Score = 47.2 bits (107), Expect = 2e-05
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Frame = +2
Query: 263 VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNT-SSCEFVRTL--NGHKXGIACLQYRDR 427
VGH V V F D + IVSAS DRTIK+WNT C++ + GH+ ++C+++
Sbjct: 102 VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN 161
Query: 428 ----LVVSGSSDNTIRLXDI 475
+VS S D T+++ ++
Sbjct: 162 TLQPTIVSASWDKTVKVWNL 181
Score = 36.3 bits (80), Expect = 0.029
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = +2
Query: 260 LVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DR 427
L GH V V+ D ++ +S S D +++W+ ++ R GH + + + +R
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 428 LVVSGSSDNTIRLXDIECXSCIXVLEGG 511
+VS S D TI+L + + EGG
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGG 146
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVSGSS--DNTIRLXDIECX 484
+++ S D T+K+W + VRT GH G+A L +++ SS D+ +R+ D++
Sbjct: 33 LLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTN 92
Query: 485 SCIXVLEGGP 514
+ I VLE P
Sbjct: 93 ATIAVLEAPP 102
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Frame = +3
Query: 12 LQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF----- 170
+ GHT VL + D AI +GSSD TVR+WD+ A + T+ +H + V + F
Sbjct: 239 MSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGG 298
Query: 171 ---CNGMMVTCSKDRSIXVWD 224
G + + S D+S+ ++D
Sbjct: 299 TGVRAGRLASVSDDKSVSLYD 319
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY---DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC 173
+ +L+GH V L + D R + SGS D V + D +L ++ H VL +
Sbjct: 193 LHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDAS 252
Query: 174 --NGMMVTCSKDRSIXVWDM 227
G + T S DR++ +WD+
Sbjct: 253 PDGGAIATGSSDRTVRLWDL 272
Score = 31.5 bits (68), Expect = 0.83
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR- 427
L GH V + F D + + S S D + + + + +++GH + +
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDG 255
Query: 428 -LVVSGSSDNTIRLXDIECXSCIXVL 502
+ +GSSD T+RL D++ + I +
Sbjct: 256 GAIATGSSDRTVRLWDLKMRAAIQTM 281
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 GVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR 421
G + GH + V VD D I + S DRT+++W+ ++T++ H + + +R
Sbjct: 237 GSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFR 294
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 48.4 bits (110), Expect = 7e-06
Identities = 38/102 (37%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDE--KYIVSASGDRTIKVW----NTSSCEF----VRTLNGHKXGIAC 409
L H +AVN + E K + S + DR+I VW N E V L GH+ I C
Sbjct: 274 LTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMC 333
Query: 410 LQYRDRLVVSGSSDNTIR-----LXDIECXSCIXVLEGGPVP 520
L LV+SGS+D ++R L + E SC+ VLEG P
Sbjct: 334 LAVASDLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKP 375
Score = 35.1 bits (77), Expect = 0.067
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERAIISGSSDSTVRVW 101
V L+GH +++CL ++SGS+D ++RVW
Sbjct: 321 VGALRGHRKAIMCLAVASDLVLSGSADKSLRVW 353
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKXGI-ACLQYRDRLVVSGSSDNTIRL 466
D + SAS DR+ K+W TS + + ++ H I A + +D V +GS+D I++
Sbjct: 203 DGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVYTGSADKKIKV 260
Score = 31.5 bits (68), Expect = 0.83
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +2
Query: 269 HRAAVN-VVDFDEKYIVSASGDRTIKVWNTSSCE--FVRTLNGHKXGIACLQYRD--RLV 433
H A+N +V + ++ + S D+ IKVWN + V TL H + L + +++
Sbjct: 234 HDDAINAIVVSKDGFVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVL 293
Query: 434 VSGSSDNTI 460
SG+ D +I
Sbjct: 294 YSGACDRSI 302
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Frame = +3
Query: 3 VRELQGHTGSV--LCLQYDERAIISGSSDSTVRVWD-VSTG-------AMLNTLIHHCEA 152
V L H +V L + D + + SG+ D ++ VW+ + G +++ L H +A
Sbjct: 271 VATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKA 330
Query: 153 VLHLRFCNGMMVTCSKDRSIXVW 221
++ L + ++++ S D+S+ VW
Sbjct: 331 IMCLAVASDLVLSGSADKSLRVW 353
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERAIISGSSDSTVRVW--------DVSTGAMLNTLIHHCEAVLHLR 167
L+ + V L ++ + +GSS+S +RVW + STG N + + V L
Sbjct: 65 LKDKSSYVSSLAVSDKLLYTGSSNSEIRVWPREPPFSPEYSTGDDRNVVANGNGGVKSLV 124
Query: 168 FCNGMMVTCSKDRSIXVW 221
+++ +D I VW
Sbjct: 125 ILGDKLISAHQDHKIRVW 142
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 254 GVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCE 367
G L GHR A+ + ++S S D++++VW E
Sbjct: 322 GALRGHRKAIMCLAVASDLVLSGSADKSLRVWRRGLME 359
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +2
Query: 257 VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--D 424
V+ H +N V ++ + + S DRT +W V TL GHK I +++ D
Sbjct: 494 VVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVD 553
Query: 425 RLVVSGSSDNTIRLXDIECXSCIXVLEG 508
+ V++ S D T+++ I SC+ EG
Sbjct: 554 QCVMTASGDKTVKIWAISDGSCLKTFEG 581
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +2
Query: 260 LVGHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI--ACLQYRDR 427
L GH+ + V+F ++ +++ASGD+T+K+W S ++T GH + A
Sbjct: 537 LKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGT 596
Query: 428 LVVSGSSDNTIRLXDIECXSCI 493
VS +D ++L ++ CI
Sbjct: 597 QFVSCGADGLLKLWNVNTSECI 618
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY--DERAIISGSSD-STVRVWDVSTGAMLNTLIHHCEAVLHLRFC- 173
+ L G+ + +++ DE ++ +++ VRV+DV+T + L H E VL L C
Sbjct: 352 KRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCV 411
Query: 174 ----NGMMVTCSKDRSIXVWDMTS 233
N ++VT SKD+++ +W+ TS
Sbjct: 412 SSSGNVLIVTGSKDKTVRLWNATS 435
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +2
Query: 257 VLVGHRAAVNVVDF-----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR 421
VL GH+ V +D IV+ S D+T+++WN +S + GH I + +
Sbjct: 396 VLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFA 455
Query: 422 DR---LVVSGSSDNTIRLXDIE 478
+ VSGS D T+++ ++
Sbjct: 456 KKSFSFFVSGSGDRTLKVWSLD 477
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 9 ELQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHL--RFCNGM 182
E + T + L L D++ + S +RVWD+ T + + H V+ + G+
Sbjct: 57 EGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGL 116
Query: 183 MVTCSKDRSIXVWDM 227
+ T DR + VWD+
Sbjct: 117 LATAGADRKVLVWDV 131
Score = 38.3 bits (85), Expect = 0.007
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Frame = +2
Query: 146 RGGAAPALLQRDDGHL-----QQGSFXXXXXXXXXXXXNAXGVLVGHRAAVNVVDF---D 301
RG A A+L D G L QQ F LVG+ + + F +
Sbjct: 311 RGFTAAAMLPSDHGLLCVTADQQFFFYSVVENVEETELVLSKRLVGYNEEIADMKFLGDE 370
Query: 302 EKYIVSASGDRTIKVWN--TSSCEFVRTLNGHKXGI----ACLQYRDR-LVVSGSSDNTI 460
E+++ A+ ++V++ T SC +V L GHK + C+ L+V+GS D T+
Sbjct: 371 EQFLAVATNLEEVRVYDVATMSCSYV--LAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTV 428
Query: 461 RLXDIECXSCIXVLEG 508
RL + SCI V G
Sbjct: 429 RLWNATSKSCIGVGTG 444
Score = 37.1 bits (82), Expect = 0.017
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK---XGIACLQYRDRLVVSGSSDNTIRLX 469
D+K + SA R I+VW+ + + +R+ GH+ G+AC L+ + +D + +
Sbjct: 71 DDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMAC-HASGGLLATAGADRKVLVW 129
Query: 470 DIECXSCIXVLEG 508
D++ C G
Sbjct: 130 DVDGGFCTHYFRG 142
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +3
Query: 63 IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN---GMMVTCSKDRSIXVWDMTS 233
I++GS D TVR+W+ ++ + + H +L + F V+ S DR++ VW +
Sbjct: 419 IVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDG 478
Query: 234 TTE 242
+E
Sbjct: 479 ISE 481
Score = 35.9 bits (79), Expect = 0.038
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Frame = +3
Query: 15 QGHTGSVLCLQY----DERAIISGSSDSTVRVWDVST----GAMLNTLIHHCEAVLHLRF 170
+GH G V + + ++ +ISGS D+TVRVWD++ L + H AV +
Sbjct: 141 RGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIAL 200
Query: 171 C-NGM-MVTCSKDRSIXVWDM 227
+G+ + + +D+ + +WD+
Sbjct: 201 SEDGLTLFSAGRDKVVNLWDL 221
Score = 34.7 bits (76), Expect = 0.089
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = +2
Query: 287 VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DRLVVSGSSDNTI 460
+V D +I A GD I + +++ T+ G + L D+L+ S I
Sbjct: 26 IVSSDGSFIACACGD-VINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQI 84
Query: 461 RLXDIECXSCIXVLEG--GPVPNFA 529
R+ D+E CI +G GPV A
Sbjct: 85 RVWDLETLKCIRSWKGHEGPVMGMA 109
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY----RDRLVVSGSSDNTIRLXDIE 478
+ +A DR + VW+ GHK ++ + + +++SGS D T+R+ D+
Sbjct: 117 LATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLN 176
Query: 479 CXS----CIXVLE 505
+ C+ ++E
Sbjct: 177 AKNTEKKCLAIME 189
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +2
Query: 308 YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVSGSSDNTIRLXDIECXS 487
++ + SGD TIK W+ + T++GHK ++ L + ++ SGS D T+RL + S
Sbjct: 599 HVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNGVLYSGSWDGTVRLWSLSDNS 658
Query: 488 CIXVL 502
+ VL
Sbjct: 659 LLTVL 663
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +3
Query: 21 HTGSVLCLQYDERA-IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNGMMVTCS 197
+TG + L Y E + +GS D+T++ W + G++L T+ H V L NG++ + S
Sbjct: 586 YTG-IHALAYSEYGHVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNGVLYSGS 644
Query: 198 KDRSIXVWDMTSTT 239
D ++ +W ++ +
Sbjct: 645 WDGTVRLWSLSDNS 658
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTL 134
+ GH V L + SGS D TVR+W +S ++L L
Sbjct: 623 MSGHKSVVSTLVVVNGVLYSGSWDGTVRLWSLSDNSLLTVL 663
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/80 (22%), Positives = 32/80 (40%)
Frame = +2
Query: 164 ALLQRDDGHLQQGSFXXXXXXXXXXXXNAXGVLVGHRAAVNVVDFDEKYIVSASGDRTIK 343
AL + GH+ GS + + GH++ V+ + + S S D T++
Sbjct: 591 ALAYSEYGHVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNGVLYSGSWDGTVR 650
Query: 344 VWNTSSCEFVRTLNGHKXGI 403
+W+ S + L GI
Sbjct: 651 LWSLSDNSLLTVLGEETPGI 670
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 47.2 bits (107), Expect = 2e-05
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Frame = +2
Query: 266 GHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG---HKXGIACLQYRDR- 427
GH V DF D K I + S D ++ VWN +CE + + G H G+ CL
Sbjct: 195 GHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNS 254
Query: 428 -LVVSGSSDNTIRLXDI 475
L +SGS D ++ + +I
Sbjct: 255 SLAISGSKDGSVHIVNI 271
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACL--QYRDRLVVSGSSDNTIRLXD 472
D + + GD +W + ++ L GHK ++CL Y +L+ SG D +++ D
Sbjct: 82 DATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFD 141
Query: 473 IECXSCIXVLEG 508
+ VL+G
Sbjct: 142 ASSGTLKCVLDG 153
Score = 37.1 bits (82), Expect = 0.017
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +3
Query: 9 ELQGHTGSVLCL--QYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF-CNG 179
EL GH SV CL YD + + SG D V+++D S+G + L + +R+ G
Sbjct: 108 ELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRG 167
Query: 180 MMVTC-SKDRSIXVWD 224
+V S+D S+ +W+
Sbjct: 168 HIVLAGSEDCSLWMWN 183
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/70 (20%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DRLVVSGSSDNTIRLXDIECX 484
+++ S D ++ +WN ++ +GH + C + +L+ +GS D ++ + + +
Sbjct: 170 VLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTC 229
Query: 485 SCIXVLEGGP 514
I +++G P
Sbjct: 230 ESIHIVKGHP 239
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 305 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR--LVVSGSSDNTIRLXD 472
KY+ + + T+ +W++ V T +GH+ + + +VS S DNT R+ +
Sbjct: 341 KYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFE 398
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 308 YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DRLVVSGSSDNTIRLXDIEC 481
YI + S D+T+++W+ + E VR GH+ + L R + SG D TI + D+
Sbjct: 513 YIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST 572
Query: 482 XSCIXVLEG 508
CI L G
Sbjct: 573 ARCITPLMG 581
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Frame = +2
Query: 257 VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--RD 424
+ +GHR+ V + D +Y+ S D TI +W+ S+ + L GH + L Y
Sbjct: 536 IFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEG 595
Query: 425 RLVVSGSSDNTIRLXDI 475
L+ SGS+D T++L D+
Sbjct: 596 SLLASGSADCTVKLWDV 612
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +2
Query: 308 YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVSGSSDNTIRLXDIECXS 487
Y S S DRT ++W+ + +R + GH + + +GSSD T+RL D++
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIMAGHLSDVD-WHPNCNYIATGSSDKTVRLWDVQTGE 532
Query: 488 CIXVLEG 508
C+ + G
Sbjct: 533 CVRIFIG 539
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 63 IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC--NGMMVTCSKDRSIXVWDMTS 233
I +GSSD TVR+WDV TG + I H VL L M + +D +I +WD+++
Sbjct: 514 IATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST 572
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC--NG 179
L GH+G V + ++S S+D+T+R+W A L H V +F
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 180 MMVTCSKDRSIXVWDM 227
+CS DR+ +W M
Sbjct: 474 YFASCSHDRTARIWSM 489
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAML 125
+ L GH V L Y + SGS+D TV++WDV++ L
Sbjct: 576 ITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKL 618
Score = 32.3 bits (70), Expect = 0.47
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--D 424
+L+GH V F +++S+S D TI++W+T + GH + Q+
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG 472
Query: 425 RLVVSGSSDNTIRLXDIECXSCIXVLEG 508
S S D T R+ ++ + ++ G
Sbjct: 473 HYFASCSHDRTARIWSMDRIQPLRIMAG 500
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIA--CLQYRDR 427
L GHR AV FD +Y+++ S DR +K+W+ + + + GH+ I + +
Sbjct: 301 LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNA 360
Query: 428 LVVSGSSDNTIRLXDIECXSCIXVLEG 508
LV S S+D IR+ + I VL G
Sbjct: 361 LVASASNDFVIRVWRLPDGMPISVLRG 387
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDE--RAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC- 173
+++L+GH +V C +D R +I+GS D V++W + T L + H + L
Sbjct: 298 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSS 357
Query: 174 -NGMMVTCSKDRSIXVW 221
N ++ + S D I VW
Sbjct: 358 NNALVASASNDFVIRVW 374
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = +2
Query: 266 GHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR---- 427
GH + V + + SAS D I+VW + L GH + + + R
Sbjct: 345 GHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASV 404
Query: 428 -LVVSGSSDNTIRLXD 472
++S S D T R+ D
Sbjct: 405 YQLLSSSDDGTCRIWD 420
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDER-----AIISGSSDSTVRVWD 104
L+GHTG+V + + R ++S S D T R+WD
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWD 420
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = +2
Query: 281 VNVV--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQ---YRDRLVVSGS 445
VN++ D +++++A D I VWN + V L GH L + R+ +S
Sbjct: 600 VNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAG 659
Query: 446 SDNTIRLXDI 475
D + DI
Sbjct: 660 YDGKTIIWDI 669
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 51 DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEA--VLHLR-FCNGMMVTCSKDRSIXVW 221
D R +++ D + VW+ + G++++ L H E+ VL + F + ++ D +W
Sbjct: 608 DNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAGYDGKTIIW 667
Query: 222 DMTSTTEIMLXE 257
D+ I + E
Sbjct: 668 DIWEGIPIKVYE 679
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +3
Query: 33 VLCLQYDERAII--SGSSDSTVRVWDVS 110
+LC Y+ I +GSSDS RVW S
Sbjct: 452 ILCCAYNANGTIFVTGSSDSNARVWSAS 479
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 12 LQGH-TGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNGMMV 188
L+GH +G V C + SGS D T++VWD++T TL H V L + ++
Sbjct: 307 LEGHHSGEVTCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWDKCLI 366
Query: 189 TCSKDRSIXVW 221
+ S D +I +W
Sbjct: 367 SSSLDGTIKLW 377
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 269 HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVSGSS 448
