Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0258.Seq
(900 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GU68 Cluster: Eukaryotic translation initiation facto... 155 1e-36
UniRef50_P63241 Cluster: Eukaryotic translation initiation facto... 131 2e-29
UniRef50_UPI0001552E45 Cluster: PREDICTED: similar to initiation... 124 2e-27
UniRef50_Q20751 Cluster: Eukaryotic translation initiation facto... 121 3e-26
UniRef50_Q4WK14 Cluster: Eukaryotic translation initiation facto... 116 8e-25
UniRef50_Q86DY5 Cluster: Clone ZZZ427 mRNA sequence; n=2; Bilate... 110 4e-23
UniRef50_P80639 Cluster: Eukaryotic translation initiation facto... 110 5e-23
UniRef50_P34563 Cluster: Eukaryotic translation initiation facto... 109 9e-23
UniRef50_Q8MX76 Cluster: Eukaryotic translation initiation facto... 103 6e-21
UniRef50_Q5ZF92 Cluster: Eukaryotic translation initiation facto... 102 1e-20
UniRef50_Q8LSN0 Cluster: Translation initiation factor 5A; n=2; ... 100 6e-20
UniRef50_Q249P9 Cluster: Translation initiation factor eIF-5A fa... 92 2e-17
UniRef50_A0DV26 Cluster: Chromosome undetermined scaffold_65, wh... 87 4e-16
UniRef50_Q4QA21 Cluster: Eukaryotic initiation factor 5a, putati... 83 7e-15
UniRef50_UPI0000498A83 Cluster: translation initiation factor eI... 82 2e-14
UniRef50_Q98RY8 Cluster: Translation initiation factor eIF-5A.2;... 81 5e-14
UniRef50_Q2TWV6 Cluster: Translation initiation factor 5A; n=1; ... 75 2e-12
UniRef50_A2DEK5 Cluster: Translation initiation factor eIF-5A fa... 71 3e-11
UniRef50_Q7QR21 Cluster: GLP_576_14492_14043; n=1; Giardia lambl... 66 2e-09
UniRef50_Q9YA53 Cluster: Translation initiation factor 5A; n=3; ... 63 8e-09
UniRef50_P56635 Cluster: Translation initiation factor 5A; n=15;... 58 2e-07
UniRef50_A0ECS4 Cluster: Chromosome undetermined scaffold_9, who... 55 3e-06
UniRef50_A3BI23 Cluster: Putative uncharacterized protein; n=2; ... 54 4e-06
UniRef50_Q02217 Cluster: Putative uncharacterized protein YEL034... 54 5e-06
UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole gen... 53 9e-06
UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1; ... 53 1e-05
UniRef50_Q2U2G6 Cluster: Predicted protein; n=1; Aspergillus ory... 50 8e-05
UniRef50_O29612 Cluster: Translation initiation factor 5A; n=7; ... 50 1e-04
UniRef50_Q8U1E4 Cluster: Translation initiation factor 5A; n=7; ... 48 2e-04
UniRef50_Q01GB7 Cluster: NHL repeat; n=2; Ostreococcus|Rep: NHL ... 48 4e-04
UniRef50_A0RUN7 Cluster: Translation elongation factor P (EF-P)/... 47 6e-04
UniRef50_Q6L150 Cluster: Translation initiation factor 5A; n=4; ... 45 0.002
UniRef50_Q2FQ93 Cluster: Translation initiation factor 5A; n=4; ... 45 0.002
UniRef50_Q9HP78 Cluster: Translation initiation factor 5A; n=5; ... 45 0.003
UniRef50_Q6LYN8 Cluster: Translation initiation factor 5A; n=5; ... 44 0.004