H V + + S S D+TIKVW+ ++ + TL H + L D+ ++S S
Sbjct: 311 HSGEVTCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWDKCLISSSL 370
Query: 449 DNTIRL 466
D TI+L
Sbjct: 371 DGTIKL 376
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSSCE-----FVRTLNGHKXG-IACLQYRDRLVVSGSSDNTIRLXD 472
+ + + +I VW + E ++ +L GH G + C ++ SGS D TI++ D
Sbjct: 279 LFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVWD 338
Query: 473 IECXSCIXVLE 505
+ C L+
Sbjct: 339 LNTLQCRMTLK 349
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTL 134
L+ H G+V L ++ +IS S D T+++W S L +
Sbjct: 348 LKQHIGTVTSLLCWDKCLISSSLDGTIKLWACSENESLKVV 388
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 46.0 bits (104), Expect = 4e-05
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +2
Query: 305 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI-ACLQYRD-RLVVSGSSDNTIRLXDIE 478
KY+ +AS D+T+K+WN + + L GH+ + C+ D +V+ SSD T RL +
Sbjct: 224 KYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMP 283
Query: 479 CXSCIXVLEG 508
+ V +G
Sbjct: 284 AGKEVKVYQG 293
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +3
Query: 3 VRELQGHTGSVL-CLQYD-ERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC- 173
+ +LQ H G +L CL + + + SSD TV++W+V + L H V F
Sbjct: 204 LHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSV 263
Query: 174 -NGMMVTCSKDRSIXVWDMTSTTEIMLXE 257
+VT S D + +W M + E+ + +
Sbjct: 264 DGEFLVTASSDMTARLWSMPAGKEVKVYQ 292
Score = 35.5 bits (78), Expect = 0.051
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 257 VLVGHRAAV--NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRD 424
VL GH+ V V D +++V+AS D T ++W+ + + V+ GH C D
Sbjct: 248 VLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCCALHD 305
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 3 VRELQGHTGSVLCL--QYDERAIISGSSDSTVRVWDV 107
V HT +V+ + Q D + + SGS D TV++WD+
Sbjct: 71 VMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDL 107
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +2
Query: 269 HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG-HKXGIACLQYRDRLVVS 439
H V V F D K++ S S D T+K+W+ + + L ++S
Sbjct: 77 HTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVAAVNTVVLHPNQTELIS 136
Query: 440 GSSDNTIRLXDIECXSC 490
G + IR+ D+ SC
Sbjct: 137 GDQNGNIRVWDLRANSC 153
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 45.6 bits (103), Expect = 5e-05
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 12 LQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAV--LHLRFCNG 179
L+GH G+VL ++ D ++ D T+R+W+ G ++ T H V +H+ N
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 180 MMVTCSKDRSIXVWDMTS 233
+C DR + WD+++
Sbjct: 74 KFCSCGGDRQVYYWDVST 91
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +3
Query: 51 DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF--CNGMMVTCSKDRSIXVWD 224
D S D V WDVSTG ++ H V ++F + ++V+ DRS+ VWD
Sbjct: 71 DNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
Query: 225 MT--STTEIMLXECWWDTGPLSMSLTLTRNI 311
S + + + + DT +S+ LT T I
Sbjct: 131 CRSHSVEPVQIIDTFLDT-VMSVVLTKTEII 160
Score = 37.5 bits (83), Expect = 0.013
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 290 VDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRD--RLVVSGSSDNTIR 463
V D S GDR + W+ S+ +R GH + +++ D +VVS D ++R
Sbjct: 68 VTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLR 127
Query: 464 LXDIECXS 487
+ D S
Sbjct: 128 VWDCRSHS 135
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 257 VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 391
+L GH AV F D Y ++ DRTI++WN ++T H
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSH 59
Score = 31.9 bits (69), Expect = 0.63
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +3
Query: 39 CLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF--CNGMMVTCSKDRSI 212
CL + +I GS D V WD+ +L+ H V + + M+T S D +I
Sbjct: 235 CLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTI 294
Query: 213 XVW 221
VW
Sbjct: 295 RVW 297
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +3
Query: 6 RELQGHTGS-VLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC- 173
RE+ + G V C+ D +++G DST+R+ D +TG +L H C
Sbjct: 177 REMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCL 236
Query: 174 ---NGMMVTCSKDRSIXVWDM 227
+ ++ S+D + WD+
Sbjct: 237 TNSDAHVIGGSEDGLVFFWDL 257
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 45.6 bits (103), Expect = 5e-05
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLN-GHKXGIACLQY---- 418
L GH+ VN + ++ ++S S D I +WN SS + + +++ GH I C ++
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 419 RDRLVVSGSSDNTIRL 466
D LVVSG+ D +RL
Sbjct: 106 SDELVVSGAGDAEVRL 121
Score = 34.7 bits (76), Expect = 0.089
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +3
Query: 6 RELQGHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAMLNTL 134
+EL+GH G V L ++ +ISGS D + +W+ S+ +L+++
Sbjct: 44 QELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSI 88
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 63 IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC---NGMMVTCSKDRSIXVWDMTS 233
I SGS D +W+ TG ++ L+ E+VL+ C + ++ T D +I +W T+
Sbjct: 636 IASGSDDGRWFIWEKQTGRLMKVLVGD-ESVLNCIQCHPFDSVVATSGIDNTIKIWSPTA 694
Query: 234 T 236
+
Sbjct: 695 S 695
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 305 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DRLVVSGSSDNTIRL 466
+YI S S D +W + ++ L G + + C+Q D +V + DNTI++
Sbjct: 634 EYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKI 689
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 45.6 bits (103), Expect = 5e-05
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +3
Query: 12 LQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAV---LHLRFCN 176
L+GH ++L L + D I+S S D TVR WDV TG + + H V R
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGP 151
Query: 177 GMMVTCSKDRSIXVWDM 227
++++ S D + +WDM
Sbjct: 152 PLIISGSDDGTAKLWDM 168
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEKYIVSASG--DRTIKVWNT-SSCEFVRTLNGHKXGIACLQYRD- 424
+L GH +AV + F+ + ASG DR I +W C+ L GHK I L +
Sbjct: 48 LLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSD 107
Query: 425 -RLVVSGSSDNTIRLXDIE 478
+VS S D T+R D+E
Sbjct: 108 GSQIVSASPDKTVRAWDVE 126
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Frame = +2
Query: 257 VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI-ACLQYR-- 421
VL GH+ A+ + + D IVSAS D+T++ W+ + + ++ + H + +C R
Sbjct: 91 VLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRG 150
Query: 422 DRLVVSGSSDNTIRLXDI 475
L++SGS D T +L D+
Sbjct: 151 PPLIISGSDDGTAKLWDM 168
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI-ACLQY-RDRLVVSGSSDNTIRLXD 472
D + + S DR + +W+T+S + L GH + C+ + + ++ S SSD I L +
Sbjct: 283 DGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGE 342
Query: 473 I 475
I
Sbjct: 343 I 343
Score = 31.9 bits (69), Expect = 0.63
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = +3
Query: 63 IISGSSDSTVRVWDVSTGAMLNTLIHHCE-AVLHLRFCNGMMVTCSKDRSIXVWDMTSTT 239
IISGS D T ++WD+ + T + + + T D + VWD+
Sbjct: 154 IISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGE 213
Query: 240 EIMLXECWWDT 272
M E DT
Sbjct: 214 ATMTLEGHQDT 224
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 51 DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF--CNGMMVTCSKDRSIXVWD 224
D + +GSSD V +WD ++ + L H +V F ++ +CS D++I + +
Sbjct: 283 DGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGE 342
Query: 225 M 227
+
Sbjct: 343 I 343
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Frame = +2
Query: 278 AVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIA--CLQYRDRLVVSGSSD 451
AV+ D +K I + D +KVW+ E TL GH+ I L +++ D
Sbjct: 185 AVSFSDAADK-IFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMD 243
Query: 452 NTIRLXDIECXS----CIXVLEG 508
N + + D+ + C+ + EG
Sbjct: 244 NKLCVWDMRPYAPQNRCVKIFEG 266
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 45.2 bits (102), Expect = 6e-05
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Frame = +3
Query: 21 HTGSVLCLQYDE--RAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNG--MMV 188
H G+V L+Y++ + SGS D+ + +WDV + L L H + V L F +G +V
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 189 TCSKDRSIXVWDM 227
+ SKD+ + VWD+
Sbjct: 165 SSSKDKFLRVWDL 177
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRD--RLVVSGSSDNTIRLXD 472
D K+I A D T+KV+ S +F +L GHK + C+ L+V+GS D +++
Sbjct: 551 DAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWG 610
Query: 473 IECXSC 490
++ C
Sbjct: 611 LDFGDC 616
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 308 YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR--LVVSGSSDNTIRLXD 472
Y+ S DR +K W+ E + TL GH I CL +R +V+GS D ++R D
Sbjct: 638 YLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +2
Query: 269 HRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRD--RLVV 436
H+ AV + +++ + S S D I +W+ + L GH+ + L + D + +V
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 437 SGSSDNTIRLXDIECXSCIXVLEG 508
S S D +R+ D+E C+ ++ G
Sbjct: 165 SSSKDKFLRVWDLETQHCMQIVSG 188
Score = 37.9 bits (84), Expect = 0.010
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +2
Query: 275 AAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DRLVVSGSS 448
A ++ + D +I++W+T N HK + L+Y ++ SGS
Sbjct: 67 AVTSIASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSK 126
Query: 449 DNTIRLXDIECXSCIXVLEG 508
DN I L D+ S + L G
Sbjct: 127 DNDIILWDVVGESGLFRLRG 146
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 72 GSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF--CNGMMVTCSKDRSIXVWDM 227
G +D ++R+WD G H AV LR+ M+ + SKD I +WD+
Sbjct: 82 GYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDV 135
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--RDR 427
L GHR V + F + K +VS+S D+ ++VW+ + ++ ++GH + + +R
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEER 203
Query: 428 LVVSGSSDNTIRLXDIE 478
VV+GS+D +R ++
Sbjct: 204 YVVTGSADQELRFYAVK 220
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 9 ELQGHTGSVLCLQYDE-RAIISGSSDSTVRVWDVSTGAMLNTL 134
E QGH V + E ++ +S S V++W+ STG+ L T+
Sbjct: 401 EHQGHRSDVRSVTLSEDNTLLMSTSHSEVKIWNPSTGSCLRTI 443
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/71 (21%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 266 GHRAAVNVVDFDE-KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVSG 442
GHR+ V V E ++ ++ +K+WN S+ +RT++ + + +++ + G
Sbjct: 404 GHRSDVRSVTLSEDNTLLMSTSHSEVKIWNPSTGSCLRTIDSGYGLCSLIVPQNKYGIVG 463
Query: 443 SSDNTIRLXDI 475
+ + + DI
Sbjct: 464 TKSGVLEIIDI 474
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 44.8 bits (101), Expect = 8e-05
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Frame = +2
Query: 269 HRAAVNVVDFDEKYI--VSASGDRTIKVWNTSSCEF-VRTLNGHKXGIACLQY---RDRL 430
H A + + F + ++S D+T++VW+ + + +RT GH + L + +D L
Sbjct: 692 HTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDL 751
Query: 431 VVSGSSDNTIRLXDIECXSCIXVLEGG 511
+ S +DN IR I SC V +GG
Sbjct: 752 ICSCDNDNEIRYWSINNGSCTRVYKGG 778
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Frame = +3
Query: 12 LQGHTGSVLCLQYD--ERAIISGSSDSTVRVWDV-STGAMLNTLIHHCEAVLHLRF---C 173
L+ HT + +++ + + + S D TVRVWD + G L T + H V L F
Sbjct: 689 LEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIK 748
Query: 174 NGMMVTCSKDRSIXVWDMTS 233
+ ++ +C D I W + +
Sbjct: 749 DDLICSCDNDNEIRYWSINN 768
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERA-IISGSSDSTVRVWDVSTGAMLNTLIHH--CEAVLHLRFC 173
+ E +GH G +L L + E+ ++S S D TVR+W V L T H+ V
Sbjct: 315 LHEFKGHIGEILDLSWSEKGYLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCVAFNPVD 374
Query: 174 NGMMVTCSKDRSIXVWDMT 230
+ ++ S D + +WD+T
Sbjct: 375 DNYFISGSIDGKVRIWDVT 393
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVS 110
+E H GS+L +++ D + I S D VRVW ++
Sbjct: 212 QEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSIT 248
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERA-IISGSSDSTVRVWDVSTGAMLNTLIHH--CEAVLHLRFC 173
+ E +GH G +L L + E+ ++S S D TVR+W V L T H+ V
Sbjct: 315 LHEFKGHIGEILDLSWSEKGYLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCVAFNPVD 374
Query: 174 NGMMVTCSKDRSIXVWDMT 230
+ ++ S D + +WD+T
Sbjct: 375 DNYFISGSIDGKVRIWDVT 393
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVS 110
+E H GS+L +++ D + I S D VRVW ++
Sbjct: 212 QEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSIT 248
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +2
Query: 290 VDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACL--QYRDRLVVSGSSDNTIR 463
V D +Y+ + DR + +W+ + E V+ GH+ ++CL +Y + SGS D T++
Sbjct: 230 VSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVK 289
Query: 464 LXDIE 478
+ ++E
Sbjct: 290 VWNVE 294
Score = 37.1 bits (82), Expect = 0.017
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +3
Query: 3 VRELQGH--TGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHL-RFC 173
V+ GH T S LC +Y + SGS D TV+VW+V A + H +L +
Sbjct: 257 VQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQGEILAIDALR 316
Query: 174 NGMMVTCSKDRSIXVWDMTSTTEIM 248
+T +DR++ + +T ++
Sbjct: 317 KERALTVGRDRTMLYHKVPESTRMI 341
Score = 35.1 bits (77), Expect = 0.067
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 266 GHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACL 412
GHR V+ + F + S S DRT+KVWN F+ +GH+ I +
Sbjct: 262 GHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQGEILAI 312
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +3
Query: 9 ELQGHTGSVLCLQYDE--RAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN-- 176
+L+GHT +V L D R +SGSSDS +R+WD+ L+T H ++V L CN
Sbjct: 250 KLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALA-CNPS 308
Query: 177 -GMMVTCSKDRSIXVWDMTSTTEIML 251
+ + +D+ + + D+ + ++L
Sbjct: 309 FSHVYSGGRDQCLYLTDLATRESVLL 334
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +3
Query: 15 QGHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAMLNTLIHHCE--AVLHLRFCNGM 182
+GH SV L ++ ++SG ++ +RVWD TG+ L H + VL L
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 183 MVTCSKDRSIXVWDM 227
++ S D I +WD+
Sbjct: 270 CLSGSSDSMIRLWDL 284
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +2
Query: 266 GHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACL--QYRDRLV 433
GH+ +V + ++ +VS ++ ++VW+ + L GH + L R
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 434 VSGSSDNTIRLXDIECXSCI 493
+SGSSD+ IRL D+ C+
Sbjct: 271 LSGSSDSMIRLWDLGQQRCL 290
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 302 EKYIVSASGDRTIKVWN-TSSCEFVRTLNGHKXGIACLQY---RDRLVVSGSSDNTIRLX 469
E +VS S D T+K W+ S RTL H + CL + +V SG + +
Sbjct: 95 ESTLVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIW 154
Query: 470 DIE 478
DIE
Sbjct: 155 DIE 157
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +3
Query: 54 ERAIISGSSDSTVRVWD-VSTGAMLNTLIHHCEAVLHLRFC---NGMMVTCSKDRSIXVW 221
E ++S SSD+TV+ WD +S G TL H + V L N ++ + + +W
Sbjct: 95 ESTLVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIW 154
Query: 222 DM 227
D+
Sbjct: 155 DI 156
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +3
Query: 9 ELQGHTGSVLCLQYDE--RAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN-- 176
+L+GHT +V L D R +SGSSDS +R+WD+ L+T H ++V L CN
Sbjct: 250 KLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALA-CNPS 308
Query: 177 -GMMVTCSKDRSIXVWDMTSTTEIML 251
+ + +D+ + + D+ + ++L
Sbjct: 309 FSHVYSGGRDQCLYLTDLATRESVLL 334
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +3
Query: 15 QGHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAMLNTLIHHCE--AVLHLRFCNGM 182
+GH SV L ++ ++SG ++ +RVWD TG+ L H + VL L
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 183 MVTCSKDRSIXVWDM 227
++ S D I +WD+
Sbjct: 270 CLSGSSDSMIRLWDL 284
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +2
Query: 266 GHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACL--QYRDRLV 433
GH+ +V + ++ +VS ++ ++VW+ + L GH + L R
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 434 VSGSSDNTIRLXDIECXSCI 493
+SGSSD+ IRL D+ C+
Sbjct: 271 LSGSSDSMIRLWDLGQQRCL 290
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 302 EKYIVSASGDRTIKVWN-TSSCEFVRTLNGHKXGIACLQY---RDRLVVSGSSDNTIRLX 469
E +VS S D T+K W+ S RTL H + CL + +V SG + +
Sbjct: 95 ESTLVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIW 154
Query: 470 DIE 478
DIE
Sbjct: 155 DIE 157
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +3
Query: 54 ERAIISGSSDSTVRVWD-VSTGAMLNTLIHHCEAVLHLRFC---NGMMVTCSKDRSIXVW 221
E ++S SSD+TV+ WD +S G TL H + V L N ++ + + +W
Sbjct: 95 ESTLVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIW 154
Query: 222 DM 227
D+
Sbjct: 155 DI 156
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/80 (32%), Positives = 41/80 (51%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNGMMVT 191
L GH G + L D +I SGS D +VR+WD S+ + TL H + V L + +
Sbjct: 253 LWGHEGPITSLALDMTSIFSGSWDMSVRIWDRSSMKCVKTL-RHSDWVWGLAPHETTLAS 311
Query: 192 CSKDRSIXVWDMTSTTEIML 251
S + +WD++S T + +
Sbjct: 312 TS-GSDVYIWDVSSETPLAI 330
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVS 439
L GH + + D I S S D ++++W+ SS + V+TL H + L + + S
Sbjct: 253 LWGHEGPITSLALDMTSIFSGSWDMSVRIWDRSSMKCVKTLR-HSDWVWGLAPHETTLAS 311
Query: 440 GSSDNTIRLXDIECXSCIXVL 502
+S + + + D+ + + ++
Sbjct: 312 -TSGSDVYIWDVSSETPLAII 331
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI-ACLQYRDRLVVSGSSDNTIRL 466
D++ + S S D+T KVW S V ++N H+ + A + D LV +GS+D T+++
Sbjct: 222 DKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDGLVFTGSADGTVKV 278
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +3
Query: 30 SVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAV-LHLRFCNGMMVTCSKDR 206
S L L D+R + SGS D T +VW VS + ++ H +AV + +G++ T S D
Sbjct: 215 SCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDGLVFTGSADG 274
Query: 207 SIXVW 221
++ VW
Sbjct: 275 TVKVW 279
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 290 VDFDEKYIVSASGDRTIKVWNT-SSCEFVRTLNGHKXGIACLQYRDRLVVSGSSDNTIRL 466
VD + S D T+ W ++ + L GHK + CL L+ SGS+D IR+
Sbjct: 308 VDQSATLVYCGSSDGTVNFWERENNMKNGGVLKGHKLAVLCLVAAGNLMFSGSADLGIRV 367
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERAIISGSSDSTVRVW 101
L+GH +VLCL + SGS+D +RVW
Sbjct: 339 LKGHKLAVLCLVAAGNLMFSGSADLGIRVW 368
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +2
Query: 254 GVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN--TSSCEFV--RTLNGHKXGIACLQY- 418
GVL GH+ AV + + S S D I+VW E V L GH + CL
Sbjct: 337 GVLKGHKLAVLCLVAAGNLMFSGSADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVE 396
Query: 419 RDRLVVSG 442
RD+ VSG
Sbjct: 397 RDQESVSG 404
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +3
Query: 30 SVLCLQYDERA--IISGSSDSTVRVWDVSTGAMLN--TLIHHCEAVLHLRFCNGMMVTCS 197
+V + D+ A + GSSD TV W+ M N L H AVL L +M + S
Sbjct: 302 AVTAIAVDQSATLVYCGSSDGTVNFWERENN-MKNGGVLKGHKLAVLCLVAAGNLMFSGS 360
Query: 198 KDRSIXVW 221
D I VW
Sbjct: 361 ADLGIRVW 368
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +2
Query: 263 VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVV 436
+ H AV+ + D+ + SAS DRT+KVW + + ++ H + + + LV
Sbjct: 132 IKHSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAESLVF 191
Query: 437 SGSSDNTIRL 466
+GS+D T+++
Sbjct: 192 TGSADGTVKV 201
Score = 33.5 bits (73), Expect = 0.20
Identities = 26/108 (24%), Positives = 39/108 (36%), Gaps = 6/108 (5%)
Frame = +2
Query: 170 LQRDDGHLQQGSFXXXXXXXXXXXXNAXGVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 349
L D G L S+ + H AVN V E + + S D T+KVW
Sbjct: 143 LAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAESLVFTGSADGTVKVW 202
Query: 350 ------NTSSCEFVRTLNGHKXGIACLQYRDRLVVSGSSDNTIRLXDI 475
++ +TL + + L V SGSSD + ++
Sbjct: 203 KREIRGKRTAHSLFQTLLKQESAVTALVTSHMAVYSGSSDGAVNFWEM 250
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = +3
Query: 30 SVLCLQYDERAIISGSSDSTVRVWDVSTGAML---NTLIHHCEAVLHLRFCNGMMVTCSK 200
+V L A+ SGSSD V W++ +L H AVL + ++ + +
Sbjct: 225 AVTALVTSHMAVYSGSSDGAVNFWEMGDKKLLKHCEVFKKHRLAVLCIAAAGKLLFSGAA 284
Query: 201 DRSIXVWDMTSTTEIMLXECWWDTGPL 281
D+ I VW + TGP+
Sbjct: 285 DKKICVWRREGKVHTCVSVLTGHTGPV 311
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 44.0 bits (99), Expect = 1e-04
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Frame = +2
Query: 269 HRAAVNVVDF--DEKYIVSASGDRTIKVW---NTSSCEFVR-TLNGHKXGIACLQYRDRL 430
H++AVN + D + S S DR+I VW +TS+ VR L GH I L L
Sbjct: 279 HKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLFNVSDL 338
Query: 431 VVSGSSDNTIRL---XDIECXSCIXVLEGGPVP 520
++SGS+D T+R+ SC+ VL G P
Sbjct: 339 LLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKP 371
Score = 37.5 bits (83), Expect = 0.013
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 263 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI-ACLQYRDRLVVS 439
+ H AV + + +I S S D+T+K+W S ++ H + A + V +
Sbjct: 192 IEHADAVTALAVSDGFIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTVYT 251
Query: 440 GSSDNTIRL 466
GS+D IR+
Sbjct: 252 GSADRRIRV 260
Score = 37.1 bits (82), Expect = 0.017
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = +3
Query: 63 IISGSSDSTVRVWDVSTGAMLNTLI----HHCEAV--LHLRFCNGMMVTCSKDRSIXVWD 224
+ +GS+D +RVW TG +TL+ H AV L L ++ + S DRSI VW+
Sbjct: 249 VYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWE 308
Query: 225 MTSTTEIM 248
T+ M
Sbjct: 309 REDTSNYM 316
Score = 36.3 bits (80), Expect = 0.029
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Frame = +3
Query: 3 VRELQGHTGSV--LCLQYDERAIISGSSDSTVRVW---DVSTG-AMLNTLIHHCEAVLHL 164
V L+ H +V L L D + SGS D ++ VW D S A+ L H +A+L L
Sbjct: 273 VATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL 332
Query: 165 RFCNGMMVTCSKDRSIXVW 221
+ ++++ S DR++ +W
Sbjct: 333 FNVSDLLLSGSADRTVRIW 351
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Frame = +2
Query: 254 GVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN---TSSCEFVRTLNGHKXGIACL-QYR 421
G L GH A+ + ++S S DRT+++W SS + L+GH + L R
Sbjct: 320 GALRGHDKAILSLFNVSDLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVR 379
Query: 422 DR------LVVSGSSDNTIR 463
++ ++SGS D ++
Sbjct: 380 EKELDDVVSIISGSLDGEVK 399
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 11/61 (18%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY-----------DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEA 152
+ L GHTGSVLCL +ISGS D T+R+WD+ +G ++ + HH
Sbjct: 522 QRLLGHTGSVLCLAAHRMFGDANGCNSSHVLISGSMDCTIRIWDLESGNVIMIMHHHVAP 581
Query: 153 V 155
V
Sbjct: 582 V 582
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF-- 170
V L+GHT V+ L + D+ + SGS D+TV +W++ TG L H V + +
Sbjct: 111 VMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDP 170
Query: 171 CNGMMVTCSKDRSIXVW 221
+ + S D+++ +W
Sbjct: 171 IGSFIASQSDDKTVIIW 187
Score = 35.5 bits (78), Expect = 0.051
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +2
Query: 179 DDGHLQQGSFXXXXXXXXXXXXNAXGVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWN 352
DD L GS VL GH + V V +D +I S S D+T+ +W
Sbjct: 129 DDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWR 188
Query: 353 TSSCEFVRTLNGH 391
TS +GH
Sbjct: 189 TSDWGMAHRTDGH 201
Score = 34.7 bits (76), Expect = 0.089
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 371 VRTLNGHKXGIACLQYR--DRLVVSGSSDNTIRLXDIECXSCIXVLEG 508
V TL GH + L + D ++ SGS DNT+ + ++ C VL G
Sbjct: 111 VMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRG 158
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 43.2 bits (97), Expect = 3e-04
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +2
Query: 260 LVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR-- 427
L GHR AV ++D +Y+++ S DR +KVW+ + + + GH+ I L
Sbjct: 241 LRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNI 300
Query: 428 LVVSGSSDNTIRLXDIECXSCIXVLEG 508
+ S S+D IR+ + + VL G
Sbjct: 301 FIASASNDCVIRVWRLPDGLPVSVLRG 327
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Frame = +2
Query: 266 GHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR---- 427
GH + V + +I SAS D I+VW V L GH + + + R
Sbjct: 285 GHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSP 344
Query: 428 -LVVSGSSDNTIRLXD 472
++S S D T R+ D
Sbjct: 345 YQLLSSSDDGTCRIWD 360
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDER-----AIISGSSDSTVRVWD 104
V L+GHTG+V + + R ++S S D T R+WD
Sbjct: 322 VSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWD 360
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = +2
Query: 281 VNVV--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQ---YRDRLVVSGS 445
VN++ D +++++A D I VWN S V +L GH + + R+ +S
Sbjct: 547 VNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMSAG 606
Query: 446 SDNTIRLXDI 475
D + DI
Sbjct: 607 YDGKTIVWDI 616
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +2
Query: 308 YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVSGSSDNTIRLXDIECXS 487
YI + ++VW+ + C+ VRT+ GH+ L + R++ SGS D I DI S
Sbjct: 229 YISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAWNSRILSSGSRDRNILQHDIRVQS 288
Score = 33.1 bits (72), Expect = 0.27
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC- 173
V +L GH V L++ D+R + SG +D+ + VW+ + + L H AV + +
Sbjct: 291 VSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSP 350
Query: 174 --NGMMVT--CSKDRSIXVWDMTSTTEIMLXECWWDTGPLSMSLTLTRNI 311
+ ++ + + DR I W+ T+ ++ DTG +L ++N+
Sbjct: 351 HQSSLLASGGGTADRCIRFWNTTNGNQLNSI----DTGSQVCNLAWSKNV 396
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGA-MLNTLIHHCEAVLHLRFCNG 179
VR + GH L ++ R + SGS D + D+ + ++ L+ H V L++ +
Sbjct: 250 VRTMGGHQTRTGVLAWNSRILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHD 309
Query: 180 --MMVTCSKDRSIXVWDMTSTTEIM 248
+ + D + VW+ S I+
Sbjct: 310 DRELASGGNDNQLLVWNNHSQQPIL 334
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 338 IKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVSGSSDNTIRLXDIEC 481
+++W+ S C+ RT+ GH+ + L + ++ SGS D +I DI C
Sbjct: 276 VQIWDASRCKRTRTMEGHRLRVGALAWGSSVLSSGSRDKSILQRDIRC 323
Score = 34.7 bits (76), Expect = 0.089
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQ--YDERAIISGSSDSTVRVWDV-STGAMLNTLIHHC--EAVLHLR 167
V +L GH V L+ YD R + SG +D+ + VW+ ST +L H +A+
Sbjct: 328 VSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSP 387
Query: 168 FCNGMMVT--CSKDRSIXVWDMTSTTEI 245
+G++ + + DR I W+ T+ T +
Sbjct: 388 HVHGLLASGGGTADRCIRFWNTTTNTHL 415
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +3
Query: 6 RELQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGA-MLNTLIHHCEAVLHLR--FCN 176
R ++GH V L + + SGS D ++ D+ ++ L H V L+ + N
Sbjct: 288 RTMEGHRLRVGALAWGSSVLSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDN 347
Query: 177 GMMVTCSKDRSIXVWDMTSTTEIM 248
+ + D + VW+ ST ++
Sbjct: 348 RELASGGNDNRLFVWNQHSTQPVL 371
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSS-CEFVRTLNGHKXGIACLQY---RDRLVVSGSSDNTIRLXDIE 478
+ ++S D+TIK+W+ S F+RT++GH + + + + L+ S S+N IR DI
Sbjct: 565 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN 624
Query: 479 CXSCIXVLEG 508
SC+ ++G
Sbjct: 625 A-SCVRAVKG 633
Score = 36.3 bits (80), Expect = 0.029
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +3
Query: 33 VLC--LQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF--CNGMMVTCSK 200
V+C YD + + S D V +W++ T + +T H + +RF + + T S
Sbjct: 511 VICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSF 570
Query: 201 DRSIXVWD 224
D++I +WD
Sbjct: 571 DKTIKIWD 578
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSS-CEFVRTLNGHKXGIACLQY---RDRLVVSGSSDNTIRLXDIE 478
+ ++S D+TIK+W+ S F+RT++GH + + + + L+ S S+N IR DI
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN 626
Query: 479 CXSCIXVLEG 508
SC+ ++G
Sbjct: 627 A-SCVRAVKG 635
Score = 36.3 bits (80), Expect = 0.029
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +3
Query: 33 VLC--LQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF--CNGMMVTCSK 200
V+C YD + + S D V +W++ T + +T H + +RF + + T S
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSF 572
Query: 201 DRSIXVWD 224
D++I +WD
Sbjct: 573 DKTIKIWD 580
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSS-CEFVRTLNGHKXGIACLQY---RDRLVVSGSSDNTIRLXDIE 478
+ ++S D+TIK+W+ S F+RT++GH + + + + L+ S S+N IR DI
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN 626
Query: 479 CXSCIXVLEG 508
SC+ ++G
Sbjct: 627 A-SCVRAVKG 635
Score = 36.3 bits (80), Expect = 0.029
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +3
Query: 33 VLC--LQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF--CNGMMVTCSK 200
V+C YD + + S D V +W++ T + +T H + +RF + + T S
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSF 572
Query: 201 DRSIXVWD 224
D++I +WD
Sbjct: 573 DKTIKIWD 580
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSS-CEFVRTLNGHKXGIACLQY---RDRLVVSGSSDNTIRLXDIE 478
+ ++S D+TIK+W+ S F+RT++GH + + + + L+ S S+N IR DI
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN 626
Query: 479 CXSCIXVLEG 508
SC+ ++G
Sbjct: 627 A-SCVRAVKG 635
Score = 36.3 bits (80), Expect = 0.029
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +3
Query: 33 VLC--LQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF--CNGMMVTCSK 200
V+C YD + + S D V +W++ T + +T H + +RF + + T S
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSF 572
Query: 201 DRSIXVWD 224
D++I +WD
Sbjct: 573 DKTIKIWD 580
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSS-CEFVRTLNGHKXGIACLQY---RDRLVVSGSSDNTIRLXDIE 478
+ ++S D+TIK+W+ S F+RT++GH + + + + L+ S S+N IR DI
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN 626
Query: 479 CXSCIXVLEG 508
SC+ ++G
Sbjct: 627 A-SCVRAVKG 635
Score = 36.3 bits (80), Expect = 0.029
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +3
Query: 33 VLC--LQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF--CNGMMVTCSK 200
V+C YD + + S D V +W++ T + +T H + +RF + + T S
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSF 572
Query: 201 DRSIXVWD 224
D++I +WD
Sbjct: 573 DKTIKIWD 580
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +2
Query: 266 GHRAAVNVVDFDEK-YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR---DRLV 433
GH + + + EK +++S+S D T+++W S + + HK + C+ + D
Sbjct: 361 GHTGEILDLSWSEKGFLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYF 420
Query: 434 VSGSSDNTIRLXDI 475
+SGS D +R+ D+
Sbjct: 421 ISGSIDGKVRIWDV 434
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 9 ELQGHTGSVLCLQYDERA-IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF---CN 176
E +GHTG +L L + E+ ++S S D TVR+W V + + H V + F +
Sbjct: 358 EFRGHTGEILDLSWSEKGFLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDD 417
Query: 177 GMMVTCSKDRSIXVWDMT 230
++ S D + +WD++
Sbjct: 418 NYFISGSIDGKVRIWDVS 435
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDV 107
+E H GS++ +++ D + + S D VRVW++
Sbjct: 251 QEFSAHDGSIVVMKFSHDGKYLASAGEDCVVRVWNI 286
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERAII-SGSSDSTVRVWDVSTGAMLNTLIHH---CEAVLHLRFCNG 179
+ G T L ++ R I+ SGS D V+VWDV+TG T+ HH AV +
Sbjct: 212 IAGQTLFFLTFNWENRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPE 271
Query: 180 MMVTCSKDRSIXVWD 224
++++ S+DR++ + D
Sbjct: 272 VLLSGSRDRTVVLKD 286
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSSCEFVRTLNGHK---XGIACLQYRDRLVVSGSSDNTIRLXD 472
+ S S D+ +KVW+ ++ + T+ H+ +A Y +++SGS D T+ L D
Sbjct: 230 VASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKD 286
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +3
Query: 21 HTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNGMMVTCSK 200
H S+ CL I SGS D T++VW +S L ++ H +A+ L +G + + S
Sbjct: 173 HADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLVAGDGRVYSASA 232
Query: 201 DRSIXVWDMTSTTEI 245
D + +W +I
Sbjct: 233 DGKVKIWGKEKRKQI 247