UniRef50_Q5YEV5 Cluster: Translation initiation factor 5A; n=1; ... 44 0.007
UniRef50_P87252 Cluster: Woronin body major protein precursor; n... 44 0.007
UniRef50_Q9UW16 Cluster: Vacuolar-ATPase; n=3; Sordariomycetes|R... 40 0.11
UniRef50_Q74N24 Cluster: Translation initiation factor 5A; n=2; ... 38 0.26
UniRef50_Q5LR08 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A7EAR5 Cluster: Predicted protein; n=1; Sclerotinia scl... 35 2.5
UniRef50_Q2H8A0 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_A5ZTK9 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_A5BEH2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
>UniRef50_Q9GU68 Cluster: Eukaryotic translation initiation factor
5A; n=4; Coelomata|Rep: Eukaryotic translation
initiation factor 5A - Drosophila melanogaster (Fruit
fly)
Length = 159
Score = 155 bits (376), Expect = 1e-36
Identities = 68/85 (80%), Positives = 78/85 (91%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 434
KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR
Sbjct: 68 KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127
Query: 435 DFDSGKELLCTVLKSCGEECVIAVK 509
DFDSGK+LLCTVLK+CGEECVIA+K
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIK 152
Score = 123 bits (296), Expect = 7e-27
Identities = 57/76 (75%), Positives = 64/76 (84%)
Frame = +1
Query: 52 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 231
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 232 VGIDIFNGKSMKISVP 279
VGIDIF+ K + P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>UniRef50_P63241 Cluster: Eukaryotic translation initiation factor
5A-1; n=75; Eukaryota|Rep: Eukaryotic translation
initiation factor 5A-1 - Homo sapiens (Human)
Length = 154
Score = 131 bits (317), Expect = 2e-29
Identities = 60/72 (83%), Positives = 64/72 (88%)
Frame = +1
Query: 64 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 243
+D FETGD+GASATFPMQCSALRKNGFV+LKGRPCKIVEMSTSKTGKHGHAKVHLVGID
Sbjct: 3 DDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 62
Query: 244 IFNGKSMKISVP 279
IF GK + P
Sbjct: 63 IFTGKKYEDICP 74
Score = 116 bits (278), Expect = 1e-24
Identities = 49/85 (57%), Positives = 68/85 (80%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 434
KKYEDICPSTHNMDVP++KR D+QL I D GYL+L+ D+G++REDL++P+GDLG ++
Sbjct: 67 KKYEDICPSTHNMDVPNIKRNDFQLIGIQD-GYLSLLQDSGEVREDLRLPEGDLGKEIEQ 125
Query: 435 DFDSGKELLCTVLKSCGEECVIAVK 509
+D G+E+L TVL + EE +A+K
Sbjct: 126 KYDCGEEILITVLSAMTEEAAVAIK 150
>UniRef50_UPI0001552E45 Cluster: PREDICTED: similar to initiation
factor 4D; n=2; Mus musculus|Rep: PREDICTED: similar to
initiation factor 4D - Mus musculus
Length = 357
Score = 124 bits (300), Expect = 2e-27
Identities = 57/72 (79%), Positives = 61/72 (84%)
Frame = +1
Query: 64 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 243
+D FETGD+G SATFPMQCSALRKNGFV+LKG PCKIVEMSTSKTGKHGHAKVHLVG D
Sbjct: 3 DDLDFETGDAGPSATFPMQCSALRKNGFVVLKGGPCKIVEMSTSKTGKHGHAKVHLVGTD 62
Query: 244 IFNGKSMKISVP 279
IF GK + P
Sbjct: 63 IFTGKKYEDICP 74
Score = 103 bits (247), Expect = 6e-21
Identities = 45/89 (50%), Positives = 67/89 (75%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 434
KKYEDICPSTHNMDVP++KR ++QL I + GYL+L+ ++ ++REDL++P+GDLG ++
Sbjct: 67 KKYEDICPSTHNMDVPNIKRNNFQLVGIQN-GYLSLLQNSEEVREDLRLPEGDLGKEIEQ 125
Query: 435 DFDSGKELLCTVLKSCGEECVIAVKQTQL 521
+D G+E+L TVL + EE ++ Q L
Sbjct: 126 KYDCGEEILITVLSAMTEEAMLVSPQKLL 154
>UniRef50_Q20751 Cluster: Eukaryotic translation initiation factor
5A-2; n=66; Eukaryota|Rep: Eukaryotic translation
initiation factor 5A-2 - Caenorhabditis elegans
Length = 161
Score = 121 bits (291), Expect = 3e-26
Identities = 54/72 (75%), Positives = 60/72 (83%)
Frame = +1
Query: 64 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 243
+D HF TGDSGA+ATFP QCSALRKN VM+KGRPCKIVEMSTSKTGKHGHAKVH+V ID
Sbjct: 7 DDEHFHTGDSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAID 66
Query: 244 IFNGKSMKISVP 279
IF K ++ P
Sbjct: 67 IFTSKKLEDICP 78
Score = 83.0 bits (196), Expect = 9e-15
Identities = 42/87 (48%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLM-ADNGDLREDLKIPDGDLGTQLR 431
KK EDICPSTHNMDVP VKR +Y L I DDGY +LM ++ + ++DLK+PD +LG Q+R
Sbjct: 71 KKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLPDTELGQQIR 129
Query: 432 TDFDSGK-ELLCTVLKSCGEECVIAVK 509
++ + +L V+ + GEE ++ K
Sbjct: 130 DAYEKDEGSVLVQVVSAIGEEAILGWK 156
>UniRef50_Q4WK14 Cluster: Eukaryotic translation initiation factor
eIF-5A; n=5; Dikarya|Rep: Eukaryotic translation
initiation factor eIF-5A - Aspergillus fumigatus
(Sartorya fumigata)
Length = 192
Score = 116 bits (279), Expect = 8e-25
Identities = 50/75 (66%), Positives = 63/75 (84%)
Frame = +1
Query: 43 NTTMGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAK 222
+T + + FE+ D+GASAT+PMQCSALRKNG V++KGRPCKIV+MSTSKTGKHGHAK
Sbjct: 32 STDICSFQHETFESADAGASATYPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAK 91
Query: 223 VHLVGIDIFNGKSMK 267
VH+V +DIF GK ++
Sbjct: 92 VHIVALDIFTGKKLE 106
Score = 95.5 bits (227), Expect = 2e-18
Identities = 40/87 (45%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 434
KK ED+ PSTHNMDVP+V R +YQL D++DDG+L+LM + G+ ++D+K+P+G++G +++
Sbjct: 103 KKLEDLSPSTHNMDVPNVTRREYQLLDVTDDGFLSLMDEAGNTKDDVKLPEGEVGERIQK 162
Query: 435 DF-DSGKELLCTVLKSCGEECVIAVKQ 512
F + GK+ T+L + GE+ + VK+
Sbjct: 163 MFNEEGKDCNVTILTAMGEQACMDVKE 189
>UniRef50_Q86DY5 Cluster: Clone ZZZ427 mRNA sequence; n=2;
Bilateria|Rep: Clone ZZZ427 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 160
Score = 110 bits (265), Expect = 4e-23
Identities = 52/80 (65%), Positives = 58/80 (72%)
Frame = +1
Query: 52 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 231
M ED F TG+SGAS T P QCS LRK G+V++K RPCKI+EMSTSKTGKHG AKVHL