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +2
Query: 263 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVSG 442
+ H +++ + I S S D+T+KVW S + + ++ H I L D V S
Sbjct: 171 IEHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLVAGDGRVYSA 230
Query: 443 SSDNTIRL 466
S+D +++
Sbjct: 231 SADGKVKI 238
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 9 ELQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAML 125
E +GH +VLC+ + SGS+D ++ +W ML
Sbjct: 313 ETRGHNMAVLCMCVVGEMVCSGSADKSIGLWRREVTGML 351
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 266 GHRAAVNVVDFDEKYIVSASGDRTIKVWNTS----SCEFVRTLNGHKXGIACLQYRDRLV 433
GH AV + + + S S D++I +W C+F ++GH+ + CLQ V
Sbjct: 316 GHNMAVLCMCVVGEMVCSGSADKSIGLWRREVTGMLCKF-GVIHGHEGPVKCLQASPNNV 374
Query: 434 VSG 442
+G
Sbjct: 375 GAG 377
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY---DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC 173
+R L+ H+ ++Y D+ ++SG D V+ WDV+ +++ L+ H + V C
Sbjct: 128 LRTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYV-RCGDC 186
Query: 174 ----NGMMVTCSKDRSIXVWDMTSTTEIMLXE 257
+ M+VT S D ++ VWD T + E
Sbjct: 187 SPVNDSMLVTGSYDHTVKVWDARVHTSNWIAE 218
Score = 41.5 bits (93), Expect = 8e-04
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Frame = +2
Query: 248 AXGVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIA---C 409
A L H A V + D+ ++VS D +K W+ + + L GHK + C
Sbjct: 127 ALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDC 186
Query: 410 LQYRDRLVVSGSSDNTIRLXD 472
D ++V+GS D+T+++ D
Sbjct: 187 SPVNDSMLVTGSYDHTVKVWD 207
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Frame = +2
Query: 266 GHRAAVNVV-----DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY---R 421
GHR + V+ D +I S S D + +WN + + + L+GH + C+ +
Sbjct: 438 GHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKN 497
Query: 422 DRLVVSGSSDNTIRL 466
R++ S S D TIR+
Sbjct: 498 PRMLASASDDQTIRI 512
Score = 31.9 bits (69), Expect = 0.63
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDE--KYIVSASGDRTIKVW---NTSSCEFVRTLNGHKXGIACLQYR 421
+LV H+ V V F KY+ +AS D T +W + + E TL H+ ++ + +
Sbjct: 219 ILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWS 278
Query: 422 --DRLVVSGSSDNTIRLXDIE 478
D +++ + ++L D++
Sbjct: 279 PDDTKLLTCGNAEVLKLWDVD 299
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEK---YIVSASGDRTIKVW 349
VL GH VN V ++ K + SAS D+TI++W
Sbjct: 480 VLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 51 DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF---CNGMMVTCSKDRSIXVW 221
D I SGS DS V +W++ L L H V + + M+ + S D++I +W
Sbjct: 454 DSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC-N 176
R LQGHTG V L + + I+S S D + VW+ T + + C V+ F N
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 177 GMMVTC-SKDRSIXVWDMTSTTE 242
G V C D ++ ++ST +
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTAD 141
Score = 37.5 bits (83), Expect = 0.013
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY---DERAIISGSSDSTVRVWDVSTG 116
R L GH G V C QY ++ +I+ S D T +WDV+TG
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Frame = +2
Query: 257 VLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTL-----NGHKXGIACL 412
+L GHR V+ + ++ +++++SGD+T +W+ ++ +GH + +
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 210
Query: 413 QY---RDRLVVSGSSDNTIRLXDIECXS 487
+SGS D+T RL D S
Sbjct: 211 SISGSNPNWFISGSCDSTARLWDTRAAS 238
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +3
Query: 18 GHTGSVLCLQY---DERAIISGSSDSTVRVWDVSTGAMLNTLIH 140
GHT VL + + ISGS DST R+WD + H
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFH 245
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC-N 176
R LQGHTG V L + + I+S S D + VW+ T + + C V+ F N
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 177 GMMVTC-SKDRSIXVWDMTSTTE 242
G V C D ++ ++ST +
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTAD 141
Score = 37.5 bits (83), Expect = 0.013
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY---DERAIISGSSDSTVRVWDVSTG 116
R L GH G V C QY ++ +I+ S D T +WDV+TG
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Frame = +2
Query: 257 VLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTL-----NGHKXGIACL 412
+L GHR V+ + ++ +++++SGD+T +W+ ++ +GH + +
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 210
Query: 413 QY---RDRLVVSGSSDNTIRLXDIECXS 487
+SGS D+T RL D S
Sbjct: 211 SISGSNPNWFISGSCDSTARLWDTRAAS 238
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +3
Query: 18 GHTGSVLCLQY---DERAIISGSSDSTVRVWDVSTGAMLNTLIH 140
GHT VL + + ISGS DST R+WD + H
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFH 245
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY--DERAIISGSSDSTVRVW------DVSTGAMLNTLIHH----- 143
+++ GH SV CL + D+ ++SGS D ++RVW D NTL H
Sbjct: 113 LKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEH 172
Query: 144 ----CEAVLHLRFCNGMMVTCSKDRSIXVWDMT 230
+ V+ CN ++++ S+DR+ VW ++
Sbjct: 173 TMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLS 205
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 308 YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DRLVVSGSSDNTIRLXDI 475
Y+V I +W ++ + ++ +GH + CL + D L+VSGS D +IR+ +
Sbjct: 92 YLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
Score = 34.7 bits (76), Expect = 0.089
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 63 IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC--NGMMVTCSKDRSIXVWDM 227
++ G + +W+V+TG +L H +V L F + ++V+ S+D SI VW +
Sbjct: 93 LVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 30 SVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIH 140
++ CL Y D +ISGS D V VWD + + TLIH
Sbjct: 265 AITCLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTLIH 303
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +3
Query: 21 HTGSVLCLQYD----ERAIISGSSDSTVRVWDVSTGAMLNTLI 137
HT SV + D IIS S D T +VW +S G +L +I
Sbjct: 172 HTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNII 214
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY-DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHL-RFCN 176
++ L GHT +V L + +S S D ++R+W +S G +L ++ H V + +
Sbjct: 183 LQTLSGHTDTVRGLAVMPDLGFLSASHDGSIRLWALS-GEVLLEMVGHTSLVYSVDAHSS 241
Query: 177 GMMVTCSKDRSIXVW-DMTSTTEIMLXECWWD 269
G++V+ S+DR +W D + C WD
Sbjct: 242 GLIVSASEDRHAKIWKDGVCVQSLEHPGCIWD 273
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +2
Query: 182 DGHLQQGSFXXXXXXXXXXXXNAXGVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSS 361
+G L GS L GH+ V V D + IVS+S D+T+K W
Sbjct: 83 EGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDIVSSSVDQTLKRWRNG- 141
Query: 362 CEFVRTLNGHKXGI-ACLQYRDRLVVSGSSDNTIRL 466
+ V + + H+ I A ++ +VSGSSD +++L
Sbjct: 142 -QLVESWDAHQSPIQAVIRLPSGELVSGSSDASLKL 176
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +2
Query: 293 DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVSGSSDNTIR 463
++ E +VS S D + VWN + E ++TL GH+ + + + +VS S D T++
Sbjct: 80 EYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDIVSSSVDQTLK 136
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 45 QYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNGMMVTCSKDRSIXVW 221
+Y E ++SGS D+ V VW++ G + TL H V + N +V+ S D+++ W
Sbjct: 80 EYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDIVSSSVDQTLKRW 138
Score = 32.7 bits (71), Expect = 0.36
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 63 IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNGM-MVTCSKDRSIXVWDMTSTT 239
++SGSSD+++++W T L TL H + V L + ++ S D SI +W ++
Sbjct: 165 LVSGSSDASLKLWKGKTS--LQTLSGHTDTVRGLAVMPDLGFLSASHDGSIRLWALSG-- 220
Query: 240 EIML 251
E++L
Sbjct: 221 EVLL 224
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEK-YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR-LV 433
+VGH + V VD IVSAS DR K+W C V++L H I ++ + +
Sbjct: 226 MVGHTSLVYSVDAHSSGLIVSASEDRHAKIWKDGVC--VQSLE-HPGCIWDAKFLETGDI 282
Query: 434 VSGSSDNTIRLXDI 475
V+ SD +R+ +
Sbjct: 283 VTACSDGVVRVWTV 296
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 9 ELQGHTGSV--LCLQYDERAIISGSSDSTVRVWDV 107
EL GH V +C+ DE I + S D T+RVW +
Sbjct: 15 ELHGHDDDVRGICVCNDEN-IATSSRDRTIRVWSL 48
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY-DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHL-RFCN 176
++ L GHT +V L + +S S D ++R+W +S G +L ++ H V + +
Sbjct: 183 LQTLSGHTDTVRGLAVMPDLGFLSASHDGSIRLWALS-GEVLLEMVGHTSLVYSVDAHSS 241
Query: 177 GMMVTCSKDRSIXVW-DMTSTTEIMLXECWWD 269
G++V+ S+DR +W D + C WD
Sbjct: 242 GLIVSASEDRHAKIWKDGVCVQSLEHPGCIWD 273
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +2
Query: 182 DGHLQQGSFXXXXXXXXXXXXNAXGVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSS 361
+G L GS L GH+ V V D + IVS+S D+T+K W
Sbjct: 83 EGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDIVSSSVDQTLKRWRNG- 141
Query: 362 CEFVRTLNGHKXGI-ACLQYRDRLVVSGSSDNTIRL 466
+ V + + H+ I A ++ +VSGSSD +++L
Sbjct: 142 -QLVESWDAHQSPIQAVIRLPSGELVSGSSDASLKL 176
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +2
Query: 293 DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVSGSSDNTIR 463
++ E +VS S D + VWN + E ++TL GH+ + + + +VS S D T++
Sbjct: 80 EYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDIVSSSVDQTLK 136
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 45 QYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNGMMVTCSKDRSIXVW 221
+Y E ++SGS D+ V VW++ G + TL H V + N +V+ S D+++ W
Sbjct: 80 EYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDIVSSSVDQTLKRW 138
Score = 32.7 bits (71), Expect = 0.36
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 63 IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNGM-MVTCSKDRSIXVWDMTSTT 239
++SGSSD+++++W T L TL H + V L + ++ S D SI +W ++
Sbjct: 165 LVSGSSDASLKLWKGKTS--LQTLSGHTDTVRGLAVMPDLGFLSASHDGSIRLWALSG-- 220
Query: 240 EIML 251
E++L
Sbjct: 221 EVLL 224
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEK-YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR-LV 433
+VGH + V VD IVSAS DR K+W C V++L H I ++ + +
Sbjct: 226 MVGHTSLVYSVDAHSSGLIVSASEDRHAKIWKDGVC--VQSLE-HPGCIWDAKFLETGDI 282
Query: 434 VSGSSDNTIRLXDI 475
V+ SD +R+ +
Sbjct: 283 VTACSDGVVRVWTV 296
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 9 ELQGHTGSV--LCLQYDERAIISGSSDSTVRVWDV 107
EL GH V +C+ DE I + S D T+RVW +
Sbjct: 15 ELHGHDDDVRGICVCNDEN-IATSSRDRTIRVWSL 48
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = +3
Query: 57 RAIISGSSDSTVRVWDVSTGAML---NTLIHHCEAVLHL--RFCNGMMVTCSKDRSIXVW 221
+ I+SG D+ +R+WD TG +L + + H EA+ L + +T S D++ +W
Sbjct: 188 QTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLW 247
Query: 222 DMTSTTEIMLXECWWDTGPLSMSLTLTRNIL 314
DM + T I ++MS L +L
Sbjct: 248 DMRTLTLIKTYTTVVPVNAVAMSPLLNHVVL 278
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY-RD- 424
++ GH + + ++ + S + D T VW + E + T GH + C RD
Sbjct: 32 LMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDS 91
Query: 425 RLVVSGSSDNTIRLXDIE 478
+++GS+D T +L D++
Sbjct: 92 SRLITGSADQTAKLWDVK 109
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 305 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI-AC-LQYRDRLVVSGSSDNTIRL 466
KY+ +AS D+T+K+WN + + L GH+ + C +V+ SSD T RL
Sbjct: 230 KYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARL 285
Score = 35.9 bits (79), Expect = 0.038
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = +3
Query: 3 VRELQGHTGSVL-CL-QYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC- 173
+ +LQ H +L CL + + + SSD TV++W++ + L H V F
Sbjct: 210 LHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSM 269
Query: 174 -NGMMVTCSKDRSIXVWDMTSTTEIMLXE 257
+VT S D + +W M + E M+ +
Sbjct: 270 DGEYLVTASSDTTARLWSMRAGKEEMVYQ 298
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 257 VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH-KXGIACLQYRD 424
VL GH V DF D +Y+V+AS D T ++W+ + + H K + C RD
Sbjct: 254 VLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVCCTLLRD 312
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 3 VRELQGHTGSVLCL--QYDERAIISGSSDSTVRVWDV 107
VR HT +V+ + QY + SGS D +V++WD+
Sbjct: 77 VRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDL 113
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 63 IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC-NGMMVTC-SKDRSIXVWDM 227
+ S S DSTV++WD G ML + H E V L F NG + S D+SI +W +
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSI 570
Score = 37.5 bits (83), Expect = 0.013
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN 176
VR L+GHT V + A + SGS D+T R+W + G+ L L+
Sbjct: 258 VRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAK 317
Query: 177 GMMVTCSKDRSIXVWDMTST 236
G SKD + W+ T
Sbjct: 318 GKSNEKSKDVTTLDWNGEGT 337
Score = 36.7 bits (81), Expect = 0.022
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 18 GHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF 170
GH G V C+++D + S S DST ++W++ ++ L H + + +R+
Sbjct: 446 GHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRW 498
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--RDRLVVSGSSDNTIRLXDIE 478
+ SAS D T+K+W+ + + + NGH+ + L + + SGS D +I + I+
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIK 571
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 266 GHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI--ACLQYRDRLV 433
GHR V + F +YI S S D++I +W+ + V+T G+ GI C +
Sbjct: 539 GHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGN-GGIFEVCWNKEGNKI 597
Query: 434 VSGSSDNTIRLXD 472
+ +DN++ + D
Sbjct: 598 AACFADNSVCVLD 610
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +2
Query: 308 YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVSGSSDNTIRLXDI 475
++ + T+++W+ C+ +RT+ GH+ + L + ++ SGS D +I DI
Sbjct: 223 HLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWSSSVLSSGSRDKSILQRDI 278
Score = 31.5 bits (68), Expect = 0.83
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGA-MLNTLIHHCEAVLHLRFC-- 173
+R ++GH V L + + SGS D ++ D+ T ++ L H + L++
Sbjct: 244 IRTMEGHRLRVGALAWSSSVLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSD 303
Query: 174 NGMMVTCSKDRSIXVWDMTSTTEIM 248
N + + D + VW+ ST ++
Sbjct: 304 NRELASGGNDNKLFVWNQHSTQPVL 328
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 72 GSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNGMMVTCSKDRSIXVWDM 227
G+S TV++WDV + T+ H V L + + ++ + S+D+SI D+
Sbjct: 227 GTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWSSSVLSSGSRDKSILQRDI 278
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACL---QYRDRLVVSGSSDNTIRLXDIEC 481
+++ASGD+TIKVW+ + L GH + + L+VSGS D L D+ C
Sbjct: 143 LLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDLRC 202
Query: 482 XS 487
S
Sbjct: 203 KS 204
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +2
Query: 305 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR---DRLVVSGSSDNTIRLXDI 475
++++S+S D+T+++WN SS ++ + H + C+Q+ DR +SGS D +R+ I
Sbjct: 525 QHLLSSSMDKTVRLWNLSSQTCLKVFS-HSDYVTCIQFNPVDDRYFISGSLDAKVRVWSI 583
Score = 35.9 bits (79), Expect = 0.038
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 15 QGHTGSVLCLQYDE-RAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF---CNGM 182
QGH VL L + + + ++S S D TVR+W++S+ L + H + V ++F +
Sbjct: 510 QGHVDDVLDLAWSKSQHLLSSSMDKTVRLWNLSSQTCLK-VFSHSDYVTCIQFNPVDDRY 568
Query: 183 MVTCSKDRSIXVWDM 227
++ S D + VW +
Sbjct: 569 FISGSLDAKVRVWSI 583
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +3
Query: 45 QYDERAIISGSSDSTVRVWDV-STGAMLNTLIHHCEAVLHLRFC---NGMMVTCSKDRSI 212
+YD+ + + S D TV+VWDV S L L H AV ++F ++ +CS D S+
Sbjct: 202 KYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSV 261
Query: 213 XVWD 224
+WD
Sbjct: 262 CLWD 265
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +2
Query: 296 FDEKYIVSASGDRTIKVWNTSSCEF-VRTLNGHKXGIACLQY---RDRLVVSGSSDNTIR 463
+D+ + ++S D+T+KVW+ S + LNGH + +++ R L+ S S D ++
Sbjct: 203 YDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVC 262