Sbjct: 1 MSTFEDEEFATGESGASKTEPKQCSLLRKGGYVLMKERPCKIMEMSTSKTGKHGSAKVHL 60
Query: 232 VGIDIFNGKSMKISVPPHTT 291
VGIDIF GK + P T
Sbjct: 61 VGIDIFTGKKYEEICPSSQT 80
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/88 (36%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 434
KKYE+ICPS+ M VP + R++YQL D+ DG+L+LM+D+ + E++ +PD D+G +++
Sbjct: 69 KKYEEICPSSQTMYVPIIARKEYQLIDVK-DGFLSLMSDDFCVLENIPVPDNDVGKEIQE 127
Query: 435 DFDSGKEL---LCTVLKSCGEECVIAVK 509
++S ++ + T++ + E+ AV+
Sbjct: 128 KWNSKGDMDNVIVTIVTTMDEQQAHAVR 155
>UniRef50_P80639 Cluster: Eukaryotic translation initiation factor
5A; n=58; Eukaryota|Rep: Eukaryotic translation
initiation factor 5A - Zea mays (Maize)
Length = 160
Score = 110 bits (264), Expect = 5e-23
Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = +1
Query: 52 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVH 228
M D E+ HFE+ D+GAS T+P Q +RKNGF+++K RPCK+VE+STSKTGKHGHAK H
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTVRKNGFIVIKNRPCKVVEVSTSKTGKHGHAKCH 60
Query: 229 LVGIDIFNGKSMKISVP 279
V IDIFNGK ++ VP
Sbjct: 61 FVAIDIFNGKKLEDIVP 77
Score = 96.3 bits (229), Expect = 9e-19
Identities = 42/86 (48%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLR 431
KK EDI PS+HN D+PHV R +YQL DIS+DG+++L+ +G+ ++DL++P D L Q++
Sbjct: 70 KKLEDIVPSSHNCDIPHVNRTEYQLIDISEDGFVSLLTSDGNTKDDLRLPTDETLVAQIK 129
Query: 432 TDFDSGKELLCTVLKSCGEECVIAVK 509
F+SGK+L+ TV + GEE + A+K
Sbjct: 130 EGFESGKDLVVTVQSAMGEEQICALK 155
>UniRef50_P34563 Cluster: Eukaryotic translation initiation factor
5A-1; n=5; Eukaryota|Rep: Eukaryotic translation
initiation factor 5A-1 - Caenorhabditis elegans
Length = 161
Score = 109 bits (262), Expect = 9e-23
Identities = 48/72 (66%), Positives = 59/72 (81%)
Frame = +1
Query: 64 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 243
++ F++ +SGA+ATFP QCSALRKN VM++GRPCKIVEMSTSKTGKHGHAKVH+V ID
Sbjct: 7 DEEQFDSAESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAID 66
Query: 244 IFNGKSMKISVP 279
IF K ++ P
Sbjct: 67 IFTTKKLEDICP 78
Score = 86.6 bits (205), Expect = 8e-16
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLM-ADNGDLREDLKIPDGDLGTQLR 431
KK EDICPSTHNMDVP VKR +Y L I +DG+ +LM ++ +L++DLK+P+GDLG +R
Sbjct: 71 KKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMPEGDLGNTIR 129
Query: 432 TDFDSGK-ELLCTVLKSCGEECVIAVK 509
+ + +L V+ +CGEE ++ K
Sbjct: 130 EALEKDEGSVLVQVVAACGEEAILGYK 156
>UniRef50_Q8MX76 Cluster: Eukaryotic translation initiation factor
5A; n=13; Alveolata|Rep: Eukaryotic translation
initiation factor 5A - Plasmodium falciparum
Length = 161
Score = 103 bits (247), Expect = 6e-21
Identities = 47/92 (51%), Positives = 70/92 (76%), Gaps = 6/92 (6%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP---DGDL--- 416
+KYEDICP++HNMDVP VKR + QL DI++DG+++L+ DNGD ++DL +P +G+L
Sbjct: 67 RKYEDICPTSHNMDVPVVKRTELQLIDITEDGFVSLLYDNGDTKDDLSLPKDTEGNLDEV 126