Query: 464 LXD 472
L D
Sbjct: 263 LWD 265
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 317 SASGDRTIKVWNTSSCEFVRTLNGHKXGI-AC--LQYRDRLVVSGSSDNTIRLXDI 475
SASGD T+++W+ + H I +C +Y D ++ + S D T+++ D+
Sbjct: 167 SASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDV 222
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 40.3 bits (90), Expect = 0.002
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Frame = +2
Query: 257 VLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSS---CEFVRTLNGHKXGIACLQY 418
+L H + +N + + + S D +I VW V L GH + CL
Sbjct: 254 ILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAV 313
Query: 419 RDRLVVSGSSDNTIRLXDIEC--XSCIXVLEG--GPV 517
++ SGS+D T+RL SC+ +LEG GPV
Sbjct: 314 VSDILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPV 350
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERAIISGSSDSTVRVWDVS 110
L+GHT SVLCL + SGS+D TVR+W S
Sbjct: 301 LRGHTESVLCLAVVSDILCSGSADKTVRLWKCS 333
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 254 GVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEF--VRTLNGHKXGIACL 412
G+L GH +V + + S S D+T+++W S+ ++ + L GH + CL
Sbjct: 299 GMLRGHTESVLCLAVVSDILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCL 353
Score = 31.5 bits (68), Expect = 0.83
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKXGIACLQYRDR-LVVSGSSDNTIRL 466
D + S S DRT+K+W T+ + + + N H I + + + +GSSD I++
Sbjct: 176 DGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIYTGSSDQRIKV 233
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +3
Query: 9 ELQGHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAML 125
E +GHTG+V + D I SGS+D +VR+W+V TG L
Sbjct: 418 EYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCL 458
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +3
Query: 63 IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF-CNG-MMVTCSKDRSIXVWDMTST 236
++SG D V++WD +G L +L H VL +++ NG ++T SKD+ I ++D+ +
Sbjct: 283 LVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTM 342
Query: 237 TEI 245
E+
Sbjct: 343 KEL 345
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = +3
Query: 12 LQGHTGSVLCL--QYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNG-- 179
LQ H + + ++E ++SG T++ W + + H E++ L FC
Sbjct: 161 LQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDL 220
Query: 180 MMVTCSKDRSIXVWDMTSTTE 242
+CS D ++ VWD T +
Sbjct: 221 KFCSCSDDTTVKVWDFTKCVD 241
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +2
Query: 266 GHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRD--RLV 433
GH V VD+ + +VS D+ +K+W+T S + +L+GHK + +++ +
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 434 VSGSSDNTIRLXDI 475
++ S D I+L DI
Sbjct: 326 LTASKDQIIKLYDI 339
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY--RDRLVVSGSSDNTIRLXD 472
+E Y+VS T+K W + HK I L + D S S D T+++ D
Sbjct: 176 NENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWD 235
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +2
Query: 245 NAXGVLVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVRTLNGHKXGI-ACLQ 415
N V H AV+ + D + + S+S D TIKVW + + + +++ H I + +
Sbjct: 226 NRNSVKTKHNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMS 285
Query: 416 YRDRLVVSGSSDNTIRL 466
D LV +GS+D T+++
Sbjct: 286 GFDDLVFTGSADGTVKV 302
Score = 37.5 bits (83), Expect = 0.013
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSSCEFVR-TLNGHKXGIACLQYRDRLVVSGSSDNTI----RLXDI 475
+ S D + W S F L GHK + CL L++SGS+D I R
Sbjct: 339 VYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGIAGNLLLSGSADKNICVWRRDPSD 398
Query: 476 ECXSCIXVLEG--GPVPNFAL 532
+ C+ VL G GPV A+
Sbjct: 399 KSHQCLSVLTGHMGPVKCLAV 419
Score = 35.1 bits (77), Expect = 0.067
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 15 QGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIH-HCEAVLHLRFCNGMMVT 191
Q + + L ++ + GSSD V W+ S + ++ H AVL L ++++
Sbjct: 323 QENAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGIAGNLLLS 382
Query: 192 CSKDRSIXVW 221
S D++I VW
Sbjct: 383 GSADKNICVW 392
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +2
Query: 254 GVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW----NTSSCEFVRTLNGHKXGIACL 412
G+L GH++AV + ++S S D+ I VW + S + + L GH + CL
Sbjct: 361 GILKGHKSAVLCLGIAGNLLLSGSADKNICVWRRDPSDKSHQCLSVLTGHMGPVKCL 417
Score = 33.1 bits (72), Expect = 0.27
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERAIISGSSDSTVRVW 101
L+GH +VLCL ++SGS+D + VW
Sbjct: 363 LKGHKSAVLCLGIAGNLLLSGSADKNICVW 392
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 30 SVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLH-LRFCNGMMVTCSKDR 206
S L L + + S S D+T++VW ++ L ++ H +A+ + + ++ T S D
Sbjct: 239 SSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDDLVFTGSADG 298
Query: 207 SIXVW 221
++ VW
Sbjct: 299 TVKVW 303
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDE-RAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC-- 173
V L+GH ++L L + + + ++S S D TVR+WD+ T L L H + V ++F
Sbjct: 499 VCSLKGHLDAILDLSWSKSQLLLSSSMDKTVRLWDIETKTCLK-LFAHNDYVTCIQFSPV 557
Query: 174 -NGMMVTCSKDRSIXVWDM 227
++ S D I +W +
Sbjct: 558 DENYFLSGSLDAKIRIWSI 576
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 371 VRTLNGHKXGIACLQY-RDRLVVSGSSDNTIRLXDIECXSCI 493
V +L GH I L + + +L++S S D T+RL DIE +C+
Sbjct: 499 VCSLKGHLDAILDLSWSKSQLLLSSSMDKTVRLWDIETKTCL 540
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +2
Query: 269 HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG 388
H AV + F D Y+ S DR I VW CE + G
Sbjct: 403 HEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEG 444
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +2
Query: 263 VGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVRTLNGHKXGI-ACLQYRDRLV 433
+ H AV+ + +++ + SAS DRTIKVW + + + ++ H + + + + +V
Sbjct: 203 IKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEAIV 262
Query: 434 VSGSSDNTIR 463
SGS+D T++
Sbjct: 263 FSGSADGTVK 272
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +2
Query: 323 SGDRTIKVWNTSS-CEFVRTLNGHKXGIACLQYRDRLVVSGSSDNTIRL--XDIECXSCI 493
S D + W + L GHK + CL+ LV SGS+D TI + D +C+
Sbjct: 314 SSDGLVNFWEREKQLNYGGILKGHKLAVLCLEVAGSLVFSGSADKTICVWKRDGNIHTCL 373
Query: 494 XVLEG--GPVPNFAL 532
VL G GPV A+
Sbjct: 374 SVLTGHTGPVKCLAV 388
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Frame = +2
Query: 245 NAXGVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW----NTSSCEFVRTLNGHKXGIACL 412
N G+L GH+ AV ++ + S S D+TI VW N +C + L GH + CL
Sbjct: 329 NYGGILKGHKLAVLCLEVAGSLVFSGSADKTICVWKRDGNIHTC--LSVLTGHTGPVKCL 386
Query: 413 ---------QYRDR--LVVSGSSDNTIRLXDI 475
+ RD+ +V SGS D ++++ +
Sbjct: 387 AVEADREASERRDKKWIVYSGSLDKSVKVWGV 418
Score = 34.7 bits (76), Expect = 0.089
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERAIISGSSDSTVRVW--DVSTGAMLNTLIHH 143
L+GH +VLCL+ + SGS+D T+ VW D + L+ L H
Sbjct: 334 LKGHKLAVLCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGH 379
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +3
Query: 30 SVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIH-HCEAVLHLRFCNGMMVTCSKDR 206
+ L + + A+ GSSD V W+ ++ H AVL L ++ + S D+
Sbjct: 299 TALAVSKNGAAVYFGSSDGLVNFWEREKQLNYGGILKGHKLAVLCLEVAGSLVFSGSADK 358
Query: 207 SIXVWDMTSTTEIMLXECWWDTGPL 281
+I VW L TGP+
Sbjct: 359 TICVWKRDGNIHTCLSVLTGHTGPV 383
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 11/44 (25%)
Frame = +3
Query: 12 LQGHTGSVLCL----------QYDERAII-SGSSDSTVRVWDVS 110
L GHTG V CL + D++ I+ SGS D +V+VW VS
Sbjct: 376 LTGHTGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVWGVS 419
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 54 ERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC--NGMMVTCSKDRSIXVWD 224
+ +++G SD + WD++TG + H AV + F N VT S D+S+ VW+
Sbjct: 382 QNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 440
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 248 AXGVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 391
A ++ G+ VN D ++++S G+ W+ SC+ RTL H
Sbjct: 497 AGHIVAGYACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 543
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSS---CEFVRTLNGHKXGIACLQYR 421
+L H V + F KY+ S+S D+T +W S+ TL GH + + +
Sbjct: 269 ILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWS 328
Query: 422 --DRLVVSGSSDNTIRLXDIECXSCIXVLEGGPV 517
DR V++ ++ IR D++ C+ + E G +
Sbjct: 329 PDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGI 362
Score = 37.1 bits (82), Expect = 0.017
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +2
Query: 296 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRD---RLVVSGSSDNTIRL 466
+ + +I S S D + +W+ S+ + + L GH + C+ + ++ S S D TIR+
Sbjct: 499 YKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRI 558
Query: 467 XDIE 478
++
Sbjct: 559 WGLD 562
Score = 35.9 bits (79), Expect = 0.038
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 48 YDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN---GMMVTCSKDRSIXV 218
Y + I SGS DS V +W STG ++ L H AV + + M+ + S D +I +
Sbjct: 499 YKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRI 558
Query: 219 WDM 227
W +
Sbjct: 559 WGL 561
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +3
Query: 12 LQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLR-FCNGM 182
L GH V+ + + D+R +++ ++ +R WDV +G ++ + + + +G
Sbjct: 315 LVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQ 374
Query: 183 -MVTCSKDRSIXVWDMTSTTEIMLXECW 263
++ DRSI +WD+ + ECW
Sbjct: 375 GIIAGMTDRSICMWDLDGREK----ECW 398
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +3
Query: 9 ELQGHTGSVLCLQYD-ERAIISGSSDSTVRVWDVSTGAMLNTLIH--HCEAVLHLRFCNG 179
E +GHTG VL + + + ++S S D TVR+W V + L H + +V
Sbjct: 323 EFRGHTGEVLDISWSKDNYLLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQFNPVNEN 382
Query: 180 MMVTCSKDRSIXVWDMTSTTEI 245
++ S D + +W+++ + +
Sbjct: 383 YFMSGSIDGKVRIWNISGCSVV 404
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Frame = +2
Query: 182 DGHLQQGSFXXXXXXXXXXXXNAXGVLVGHRAAVNVVDFD---EKYIVSASGDRTIKVWN 352
D +L S + GV H + V V F+ E Y +S S D +++WN
Sbjct: 339 DNYLLSASMDKTVRLWKVGSNDCLGVFA-HNSYVTSVQFNPVNENYFMSGSIDGKVRIWN 397
Query: 353 TSSCEFV 373
S C V
Sbjct: 398 ISGCSVV 404
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDV 107
++++ H G++L +++ D + + S D VRVW V
Sbjct: 215 QDIKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKV 250
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +3
Query: 21 HTGSVLCLQYDER---AIISGSSDSTVRVWDVSTGAMLNTLIHH---CEAVLHLRFCNGM 182
HT SVL L +++ + S S+D V+VWDV+TG T+ HH +AV + +
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 323
Query: 183 MVTCSKDRSIXVWD 224
+++ S D+++ + D
Sbjct: 324 LLSGSFDQTVVMKD 337
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSSCEFVRTLNGHK---XGIACLQYRDRLVVSGSSDNTIRLXD 472
+ SAS D+ +KVW+ ++ T+ H +A Y +++SGS D T+ + D
Sbjct: 281 LASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVMKD 337
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +3
Query: 21 HTGSVLCLQYDER---AIISGSSDSTVRVWDVSTGAMLNTLIHH---CEAVLHLRFCNGM 182
HT SVL L +++ + S S+D V+VWDV+TG T+ HH +AV + +
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 183 MVTCSKDRSIXVWD 224
+++ S D+++ + D
Sbjct: 292 LLSGSFDQTVVLKD 305
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSSCEFVRTLNGHK---XGIACLQYRDRLVVSGSSDNTIRLXD 472
+ SAS D+ +KVW+ ++ T+ H +A Y +++SGS D T+ L D
Sbjct: 249 LASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKD 305
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +3
Query: 3 VRELQGHTGSV--LCLQYDERAIISGSSDSTVRVWDV 107
VRE +GHT + LC D + +IS S D ++R+WDV
Sbjct: 550 VREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDV 586
Score = 31.9 bits (69), Expect = 0.63
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Frame = +2
Query: 269 HRAAVNVVDF--DEKYIVSASGDRTIKVW----NTSSCEFVRTLNGHKXGIACLQY--RD 424
H +++ ++F +E ++SAS D ++K+W N +R +GH C+++
Sbjct: 267 HDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNG 326
Query: 425 RLVVSGSSDNTIRLXDI 475
R ++S D RL +
Sbjct: 327 RHILSAGQDRAFRLFSV 343
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +2
Query: 263 VGHRAAVNVVDFDE-KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR---DRL 430
VGH V + + + ++++S+S D+T+++W+ SS ++ + H + C+Q+ D
Sbjct: 465 VGHLDDVLDLSWSKSQHLLSSSMDKTVRLWDLSSKTCLKVFS-HSDYVTCIQFNPVDDNY 523
Query: 431 VVSGSSDNTIRLXDI 475
+SGS D +R+ I
Sbjct: 524 FISGSLDAKVRIWSI 538
Score = 36.3 bits (80), Expect = 0.029
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +3
Query: 18 GHTGSVLCLQYDE-RAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF---CNGMM 185
GH VL L + + + ++S S D TVR+WD+S+ L + H + V ++F +
Sbjct: 466 GHLDDVLDLSWSKSQHLLSSSMDKTVRLWDLSSKTCLK-VFSHSDYVTCIQFNPVDDNYF 524
Query: 186 VTCSKDRSIXVWDM 227
++ S D + +W +
Sbjct: 525 ISGSLDAKVRIWSI 538
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +2
Query: 254 GVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWN-TSSCEFVRTLNGHKXGIACLQY-- 418
G L GH VN V+F+ +VS S DR I +WN S + +GH + ++
Sbjct: 49 GKLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIP 108
Query: 419 --RDRLVVSGSSDNTIRLXDI 475
DR +++ +D +RL I
Sbjct: 109 FTDDRTIITSGADGQVRLGQI 129
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +3
Query: 9 ELQGHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGA-MLNTLIHHCEAVLHLRF 170
+L GH G V ++++ ++SGS D + +W+ +G+ L+ HCE V +F
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKF 106
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +3
Query: 21 HTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC--NGMMV 188
H VLC+ + D + SGS D +++W + TG + H + V L F ++
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLL 321
Query: 189 TCSKDRSIXVWDMTS 233
+ S D++ + + S
Sbjct: 322 STSFDQTARIHGLKS 336
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 3 VRELQGHTGSV--LCLQYDERAIISGSSDSTVRVWDVSTGAMLNT 131
++E +GHT V D II+ SSD TV+VWD T L T
Sbjct: 340 LKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQT 384
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +2
Query: 269 HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI--ACLQYRDRLVV 436
H V + F D ++S S D+T ++ S + ++ GH + A ++
Sbjct: 304 HSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRII 363
Query: 437 SGSSDNTIRLXDIECXSCIXVLEGGP 514
+ SSD T+++ D + C+ + P
Sbjct: 364 TASSDCTVKVWDSKTTDCLQTFKPPP 389
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = +2
Query: 152 GAAPALLQRDDGHLQQGSFXXXXXXXXXXXXNAXGVLVGHRAAVNVVDF--DEKYIVSAS 325
G RD L SF GH + VN F D I++AS
Sbjct: 307 GVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITAS 366
Query: 326 GDRTIKVWNTSSCEFVRT 379
D T+KVW++ + + ++T
Sbjct: 367 SDCTVKVWDSKTTDCLQT 384
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAV 155
+ L H VL LQ+ D+ +ISGS D++ +WDV+ G++ L HC V
Sbjct: 47 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYV 98
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAV 155
+ L H VL LQ+ D+ +ISGS D++ +WDV+ G++ L HC V
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYV 157
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKYIVSASG--DRTIKVWN------TSSCEFVRTLNGHKXGIACLQ 415
L H AVN + F + ASG + +W S + ++L+ H+ + LQ
Sbjct: 60 LTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQ 119
Query: 416 YR--DRLVVSGSSDNTIRLXDIECXSCIXVLE 505
+ D ++SGS DN+ + D+ S +L+
Sbjct: 120 WSPDDAYLISGSVDNSCIIWDVNKGSVHQILD 151
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAV 155
+ L H VL LQ+ D+ +ISGS D++ +WDV+ G++ L HC V
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYV 157
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKYIVSASG--DRTIKVWN------TSSCEFVRTLNGHKXGIACLQ 415
L H AVN + F + ASG + +W S + ++L+ H+ + LQ
Sbjct: 60 LTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQ 119
Query: 416 YR--DRLVVSGSSDNTIRLXDIECXSCIXVLE 505
+ D ++SGS DN+ + D+ S +L+
Sbjct: 120 WSPDDAYLISGSVDNSCIIWDVNKGSVHQILD 151
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 37.9 bits (84), Expect = 0.010
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +3
Query: 18 GHTGSVLCLQYDE-RAIISGSSDSTVRVWDVSTGAMLNTLIH--HCEAVLHLRFCNGMMV 188
GH VL L + + ++S S D TVR+WD+ T + L H + V +
Sbjct: 517 GHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQFNPLDEDYFI 576
Query: 189 TCSKDRSIXVWDMTS 233
+ S D I +W++++
Sbjct: 577 SGSLDAKIRIWNISN 591
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 377 TLNGHKXGIACLQY-RDRLVVSGSSDNTIRLXDIECXSCI 493
+ GH + L + R +L++S S D T+RL DIE SC+
Sbjct: 514 SFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCL 553
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 37.9 bits (84), Expect = 0.010
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Frame = +2
Query: 254 GVLVGH----RAAVNVV--DFDEKYIVSASGDRTIKVWNTSSCE----FVRTLNGH---K 394
GVLV H R+AVN + D + VSAS D T+KVW++ E F L H
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGS 1130
Query: 395 XGIACLQYRDRL-VVSGSSDNTIRLXDIE 478
G+ R+ VV G+SD I + I+
Sbjct: 1131 RGMCTTMLRNSTQVVVGASDGVIHMFSID 1159
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +3
Query: 3 VRELQGHTGSV--LCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN 176
V LQ H +V + D +S S DSTV+VWD + + + HL
Sbjct: 1074 VAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD--SRKLEKDISFRSRLTYHLEGSR 1131
Query: 177 GMMVT 191
GM T
Sbjct: 1132 GMCTT 1136
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 37.9 bits (84), Expect = 0.010
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +2
Query: 245 NAXGVLVGHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY 418
N VL H+ V F + + +AS DRT K+W T ++T GH +A + +
Sbjct: 289 NTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDG-TLLQTFEGHLDRLARVAF 347
Query: 419 R--DRLVVSGSSDNTIRLXDIECXSCIXVLEG 508
+ + + S D T RL DI + + + EG
Sbjct: 348 HPSGKYLGTTSYDKTWRLWDINTGAELLLQEG 379
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 75 SSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF--CNGMMVTCSKDRSIXVWDMTSTTEIM 248
S D T R+WD++TGA L H +V + F + +C D VWD+ + I+
Sbjct: 358 SYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSIL 417
Query: 249 LXE 257
+ +
Sbjct: 418 VFQ 420
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR-- 421
++ H V+ V ++ + ++ +AS D + +W+ V++L GH+ +A L
Sbjct: 460 IIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITAD 519
Query: 422 DRLVVSGSSDNTIRL 466
+ + S D TI+L
Sbjct: 520 SSCIATVSHDRTIKL 534
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +2
Query: 305 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI--ACLQYRDRLVVSGSSDNTIRLXDIE 478
KY+ + S D+T ++W+ ++ + GH + Q L S D+ R+ D+
Sbjct: 352 KYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLR 411
Query: 479 CXSCIXVLEGGPVPNFAL 532
I V +G P F++
Sbjct: 412 TGRSILVFQGHIKPVFSV 429
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS 358
L GH + V +D D I + S DRTIK+W +S
Sbjct: 504 LAGHESKVASLDITADSSCIATVSHDRTIKLWTSS 538
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Frame = +2
Query: 260 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVW-NTSSCEFV--RTLNGHKXGIACLQYR- 421
L GH V V F D +++AS D+T+++W N + TLN H + +
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 422 -DRLVVSGSSDNTIRLXDIECXSCI 493
++ VS S D T D+ SC+
Sbjct: 320 TNKYFVSASLDGTWCFYDLSSGSCL 344
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Frame = +2
Query: 260 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVW-NTSSCEFV--RTLNGHKXGIACLQYR- 421
L GH V V F D +++AS D+T+++W N + TLN H + +
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 422 -DRLVVSGSSDNTIRLXDIECXSCI 493
++ VS S D T D+ SC+
Sbjct: 320 TNKYFVSASLDGTWCFYDLSSGSCL 344
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR---LVVSGSSDNTIRLX 469
D + + S GD T+K+ + + + ++ L GH+ +++ R +V SGS D+ +RL
Sbjct: 114 DGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLW 173
Query: 470 DIECXSCI 493
+ + CI
Sbjct: 174 NAKTGECI 181
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSSCEFVRT 379
+L GHR VV F ++ + S S D +++WN + E +RT
Sbjct: 140 ILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIRT 183
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR---LVVSGSSDNTIRLX 469
D + + S GD T+K+ + + + ++ L GH+ +++ R +V SGS D+ +RL
Sbjct: 114 DGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLW 173
Query: 470 DIECXSCI 493
+ + CI
Sbjct: 174 NAKTGECI 181
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSSCEFVRT 379
+L GHR VV F ++ + S S D +++WN + E +RT
Sbjct: 140 ILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIRT 183
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 37.5 bits (83), Expect = 0.013
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY---DERAIISGSSDSTVRVWDVSTG 116
R L GH G V C QY ++ +I+ S D T +WDV+TG
Sbjct: 88 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 127
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Frame = +2
Query: 257 VLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTL-----NGHKXGIACL 412
+L GHR V+ + ++ +++++SGD+T +W+ ++ +GH + +
Sbjct: 89 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 148
Query: 413 QY---RDRLVVSGSSDNTIRLXDIECXS 487
+SGS D+T RL D S
Sbjct: 149 SISGSNPNWFISGSCDSTARLWDTRAAS 176
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +3
Query: 18 GHTGSVLCLQY---DERAIISGSSDSTVRVWDVSTGAMLNTLIH 140
GHT VL + + ISGS DST R+WD + H
Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFH 183
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 37.5 bits (83), Expect = 0.013
Identities = 13/23 (56%), Positives = 22/23 (95%)
Frame = +3
Query: 63 IISGSSDSTVRVWDVSTGAMLNT 131
++SGS DSTVR+WD+++G++L+T
Sbjct: 222 LMSGSGDSTVRLWDITSGSLLDT 244
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Frame = +2
Query: 275 AAVNVVDFDEKYIVSASGDRTIKVWNTSS------CEFVRTLNGH 391
A V+ + + Y++S SGD T+++W+ +S CE V T+ GH
Sbjct: 210 AFVSTPELTQGYLMSGSGDSTVRLWDITSGSLLDTCE-VSTVAGH 253
Score = 28.3 bits (60), Expect = 7.7
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 12/89 (13%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKV--WNTSSCEFVRTLN----GHKXGIACLQY------RDRLVVSG 442
D +YI+SA D I+V + E + GH I C + ++SG
Sbjct: 166 DGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPELTQGYLMSG 225
Query: 443 SSDNTIRLXDIECXSCIXVLEGGPVPNFA 529
S D+T+RL DI S + E V A
Sbjct: 226 SGDSTVRLWDITSGSLLDTCEVSTVAGHA 254
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 37.1 bits (82), Expect = 0.017
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +2
Query: 260 LVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFV-RTLNGHKXGIACLQYRDRL 430
L GH ++ V D IVS S DR+ ++W S E V L GH + D L
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCISDSL 290
Query: 431 VVSGSSDNTIRLXDIE 478
+V+ D T R+ ++
Sbjct: 291 IVTAGEDCTCRVWGVD 306
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 37.1 bits (82), Expect = 0.017
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +2
Query: 260 LVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFV-RTLNGHKXGIACLQYRDRL 430
L GH ++ V D IVS S DR+ ++W S E V L GH + D L
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCISDSL 290
Query: 431 VVSGSSDNTIRLXDIE 478
+V+ D T R+ ++
Sbjct: 291 IVTAGEDCTCRVWGVD 306
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +2
Query: 263 VGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR-DRLV 433
+ H AV+ + +E+ + S S D+T+KVW S + + ++ H I + D L+
Sbjct: 246 IRHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDDLL 305
Query: 434 VSGSSDNTIRL 466
+GS+D T+++
Sbjct: 306 FTGSADGTLKV 316
Score = 35.5 bits (78), Expect = 0.051
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +3
Query: 21 HTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF-CNGMMVT 191
H +V CL +E + SGS D T++VW +S L ++ H +A+ + + ++ T
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDDLLFT 307
Query: 192 CSKDRSIXVW 221
S D ++ VW
Sbjct: 308 GSADGTLKVW 317
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Frame = +2
Query: 290 VDFDEKYIVSASGDRTIKVWNTSS-CEFVRTLNGHKXGIACLQYRDRLVVSGSSDNTI-- 460
V+ + S D T+ W TL GH+ + CL LV+SG +D I
Sbjct: 346 VNITAAVVYCGSSDGTVNFWEGQKYLSHGGTLRGHRLAVLCLAAAGSLVLSGGADKNICV 405
Query: 461 -RLXDIECXSCIXVL--EGGPV 517
R SC+ VL GPV
Sbjct: 406 WRRNGDGSHSCLSVLMDHVGPV 427
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 15 QGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTG-AMLNTLIHHCEAVLHLRFCNGMMVT 191
Q + + L + + GSSD TV W+ + TL H AVL L ++++
Sbjct: 337 QENAVTALAVNITAAVVYCGSSDGTVNFWEGQKYLSHGGTLRGHRLAVLCLAAAGSLVLS 396
Query: 192 CSKDRSIXVW 221
D++I VW
Sbjct: 397 GGADKNICVW 406
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERAIISGSSDSTVRVW 101
L+GH +VLCL ++SG +D + VW
Sbjct: 377 LRGHRLAVLCLAAAGSLVLSGGADKNICVW 406
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +2
Query: 263 VGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVRTLNGHKXGI-ACLQYRDRLV 433
+ H AV+ + +E + S S D+T+KVW S + + ++ H + + D LV
Sbjct: 242 IRHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDDLV 301
Query: 434 VSGSSDNTIRL 466
+GS+D T+++
Sbjct: 302 FTGSADGTLKV 312
Score = 34.7 bits (76), Expect = 0.089
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +3
Query: 21 HTGSVLCLQYDERA--IISGSSDSTVRVWDVSTGAMLNTLIHHCEAV-LHLRFCNGMMVT 191
H +V CL +E + SGS D T++VW +S L ++ H +AV + + ++ T
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDDLVFT 303
Query: 192 CSKDRSIXVW 221
S D ++ VW
Sbjct: 304 GSADGTLKVW 313
Score = 34.7 bits (76), Expect = 0.089
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 15 QGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIH-HCEAVLHLRFCNGMMVT 191
Q + + L + + + GSSD TV W+ IH H AVL L ++++
Sbjct: 333 QENAVTALAVNLTDAVVYCGSSDGTVNFWERQKYLTHKGTIHGHRMAVLCLATAGSLLLS 392
Query: 192 CSKDRSIXVW 221
D++I VW
Sbjct: 393 GGADKNICVW 402
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 290 VDFDEKYIVSASGDRTIKVWNTSS-CEFVRTLNGHKXGIACLQYRDRLVVSGSSDNTI 460
V+ + + S D T+ W T++GH+ + CL L++SG +D I
Sbjct: 342 VNLTDAVVYCGSSDGTVNFWERQKYLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNI 399
Score = 28.7 bits (61), Expect = 5.8
Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 10/111 (9%)
Frame = +2
Query: 170 LQRDDGHLQQGSFXXXXXXXXXXXXNAXGVLVGHRAAVNVV--DFDEKYIVSASGDRTIK 343
L D G L GS+ + H AVN V FD+ + + S D T+K
Sbjct: 253 LNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDD-LVFTGSADGTLK 311
Query: 344 VWNTS------SCEFVRTLNGHKXGIACL--QYRDRLVVSGSSDNTIRLXD 472
VW V+ L + + L D +V GSSD T+ +
Sbjct: 312 VWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWE 362
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDERAIISGSSDSTVRVW 101
+ GH +VLCL ++SG +D + VW
Sbjct: 373 IHGHRMAVLCLATAGSLLLSGGADKNICVW 402
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 266 GHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DRLV 433
GH VN V + D + + + + D +KVWN S T H + L + + +
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 406
Query: 434 VSGSSDNTIRLXDIE 478
+S S D T+R D +
Sbjct: 407 LSASLDGTVRAWDFK 421
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +3
Query: 21 HTGSVLCLQY--DERAIISGSSDSTVRVWD 104
HT +V L + D +++S S D TVR WD
Sbjct: 390 HTNAVTALHFMADNHSLLSASLDGTVRAWD 419
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDE--RAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF-CNGM 182
L GH V L + + + S S D TVR+WDV H VL + F +G
Sbjct: 473 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 532
Query: 183 MVTCSK-DRSIXVWD 224
+ S D I WD
Sbjct: 533 QLASSTLDGQINFWD 547
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 266 GHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYR--DRLV 433
GH VN V + D + + + + D +KVWN S T H + L + + +
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 446
Query: 434 VSGSSDNTIRLXDIE 478
+S S D T+R D +
Sbjct: 447 LSASLDGTVRAWDFK 461
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +3
Query: 21 HTGSVLCLQY--DERAIISGSSDSTVRVWD 104
HT +V L + D +++S S D TVR WD
Sbjct: 430 HTNAVTALHFMADNHSLLSASLDGTVRAWD 459
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDE--RAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF-CNGM 182
L GH V L + + + S S D TVR+WDV H VL + F +G
Sbjct: 513 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 572
Query: 183 MVTCSK-DRSIXVWD 224
+ S D I WD
Sbjct: 573 QLASSTLDGQINFWD 587
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 36.3 bits (80), Expect = 0.029
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDE---RAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC 173
V + GH V C+ + + I S S D +R+WD+S+ + H AV L
Sbjct: 49 VGAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTAS 108
Query: 174 --NGMMVTCSKDRSIXVWDM 227
++V+C D ++ +W++
Sbjct: 109 TDGNVLVSCGTDCTVRLWNV 128
Score = 35.5 bits (78), Expect = 0.051
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = +2
Query: 254 GVLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACL--QY 418
G + GHR V+ + + Y I SAS D I++W+ SS V GH+ + L
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTAST 109
Query: 419 RDRLVVSGSSDNTIRLXDI 475
++VS +D T+RL ++
Sbjct: 110 DGNVLVSCGTDCTVRLWNV 128
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +2
Query: 368 FVRTLNGHKXGIACLQYRDRL---VVSGSSDNTIRLXDIECXSCIXVLEG 508
FV ++GH+ G++C+ + S S D IRL DI + G
Sbjct: 48 FVGAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPG 97
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 33 VLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLI 137
V C++Y D +ISGS D+ +R+W L ++
Sbjct: 325 VFCVKYSCDATYVISGSDDTNLRLWKAKASEQLGVIL 361
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 36.3 bits (80), Expect = 0.029
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +3
Query: 57 RAIISGSSDSTVRVWDVSTGAML---NTLIHHCEAVLHL--RFCNGMMVTCSKDRSIXVW 221
+ I+SG D +R+WD TG +L + + H + + L + +T S D++ +W
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 222 DMTSTTEIMLXECWWDTGPLSMSLTLTRNIL 314
DM + T + +S+S L +L
Sbjct: 221 DMRTLTLLKTYTTVVPVNAVSLSPLLNHVVL 251
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSSCEFVRTLN---GHKXGIA--CLQYRDRLVVSGSSDNTIRLXDI 475
IVS D+ I++W+ + + ++ + GHK I C D ++GS D T +L D+
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 36.3 bits (80), Expect = 0.029
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +3
Query: 57 RAIISGSSDSTVRVWDVSTGAML---NTLIHHCEAVLHL--RFCNGMMVTCSKDRSIXVW 221
+ I+SG D +R+WD TG +L + + H + + L + +T S D++ +W
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 222 DMTSTTEIMLXECWWDTGPLSMSLTLTRNIL 314
DM + T + +S+S L +L
Sbjct: 221 DMRTLTLLKTYTTVVPVNAVSLSPLLNHVVL 251
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSSCEFVRTLN---GHKXGIA--CLQYRDRLVVSGSSDNTIRLXDI 475
IVS D+ I++W+ + + ++ + GHK I C D ++GS D T +L D+
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 36.3 bits (80), Expect = 0.029
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +2
Query: 257 VLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH--KXGIACLQYRDR 427
V GH+ AV+ V F + SAS D T+++W+ VRT GH + L
Sbjct: 544 VFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSE 603
Query: 428 LVVSGSSDNTI 460
+ GS N +
Sbjct: 604 YLACGSETNEV 614
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 18 GHTGSVLCLQY-DERAIISGSSDSTVRVWDVSTGAMLNTLIHH 143
GH +V +++ + S S+DST+R+WDV + T H
Sbjct: 547 GHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGH 589
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 36.3 bits (80), Expect = 0.029
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +2
Query: 290 VDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRL--VVSGSSDNTIR 463
VD + +A+GD W+ S + T GH + + R +++GS D T R
Sbjct: 167 VDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTAR 226
Query: 464 LXDIECXSCIXVL 502
+ D + C+ V+
Sbjct: 227 IWDCKTGKCVKVI 239
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 35.9 bits (79), Expect = 0.038
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Frame = +3