Query: 417 GTQLRTDFDSGKELLCTVLKSCGEECVIAVKQ 512
Q+R FD+GK +L +VL +CG+E +IA K+
Sbjct: 127 AKQIRNLFDNGKSVLVSVLSACGQEKIIAAKE 158
Score = 94.7 bits (225), Expect = 3e-18
Identities = 40/68 (58%), Positives = 52/68 (76%)
Frame = +1
Query: 76 FETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNG 255
++ D+GAS T+P+Q A++KNG VMLK PCK+V+ STSKTGKHGHAK H+VGIDIF G
Sbjct: 7 YDNIDAGASQTYPVQAGAIKKNGHVMLKEHPCKVVDYSTSKTGKHGHAKAHIVGIDIFTG 66
Query: 256 KSMKISVP 279
+ + P
Sbjct: 67 RKYEDICP 74
>UniRef50_Q5ZF92 Cluster: Eukaryotic translation initiation factor
5A-1; n=2; Eukaryota|Rep: Eukaryotic translation
initiation factor 5A-1 - Plantago major (Common
plantain)
Length = 159
Score = 102 bits (244), Expect = 1e-20
Identities = 45/73 (61%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Frame = +1
Query: 64 EDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGI 240
E+ FE D+GAS TFP Q +RKNG++ +K RPCK+VE+STSKTGKHGHAK H V I
Sbjct: 4 EEHQFEAQADAGASKTFPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHFVAI 63
Query: 241 DIFNGKSMKISVP 279
DIFNGK ++ VP
Sbjct: 64 DIFNGKKLEDIVP 76
Score = 102 bits (244), Expect = 1e-20
Identities = 45/86 (52%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD-LGTQLR 431
KK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ DNG ++DL++P D L TQ++
Sbjct: 69 KKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLRLPTDDALATQIK 128
Query: 432 TDFDSGKELLCTVLKSCGEECVIAVK 509
F GK+L+ +V+ + GEE + A+K
Sbjct: 129 EGFAEGKDLVVSVMSAMGEEQINAIK 154
>UniRef50_Q8LSN0 Cluster: Translation initiation factor 5A; n=2;
Alveolata|Rep: Translation initiation factor 5A -
Crypthecodinium cohnii (Dinoflagellate)
Length = 162
Score = 100 bits (239), Expect = 6e-20
Identities = 42/72 (58%), Positives = 55/72 (76%)
Frame = +1
Query: 64 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 243
ED FE+ D+GASAT+P Q +RK ++M+KGRPCK +E+STSKTGKHGHAK H+V +D
Sbjct: 4 EDHTFESTDAGASATYPQQAGEIRKGSYLMIKGRPCKCIEVSTSKTGKHGHAKAHIVALD 63
Query: 244 IFNGKSMKISVP 279
IF+GK + P
Sbjct: 64 IFSGKKYEDLCP 75
Score = 53.6 bits (123), Expect = 7e-06
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP---------- 404
KKYED+CP++HN+DVP VKR +Y LT DG L D ++DL +P
Sbjct: 68 KKYEDLCPTSHNLDVPFVKRTEYLLT---ADGTLARACDGH--KDDLNLPTVVKVGEPTD 122
Query: 405 -DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKQT 515
D + ++ + G + V + GEE +I K T
Sbjct: 123 RDKKVTAEILESVEKGTTIFVIVQAASGEEKIIQTKTT 160
>UniRef50_Q249P9 Cluster: Translation initiation factor eIF-5A
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Translation initiation factor eIF-5A family protein -
Tetrahymena thermophila SB210
Length = 184
Score = 92.3 bits (219), Expect = 2e-17
Identities = 35/72 (48%), Positives = 54/72 (75%)
Frame = +1
Query: 64 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 243
++ +F+ G++G+S T+PMQ ++KNG+ ML+G PCK+ EM+T K GKHGHAK ++G+D