Query: 57 RAIISGSSDSTVRVWDVSTGAML---NTLIHHCEAVLHL--RFCNGMMVTCSKDRSIXVW 221
+ I+SG D +R+WD TG +L + + H + + L + +T S D++ +W
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 222 DMTSTT 239
DM + T
Sbjct: 221 DMRTLT 226
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 311 IVSASGDRTIKVWNTSSCEFVRTLN---GHKXGIA--CLQYRDRLVVSGSSDNTIRLXDI 475
IVS D+ I++W+ + + ++ + GHK I C D ++GS D T +L D+
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 35.5 bits (78), Expect = 0.051
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 260 LVGHRAAVNVVDF-DEKYIVSASGDRTIKVWN 352
L GH AV+ V F D + IVSAS D ++K+WN
Sbjct: 890 LAGHEKAVSYVKFMDSETIVSASTDNSLKLWN 921
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 35.1 bits (77), Expect = 0.067
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 15 QGHTGSVLCLQYDERAIISGSSDSTVRVWDVS--TGAMLNTLIHHCEAV--LHLRFCNGM 182
Q +G+V L Y + + SG SD ++RVW+V+ +L + H V L
Sbjct: 850 QSGSGAVTALIYHKGLLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGEC 909
Query: 183 MVTCSKDRSIXVWDM 227
+++ S D++I VW +
Sbjct: 910 VLSGSADKTIRVWQI 924
Score = 35.1 bits (77), Expect = 0.067
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +2
Query: 278 AVNVVDFDEKYIVSASGDRTIKVWNTSS--CEFVRTLNGHKXGIACLQYRD--RLVVSGS 445
AV + + + + S D +I+VWN + + + HK + C + V+SGS
Sbjct: 855 AVTALIYHKGLLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGS 914
Query: 446 SDNTIRLXDI 475
+D TIR+ I
Sbjct: 915 ADKTIRVWQI 924
Score = 35.1 bits (77), Expect = 0.067
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 9 ELQGHTGSVLCLQYDE--RAIISGSSDSTVRVWDVSTGAM-LNTLIHHCEAVLHLRFCNG 179
+++ H +V C E ++SGS+D T+RVW + G + +I +++ L
Sbjct: 890 DIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGKLECAEVIKTKDSIRKLEAFGN 949
Query: 180 MMVTCSKDRSIXVWDMTSTTE 242
M+ +K + + D + ++
Sbjct: 950 MIFVITKGHKMKLLDSSRISQ 970
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 35.1 bits (77), Expect = 0.067
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +2
Query: 254 GVLVGHRAAVNVVDFDE---KYIVSASGDRTIKVWN--TSSCEFVRTLNGHKXGIACLQY 418
GV GH V V F + S D + +W+ T + + H + C+ +
Sbjct: 286 GVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDW 345
Query: 419 R---DRLVVSGSSDNTIRLXD 472
D L+++GS+DNT+RL D
Sbjct: 346 NPHDDNLILTGSADNTVRLFD 366
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYD-ERAIISGSS--DSTVRVWD 104
+ + +GH +VLC+Q+ +++ + GSS D + +WD
Sbjct: 379 IYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 415
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 34.7 bits (76), Expect = 0.089
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Frame = +3
Query: 6 RELQGHTGSVLCLQYDERA--IISGSSDSTVRVWDVS----TGAMLNTLIHHCEAVLHLR 167
RE QGH V + ++ + SGS D T R+W++ + A L H ++V L
Sbjct: 14 REYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLC 73
Query: 168 F---CNGMMVTCSKDRSIXVWDMTS 233
+ + ++ T S D+S+ +WD S
Sbjct: 74 WDPKHSDLVATASGDKSVRLWDARS 98
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSS--CEFVRTLNGHKXGIACLQYRD 424
L GH +V+ + +D K+ + +ASGD+++++W+ S C L+G I
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGT 121
Query: 425 RLVVSGSSDNTIRLXDI 475
+ V G+ D+ + + D+
Sbjct: 122 HVAV-GNRDDELTILDV 137
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 34.7 bits (76), Expect = 0.089
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 254 GVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 352
GVLVGH V +D D +Y +S D+TIK+W+
Sbjct: 312 GVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +3
Query: 51 DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN---GMMVTCSKDRSIXVW 221
D R +++GSSD ++ V+D+ + + H V + F + ++++ S D VW
Sbjct: 240 DGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVW 299
Query: 222 D 224
D
Sbjct: 300 D 300
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 34.7 bits (76), Expect = 0.089
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 51 DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN-GMMVTCSKDRSIXVWDM 227
+ R I + S+D+T +WD+ A+ LI H + V + + G+ + S D S+ V+D+
Sbjct: 147 EPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVFASVSADGSVRVFDL 206
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +3
Query: 3 VRELQGHTGSV--LCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLR 167
+R +GH V LC+ + +SGS D +VR+WD+ A C+ +LHLR
Sbjct: 107 LRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNA--------CQGILHLR 155
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR 427
D KY++S SGD T+ WN + V + ++CL++ R
Sbjct: 255 DGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPR 297
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 305 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIA--CLQYRDRLVVSGSSDNTIRLXDIE 478
+Y + ++G+ +++ + +R GHK + C+ + +SGS D ++RL D+
Sbjct: 86 RYNLESTGE-SLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLR 144
Query: 479 CXSCIXVL 502
+C +L
Sbjct: 145 VNACQGIL 152
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXG---IACLQYRDRLVVSGSSDNTIRLX 469
D + + S GD T+K+ + + ++ L GH+ + + +V SGS D +RL
Sbjct: 117 DGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLW 176
Query: 470 DIECXSCI 493
+ CI
Sbjct: 177 NTTTSECI 184
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 245 NAXGVLVGHRAAVNVVDFDEKY---IVSASGDRTIKVWNTSSCEFVRT 379
N VL GHR VV F + + S S D +++WNT++ E +R+
Sbjct: 139 NCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNTTTSECIRS 186
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +2
Query: 254 GVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWN--TSSCEFVRTLNGHKXGIACLQY 418
G+ GH+ V V F + S D + +W+ T + ++ H + C+ +
Sbjct: 275 GIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDW 334
Query: 419 R---DRLVVSGSSDNTIRLXD 472
+ L+++GS+DNT+R+ D
Sbjct: 335 NPHDNNLILTGSADNTVRVFD 355
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYD-ERAIISGSS--DSTVRVWD 104
V + +GH +VLC+Q+ +++ + GSS D + +WD
Sbjct: 368 VYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 404
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 48 YDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRF---CNGMMVTCSKDRSIXV 218
Y + S D V++WDV+TG ++ I H + + F C + + S D S+ +
Sbjct: 764 YIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKL 823
Query: 219 WDM 227
W++
Sbjct: 824 WNI 826
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 257 VLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWN 352
+L GH AV+ F D + +V+AS D T+K+W+
Sbjct: 877 ILSGHNKAVSYAKFLDNETLVTASTDNTLKLWD 909
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/33 (30%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 12 LQGHTGSVLCLQY-DERAIISGSSDSTVRVWDV 107
L GH +V ++ D +++ S+D+T+++WD+
Sbjct: 878 LSGHNKAVSYAKFLDNETLVTASTDNTLKLWDL 910
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 6 RELQGHTGSVLCLQYDE--RAIISGSSDSTVRVWDVSTGAMLNTLIHHC--EAVLHLRFC 173
+ L HT V+CL+ + I S S D TV +WD+S+ + + L + V+++
Sbjct: 3318 KSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVTVVYINDL 3377
Query: 174 NGMMVTCSKDRSIXVWDM 227
G +VT + + VW +
Sbjct: 3378 TGEIVTAA-GSVLAVWSI 3394
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKY--IVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRD 424
L H A V + + Y I S+S D T+ +W+ SS FVR L + + D
Sbjct: 3320 LCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVTVVYIND 3376
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 260 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG 388
L GH V DF + +YI S+S D+TI+VW S +R + G
Sbjct: 212 LTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYG 256
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTL 134
+++L GH+ V + + + I S S D T+RVW++S G + +
Sbjct: 209 LKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVI 254
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 3 VRELQGHTGSV--LCLQYDERAIISGSSDSTVRVWDVS 110
V +L+GH +V LC + II+ S D ++RVW+++
Sbjct: 282 VMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNIN 319
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Frame = +2
Query: 260 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS---SCEFVRTLNGHKXGIACLQYR- 421
L GH V + F D +++AS D+T+++W S + TL H + +
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHA 319
Query: 422 -DRLVVSGSSDNTIRLXDIECXSCI 493
++ VS S D+T D+ C+
Sbjct: 320 TNKYFVSASLDSTWCFYDLSSGLCL 344
Score = 31.5 bits (68), Expect = 0.83
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +3
Query: 12 LQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVSTG---AMLNTLIHHCEAV--LHLRF 170
L GH+ V +++ D +++ SSD TVR+W S +TL H V + +
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHA 319
Query: 171 CNGMMVTCSKDRSIXVWDMTS 233
N V+ S D + +D++S
Sbjct: 320 TNKYFVSASLDSTWCFYDLSS 340
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 6 RELQGHTGSVLCLQYDE--RAIISGSSDSTVRVWDVSTGAMLNTL 134
+ L HT V CL+ + I SGS D TV +WD+S+ + + L
Sbjct: 3374 KALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQL 3418
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 260 LVGHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKXGIACLQYRD 424
L H A V + + Y++ ASG D T+ +W+ SS FVR L I+ + D
Sbjct: 3376 LCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQLPDFPVPISAIYIND 3432
Score = 32.7 bits (71), Expect = 0.36
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Frame = +2
Query: 290 VDFDEKYIVSASGDRTIKVWNTSS--------CEFVRTLNGHKXGIACLQYRD--RLVVS 439
V D + +V+ + D + VW S + L H + CL+ ++ S
Sbjct: 3338 VSHDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIAS 3397
Query: 440 GSSDNTIRLXDIECXSCIXVLEGGPVPNFAL 532
GS D T+ + D+ S + L PVP A+
Sbjct: 3398 GSDDCTVIIWDLSSLSFVRQLPDFPVPISAI 3428
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 33.1 bits (72), Expect = 0.27
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 254 GVLVGHRAAVNVVDFDEKYI--VSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRD- 424
G GH+ AV D+ I SAS D T K+WN + + + + AC D
Sbjct: 50 GTFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDT 109
Query: 425 RLVVSGSSDNTIRLXDI 475
+++G + +R+ D+
Sbjct: 110 HRLLTGGMEKILRIFDL 126
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 15 QGHTGSVLCLQYDE--RAIISGSSDSTVRVWDVST 113
+GH G V C++Y + SGS D TVR+W V +
Sbjct: 262 KGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGS 296
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 32.7 bits (71), Expect = 0.36
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 72 GSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC-NG-MMVTCSKDRSIXVWDMTSTTEI 245
G S TV +W ++ A L + H V + F NG +M T K+R I +WD+ E+
Sbjct: 257 GHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEV 316
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 32.7 bits (71), Expect = 0.36
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 15 QGHTGSVL--CLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIH-HCEAVLHLRFCNGMM 185
+GH G+V CL + S S+D + ++WD TG +L++ H H +
Sbjct: 58 EGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSL 117
Query: 186 VTCSKDRSIXVWDM 227
+T ++ + V+DM
Sbjct: 118 LTGGFEKILRVFDM 131
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 15 QGHTGSVLCLQYDERAI--ISGSSDSTVRVWDVS 110
+GH G V C+++ + SGS D T+R+W +
Sbjct: 267 KGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTT 300
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI--ACLQYRDRLVVSGSSDNTIRLXD 472
D +++SAS D + N + +++ T GHK + +CL S S+D + +L D
Sbjct: 30 DGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 32.7 bits (71), Expect = 0.36
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 15 QGHTGSVL--CLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIH-HCEAVLHLRFCNGMM 185
+GH G+V CL + S S+D + ++WD TG +L++ H H +
Sbjct: 58 EGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSL 117
Query: 186 VTCSKDRSIXVWDM 227
+T ++ + V+DM
Sbjct: 118 LTGGFEKILRVFDM 131
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 15 QGHTGSVLCLQYDERAI--ISGSSDSTVRVWDVS 110
+GH G V C+++ + SGS D T+R+W +
Sbjct: 267 KGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTT 300
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI--ACLQYRDRLVVSGSSDNTIRLXD 472
D +++SAS D + N + +++ T GHK + +CL S S+D + +L D
Sbjct: 30 DGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 32.3 bits (70), Expect = 0.47
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 51 DERAIISGSSDSTVRVWDVSTGAML 125
D+R ++S DSTV++W++ +G M+
Sbjct: 229 DQRFVLSSGKDSTVKLWEIGSGRMV 253
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 394
D+++++S+ D T+K+W S V+ G K
Sbjct: 229 DQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAK 260
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 32.3 bits (70), Expect = 0.47
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 51 DERAIISGSSDSTVRVWDVSTGAML 125
D+R ++S DSTV++W++ +G M+
Sbjct: 321 DQRFVLSSGKDSTVKLWEIGSGRMV 345
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 394
D+++++S+ D T+K+W S V+ G K
Sbjct: 321 DQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAK 352
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 260 LVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 391
L GH V+ V F D +V+A D +K+W+ +RT GH
Sbjct: 109 LQGHTKTVSYVRFLDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGH 153
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKXGIACLQYRDRLVVSGSSDNTIRLXDI 475
D +++ + +++W+++S +RTL GH+ + L + + ++ +G D I D+
Sbjct: 193 DGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHILTTGGMDGLIINNDV 252
Query: 476 ECXSCI 493
S I
Sbjct: 253 RIRSPI 258
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +3
Query: 3 VRELQGHTGSVLCL-----QYDERAIISGSSDSTVRVWDVSTGAMLNTL 134
+ L+ HT +V L Q + A G D T++ W+ TGA LN++
Sbjct: 307 LHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSV 355
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKXGIACLQYRDRLVVSGSSDNTIRLXDI 475
D +++ + +++W+++S +RTL GH+ + L + + ++ +G D I D+
Sbjct: 183 DGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHILTTGGMDGLIINNDV 242
Query: 476 ECXSCI 493
S I
Sbjct: 243 RIRSPI 248
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +3
Query: 3 VRELQGHTGSVLCL-----QYDERAIISGSSDSTVRVWDVSTGAMLNTL 134
+ L+ HT +V L Q + A G D T++ W+ TGA LN++
Sbjct: 297 LHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSV 345
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +3
Query: 78 SDSTVRVWDV-STGAMLNTLIHHCEAVLHLRFC---NGMMVTCSKDRSIXVWDMTSTTEI 245
S T+++WD+ + + + H V+ + +C + ++TC+KD WD T+T EI
Sbjct: 240 SSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWD-TNTAEI 298
Query: 246 M 248
+
Sbjct: 299 V 299
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +3
Query: 78 SDSTVRVWDV-STGAMLNTLIHHCEAVLHLRFC---NGMMVTCSKDRSIXVWDMTSTTEI 245
S T+++WD+ + + + H V+ + +C + ++TC+KD WD T+T EI
Sbjct: 240 SSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWD-TNTAEI 298
Query: 246 M 248
+
Sbjct: 299 V 299
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 51 DERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCN-GMMVTCSKDRSIXVWDM 227
+ R I + S D+T +WD+ + LI H + V + + G+ + S+D S+ V+D+
Sbjct: 147 EPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGVGVFASVSEDGSVRVFDL 206
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +3
Query: 6 RELQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLR---FCN 176
+E +T S C + +G +RV DV++ + +L+ H ++V +R
Sbjct: 82 KEESFYTVSWACGVNGNPYVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKP 141
Query: 177 GMMVTCSKDRSIXVWDMTSTTEIML 251
+++T SKD S+ +W++ + I++
Sbjct: 142 QLVITASKDESVRLWNVETGICILI 166
Score = 31.9 bits (69), Expect = 0.63
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +2
Query: 308 YIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQ---YRDRLVVSGSSDNTIRLXDIE 478
Y+ + I+V + +S ++L GH + ++ + +LV++ S D ++RL ++E
Sbjct: 100 YVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVE 159
Query: 479 CXSCIXVLEG 508
CI + G
Sbjct: 160 TGICILIFAG 169