Sbjct: 3 DEENFQQGEAGSSYTYPMQAGNIKKNGYAMLRGFPCKVTEMTTCKAGKHGHAKATIIGVD 62
Query: 244 IFNGKSMKISVP 279
IF G+ + S P
Sbjct: 63 IFTGRKYEDSCP 74
Score = 69.3 bits (162), Expect(2) = 1e-13
Identities = 25/45 (55%), Positives = 39/45 (86%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLRE 389
+KYED CP++HNM++P VK+++YQL +I+DD YLTL+ +NG+ +E
Sbjct: 67 RKYEDSCPTSHNMEIPFVKKQEYQLMNIADDNYLTLLLENGETKE 111
Score = 30.3 bits (65), Expect(2) = 1e-13
Identities = 10/30 (33%), Positives = 25/30 (83%)
Frame = +3
Query: 423 QLRTDFDSGKELLCTVLKSCGEECVIAVKQ 512
+LR+DF+S K++L +++++ G+E +I+ ++
Sbjct: 152 KLRSDFESQKDILISIIQAMGQEKMISYRE 181
>UniRef50_A0DV26 Cluster: Chromosome undetermined scaffold_65, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_65,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 161
Score = 87.4 bits (207), Expect = 4e-16
Identities = 37/72 (51%), Positives = 51/72 (70%)
Frame = +1
Query: 64 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 243
++ FE G++G+S T+ +L+K G+VMLKG PCKI ++STSK GKHGHAK +VG D
Sbjct: 4 DENQFEQGNAGSSHTYTESAGSLKKGGYVMLKGHPCKITDVSTSKAGKHGHAKASIVGKD 63
Query: 244 IFNGKSMKISVP 279
IF K+ + S P
Sbjct: 64 IFTNKTYEDSAP 75
Score = 87.4 bits (207), Expect = 4e-16
Identities = 40/92 (43%), Positives = 63/92 (68%), Gaps = 4/92 (4%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP----DGDLGT 422
K YED P++HN+DVP V +++Y L DI DG++ LM ++G +EDLK+P D +L
Sbjct: 68 KTYEDSAPTSHNIDVPFVTKKEYTLMDIQGDGFVILMNEDGSTKEDLKLPETEDDFNLVK 127
Query: 423 QLRTDFDSGKELLCTVLKSCGEECVIAVKQTQ 518
++R FD+GK+LL +VL + GEE ++ ++ Q
Sbjct: 128 EIREMFDAGKDLLISVLSAMGEEKIVGSREAQ 159
>UniRef50_Q4QA21 Cluster: Eukaryotic initiation factor 5a, putative;
n=8; Trypanosomatidae|Rep: Eukaryotic initiation factor
5a, putative - Leishmania major
Length = 166
Score = 83.4 bits (197), Expect = 7e-15
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = +1
Query: 67 DTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDI 246
D + G AS T+P+ AL+K G+V + GRPCK++++S SKTGKHGHAKV +V DI
Sbjct: 7 DFSHQGGGDNASKTYPLPAGALKKGGYVCINGRPCKVIDLSVSKTGKHGHAKVSIVATDI 66
Query: 247 FNGKSMKISVP 279
F G ++ P
Sbjct: 67 FTGNRLEDQAP 77
Score = 71.7 bits (168), Expect = 2e-11
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Frame = +3
Query: 258 KYEDICPSTHNMDVPHVKREDYQLTDISDD------GYLTLMADNGDLREDLKIP-DGDL 416
+ ED PSTHN++VP VK Y + DI + +L+LM D G+ REDL +P D L
Sbjct: 71 RLEDQAPSTHNVEVPFVKTFTYSVLDIQPNEDSSLPSHLSLMDDEGESREDLDMPPDAAL 130
Query: 417 GTQLRTDFDSGKELLCTVLKSCGEECVIAVK 509
Q++ FDSGKE+L V+ + G E V+ K
Sbjct: 131 AAQIKEQFDSGKEVLVVVVSAMGTEQVLQTK 161
>UniRef50_UPI0000498A83 Cluster: translation initiation factor
eIF-5A; n=2; Entamoeba histolytica HM-1:IMSS|Rep:
translation initiation factor eIF-5A - Entamoeba
histolytica HM-1:IMSS
Length = 165
Score = 81.8 bits (193), Expect = 2e-14