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 15 QGHTGSVL--CLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIH 140
+GH G+V CL + S S+D + ++WD TG +L++ H
Sbjct: 58 EGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEH 101
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI--ACLQYRDRLVVSGSSDNTIRLXD 472
D +++SAS D + N + +++ T GHK + +CL S S+D + +L D
Sbjct: 30 DGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 15 QGHTGSVLCLQYDE--RAIISGSSDSTVRVW 101
+GH G V C+++ + SGS D T+R+W
Sbjct: 267 KGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 260 LVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTS 358
++GH V+ V F D +VS+S D T+K+W+ S
Sbjct: 700 MIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLS 733
Score = 31.5 bits (68), Expect = 0.83
Identities = 12/35 (34%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 18 GHTGSVLCLQY-DERAIISGSSDSTVRVWDVSTGA 119
GH+ +V +++ D ++S S+D+T+++WD+S A
Sbjct: 702 GHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSA 736
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 260 LVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTS 358
++GH V+ V F D +VS+S D T+K+W+ S
Sbjct: 658 MIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLS 691
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY---DERAIISGSSDSTVRVWDVSTGAMLNTL 134
V E++ H V + Y D + SGS D +V++W ++ G + T+
Sbjct: 569 VTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI 615
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/32 (34%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +3
Query: 18 GHTGSVLCLQY-DERAIISGSSDSTVRVWDVS 110
GH +V +++ D ++S S+D+T+++WD+S
Sbjct: 660 GHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLS 691
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 260 LVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTS 358
++GH V+ V F D +VS+S D T+K+W+ S
Sbjct: 658 MIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLS 691
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY---DERAIISGSSDSTVRVWDVSTGAMLNTL 134
V E++ H V + Y D + SGS D +V++W ++ G + T+
Sbjct: 569 VTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI 615
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/32 (34%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +3
Query: 18 GHTGSVLCLQY-DERAIISGSSDSTVRVWDVS 110
GH +V +++ D ++S S+D+T+++WD+S
Sbjct: 660 GHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLS 691
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 31.9 bits (69), Expect = 0.63
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Frame = +2
Query: 299 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI---------ACLQYRDRLVVSGSSD 451
D K I S S D I+ W+ +SC V + G+ + L R ++VSG S
Sbjct: 209 DAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEICVWSLLSLRCSVLVSGDST 268
Query: 452 NTIRLXDIE 478
T++ D E
Sbjct: 269 GTVQFWDSE 277
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVST 113
R L +G L + + D + I SGSSD +R WD ++
Sbjct: 192 RSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATS 229
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 31.9 bits (69), Expect = 0.63
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 260 LVGHRAAV-NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQY---RDR 427
L GH V ++ D ++SAS D+T+++W T C+ + H + C+++
Sbjct: 268 LYGHTGDVLDLAWSDSNLLLSASKDKTVRLWRT-GCDQCLHVFHHNNYVTCVEFNPVNKN 326
Query: 428 LVVSGSSDNTIRL 466
SGS D R+
Sbjct: 327 NFASGSIDGKARI 339
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 31.5 bits (68), Expect = 0.83
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = +2
Query: 266 GHRAAVNVV---DFDEKYIVSASGDRTIKVWNTSSCEFVRTL----NGHKXGIACLQYRD 424
GH+ A++ D ++ S D +KVW+T++ + V ++ ++ +
Sbjct: 101 GHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSH 160
Query: 425 RLVVSGSSDNTIRLXDIECXSCIXVLEG 508
L+ +G+ D +RL DI + L G
Sbjct: 161 TLIAAGTDDVQVRLCDIASGAFSHTLSG 188
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Frame = +2
Query: 266 GHRAAVNVVDFD---EK--YIVSASGDRTIKVWNTSSC 364
GH +AV+ V F EK +++S D+T+K+W+ C
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCFKC 283
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Frame = +3
Query: 18 GHTGSVLCLQYD-----ERAIISGSSDSTVRVWD 104
GH +V C+ + R +ISG +D TV++WD
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Frame = +2
Query: 266 GHRAAVNVVDFD---EK--YIVSASGDRTIKVWNTSSC 364
GH +AV+ V F EK +++S D+T+K+W+ C
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCFKC 309
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Frame = +3
Query: 18 GHTGSVLCLQYD-----ERAIISGSSDSTVRVWD 104
GH +V C+ + R +ISG +D TV++WD
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 9 ELQGHTGSVLCLQYD----ERAIISGSSDSTVRVWDVSTGAMLNTLIHH 143
E+ H G V + + + +I+ D T++VWD +TG +T H
Sbjct: 457 EIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGH 505
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +2
Query: 269 HRAAVNVVDFD----EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI--ACLQYRDRL 430
H VN + F + +++ D+TIKVW+ ++ T GH+ + C Y++ +
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENI 520
Query: 431 --VVSGSSDNTIR 463
+ S + D I+
Sbjct: 521 QFIFSTALDGKIK 533
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 9 ELQGHTGSVLCLQYD----ERAIISGSSDSTVRVWDVSTGAMLNTLIHH 143
E+ H G V + + + +I+ D T++VWD +TG +T H
Sbjct: 457 EIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGH 505
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +2
Query: 269 HRAAVNVVDFD----EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGI--ACLQYRDRL 430
H VN + F + +++ D+TIKVW+ ++ T GH+ + C Y++ +
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENI 520
Query: 431 --VVSGSSDNTIR 463
+ S + D I+
Sbjct: 521 QFIFSTALDGKIK 533
>At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1
significant, 2 weak WD-40 repeats (PF00400); similar to
transducin beta-like 1 protein.(SP:O60907) [Homo
sapiens]
Length = 467
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY----DERAIISGSSDSTVRVWDVSTGAMLN 128
V+ +GH S +++ ER I+SG D R+W + +G +++
Sbjct: 379 VQTYEGHVNSHTPIEFGIDPSERFILSGGDDCYTRIWSIKSGQLMS 424
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQYDERA---IISGSSDSTVRVWDVST 113
V++L+GHT V + ++ A I S S+D TVR+W+ S+
Sbjct: 13 VQKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSS 52
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Frame = +3
Query: 18 GHTGSVLCLQY--DERAIISGSSDSTVRVWDVST--GAMLNTLIH 140
GH GS+ + + D + +++ S+D + ++WD+S LNT ++
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLN 274
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +2
Query: 245 NAXGVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNT 355
N VL GH+ V V F D++ + +AS DRT K+W T
Sbjct: 97 NKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKT 136
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFD--EKY-IVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACL 412
++ H V+ V ++ E+Y + +AS D + +W+ V++L GH+ +A L
Sbjct: 209 IIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASL 263
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +3
Query: 21 HTGSVLCLQY--DERAIISGSSDSTVRVWDVSTGAMLNTLIH 140
H G+V L+ D ++S SDS +R+WD+ +G NTL++
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGR--NTLVN 350
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Frame = +3
Query: 12 LQGHTGSVLCLQYDER--AIISGSSDSTVRVW----DVSTGAMLNTLIH----HCEAVLH 161
L GHT V +Q+ + S S D+T++VW D + TL H V
Sbjct: 159 LTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWS 218
Query: 162 LRF--CNGMMVTCSKDRSIXVW 221
+ F MVTCS D ++ +W
Sbjct: 219 ISFNAAGDKMVTCSDDLTLKIW 240
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Frame = +2
Query: 266 GHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEF-----------VRTLNG-HKXGI 403
GH + V + F+ +V+ S D T+K+W T + + TL+G H I
Sbjct: 211 GHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTI 270
Query: 404 ACLQY-RDRLVVSGSSDNTIRL 466
+ RD ++ SG+ DN IRL
Sbjct: 271 YSAHWSRDDIIASGAGDNAIRL 292
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 63 IISGSSDSTVRVWDV--STGAMLNTLIHHCEAVLHLRF--CNGMMVTCSKDRSIXVWDMT 230
+ + S D T +W S ++TL H V + + + TCS+D+S+ +W++
Sbjct: 89 LATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVL 148
Query: 231 STTE 242
E
Sbjct: 149 EGNE 152
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +3
Query: 48 YDERAIISGSSDSTVRVWDV-STGAMLNTLIHHCEAVLHLRF---CNGMMVTCSKDRSIX 215
++E + + SSDSTV ++D+ A L+ + H V + + ++ + +DR +
Sbjct: 271 FNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLM 330
Query: 216 VWDMTSTTEIML 251
VWD+ E L
Sbjct: 331 VWDLNRVGEEQL 342
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIA-CLQYRDR 427
+ H V V F D+ + +S S D +++W+ S C+ V + A C Q +
Sbjct: 392 IFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPDGQ 451
Query: 428 LVVSGSSDNTIRLXDI 475
V+ G+ + R ++
Sbjct: 452 AVIIGTLTSDCRFYNV 467
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 386 GHKXGIACLQY-RDRLVVSGSSDNTIRLXDIECXSCIXV 499
GH I + + ++ ++S S DN++RL I C C+ +
Sbjct: 354 GHSGDILDISWSKNNRLLSASVDNSVRLWQIGCEDCLGI 392
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +2
Query: 260 LVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIA-CLQYRDR 427
+ H V V F D+ + +S S D +++W+ S C+ V + A C Q +
Sbjct: 392 IFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPDGQ 451
Query: 428 LVVSGSSDNTIRLXDI 475
V+ G+ + R ++
Sbjct: 452 AVIIGTLTSDCRFYNV 467
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 386 GHKXGIACLQY-RDRLVVSGSSDNTIRLXDIECXSCIXV 499
GH I + + ++ ++S S DN++RL I C C+ +
Sbjct: 354 GHSGDILDISWSKNNRLLSASVDNSVRLWQIGCEDCLGI 392
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 266 GHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDR-LVV 436
GH V+ + F E + S S D T+ +WN ++ + GH+ + + R V+
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDALGRERVL 320
Query: 437 SGSSDNTIRLXDI 475
S D T++L +
Sbjct: 321 SVGRDRTMQLYKV 333
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +3
Query: 18 GHTGSV--LCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHL-RFCNGMMV 188
GH G V LC + + SGS D T+ +W+ + + H +L + ++
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDALGRERVL 320
Query: 189 TCSKDRSIXVW 221
+ +DR++ ++
Sbjct: 321 SVGRDRTMQLY 331
>At3g21120.1 68416.m02669 F-box family protein similar to
GP:20197985 F-box protein family, AtFBX9 (GP:20197985)
{Arabidopsis thaliana}; contains weak hit to Pfam
PF00646: F-box domain
Length = 367
Score = 29.5 bits (63), Expect = 3.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 171 CNGMMVTCSKDRSIXVWDMTS 233
C+G+++ C+KDR + VW+ S
Sbjct: 108 CDGLLLCCTKDRRLVVWNPCS 128
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
Pfam PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Frame = +3
Query: 18 GHTGSVLCLQY-----DERAIISGSSDSTVRVWDVSTGAMLNTLI 137
GH GS+ CL E ++SG SD + +W GA L+
Sbjct: 130 GHKGSIYCLMNFMASSGEALLVSGGSDGLLVLWSADHGADSRELV 174
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 248 AXGVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTS 358
A +L GH+A+V V + + S+S D TI +WNT+
Sbjct: 197 AYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTN 235
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 248 AXGVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTS 358
A +L GH+A+V V + + S+S D TI +WNT+
Sbjct: 197 AYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTN 235
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 18 GHTGSVLCLQY--DERAIISGSSDSTVRVWDV 107
GH V CL D +++GS DSTV +W +
Sbjct: 2666 GHCAPVTCLALSPDNNFLVTGSRDSTVLLWRI 2697
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 6 RELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDVS 110
R L TG L + + D + I SGSSD +R WD +
Sbjct: 192 RSLPRVTGRALSVTWSADAQRIFSGSSDGLIRCWDAN 228
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = +3
Query: 6 RELQGHTGSVLCLQYDERA--IISGSSDSTVRVWDVSTG-AMLNTLIHHCEAVLHLRFC- 173
++L+ H G V + ++ +ISGS D V +WD G L+ H V +F
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMP 112
Query: 174 ---NGMMVTCSKD 203
+ +VTC+ D
Sbjct: 113 FSDDRTIVTCAAD 125
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +2
Query: 281 VNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRDRLVVSGSS 448
VN +Y+VS S I +W E +R + + + C++ + V SS
Sbjct: 339 VNFFGPRSEYVVSGSDCGRIFIWRKKGGELIRVMEADRHVVNCIEPHPHIPVLASS 394
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +3
Query: 48 YDERAIISGSSDSTVRVWDV-STGAMLNTLIHHCEAVLHLRF---CNGMMVTCSKDRSIX 215
++E + + SSDSTV ++D+ A L+ L H V + + ++ + +DR +
Sbjct: 272 FNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLM 331
Query: 216 VWDM 227
VWD+
Sbjct: 332 VWDI 335
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 353 TSSCEFVRTLNGHKX---GIACLQYRDRLVVSGSSDNTIRLXDIECXSCIXVL 502
TS C+ L GH+ G+A +++ ++SGS D I L D+ + VL
Sbjct: 156 TSECDPDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVL 208
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 9 ELQGHTGSVLCLQYDERA--IISGSSDSTVRVWD 104
+L+GHT V L D ++SGS D TVR++D
Sbjct: 172 QLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYD 205
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 51 DERAIISGSSDSTVRVWDVSTGAMLNT 131
D I S SSD +RVWDV A NT
Sbjct: 275 DPYLIGSASSDGIIRVWDVRMAAKENT 301
>At1g17250.1 68414.m02101 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 756
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 551 IHWPSFYNVVNSEKPGRYPT*SPCSTXP 634
+H+ S++NVVN+ G PT S T P
Sbjct: 656 LHYMSYFNVVNNSLDGPIPTGSQFDTFP 683
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +2
Query: 290 VDFDEKYIVSASGDRTIKVWNTSSCEFVR--TLNGHKXGIACLQY-RDRLVVSGSSDNT- 457
VD +E ++ GD T+ +W+ SSC + T++ + + + +D L ++ DN+
Sbjct: 117 VDIEEYIVIEQLGD-TVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSE 175
Query: 458 IRLXDIECXSCIXVLEGG 511
+++ D + L GG
Sbjct: 176 VQVWDCVSNRHVRTLRGG 193
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 266 GHRAAVNVVDFDE--KYIVSAS-GDRTIKVWNTSSCE 367
GH V V F E KY++S++ G+R I VW T +
Sbjct: 196 GHPGVVRCVAFTEDGKYVLSSAVGERYIAVWKTDGAK 232
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 269 HRAAVN-VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRD---RLVV 436
H AVN +++ E I S +K+W+T N H+ I+ + + +LVV
Sbjct: 36 HEDAVNTLINVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVV 95
Query: 437 SGSSDNTIRLXDI 475
+ S D T+ + ++
Sbjct: 96 T-SGDGTLSVCNL 107
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 269 HRAAVN-VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKXGIACLQYRD---RLVV 436
H AVN +++ E I S +K+W+T N H+ I+ + + +LVV
Sbjct: 93 HEDAVNTLINVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVV 152
Query: 437 SGSSDNTIRLXDI 475
+ S D T+ + ++
Sbjct: 153 T-SGDGTLSVCNL 164
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +2
Query: 257 VLVGHRAAVNVVDFDEKYIVSASGD--RTIKVWNTSSCEF-VRTLNGHKXGIACLQY--R 421
VL HR A+ V+ + + ASGD R VW+ + + + + H I L +
Sbjct: 351 VLEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPN 410
Query: 422 DRLVVSGSSDNTIRLXDIE 478
+++V +GS D + + +++
Sbjct: 411 NKMVATGSIDTCVIVYEVD 429
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 3 VRELQGHTGSVLCLQY--DERAIISGSSDSTVRVWDV 107
V+ ++ H V C+ D + +GS D+TV VWD+
Sbjct: 1039 VQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDI 1075
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 75 SSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFC--NGMMVTCSKDRSIXVWDMTST 236
+S + + +W+V T + L H V HL F + ++++ S+DR V+ + T
Sbjct: 624 ASMAEIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRT 679
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,482,122
Number of Sequences: 28952
Number of extensions: 280618
Number of successful extensions: 1700
Number of sequences better than 10.0: 181
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1589
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2227127592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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