Identities = 37/86 (43%), Positives = 57/86 (66%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 434
KKY D CP+ N+DVP +KR +Y L DI DDGYLTL+ ++G +R D+K+P +LG ++
Sbjct: 79 KKYTDCCPAHSNVDVPVIKRVEYSLQDI-DDGYLTLLDEDGTVRSDIKLPKNELGKEIEH 137
Query: 435 DFDSGKELLCTVLKSCGEECVIAVKQ 512
+F+ K L+C + +E V+ K+
Sbjct: 138 EFNE-KSLICIIQVFGDQEMVVGYKE 162
Score = 66.9 bits (156), Expect = 7e-10
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = +1
Query: 106 TFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKSMKISVPPH 285
T P + +L+ GFV++ PCKI E + +K GKHGHAKV L GID+F GK P H
Sbjct: 29 TIPTKAGSLKVGGFVVIGTFPCKITEFNKTKDGKHGHAKVTLTGIDVFTGKKYTDCCPAH 88
Query: 286 T 288
+
Sbjct: 89 S 89
>UniRef50_Q98RY8 Cluster: Translation initiation factor eIF-5A.2;
n=1; Guillardia theta|Rep: Translation initiation factor
eIF-5A.2 - Guillardia theta (Cryptomonas phi)
Length = 158
Score = 80.6 bits (190), Expect = 5e-14
Identities = 33/64 (51%), Positives = 46/64 (71%)
Frame = +1
Query: 88 DSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKSMK 267
D+GAS T P++ +K G +++KG PCKI+++STSKTGKHGHAK + +DIF GK +
Sbjct: 11 DNGASETTPIKAGNCKKGGLLVIKGNPCKIIDISTSKTGKHGHAKAIITAVDIFTGKKYQ 70
Query: 268 ISVP 279
S P
Sbjct: 71 ESAP 74
Score = 78.6 bits (185), Expect = 2e-13
Identities = 31/88 (35%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLK--IPDGDLGTQL 428
KKY++ P++HN+D P++ + +YQL I +DG+++LM ++G++REDL + + ++ ++
Sbjct: 67 KKYQESAPTSHNLDQPNLTKTEYQLIHIEEDGFVSLMDEDGNIREDLSLDLKNDEIHVKI 126
Query: 429 RTDFDSGKELLCTVLKSCGEECVIAVKQ 512
+ +FD KE++ TV+K +E +I+ K+
Sbjct: 127 KNEFDQSKEIVVTVMKCLQKEKIISFKE 154
>UniRef50_Q2TWV6 Cluster: Translation initiation factor 5A; n=1;
Aspergillus oryzae|Rep: Translation initiation factor 5A
- Aspergillus oryzae
Length = 154
Score = 74.9 bits (176), Expect = 2e-12
Identities = 31/82 (37%), Positives = 56/82 (68%)
Frame = +3
Query: 267 DICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDS 446
D ST ++++PHV R +Y L +I D+G+L L +G +++++K+P G LG Q+ DF++
Sbjct: 69 DDIESTQSVEIPHVYRNEYMLVNI-DEGFLNLTNQDGTMKDNVKVPGGGLGQQIEQDFEA 127
Query: 447 GKELLCTVLKSCGEECVIAVKQ 512
G +LL V+ + GEE ++V++
Sbjct: 128 GTDLLIAVISAMGEEHAVSVRE 149
Score = 44.0 bits (99), Expect = 0.005
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = +1
Query: 67 DTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDI 246
D FE AS T+ S L K V+++GRPCKI+E+ SK G +HLV DI
Sbjct: 8 DQTFEQHQQHASPTYAALVSTLTKGAHVIIRGRPCKILEI--SKIG----TNIHLVARDI 61
Query: 247 FNGK 258
F +
Sbjct: 62 FTDR 65
>UniRef50_A2DEK5 Cluster: Translation initiation factor eIF-5A
family protein; n=2; Trichomonas vaginalis G3|Rep:
Translation initiation factor eIF-5A family protein -
Trichomonas vaginalis G3
Length = 167
Score = 71.3 bits (167), Expect = 3e-11
Identities = 27/71 (38%), Positives = 47/71 (66%)
Frame = +1
Query: 67 DTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDI 246
D + D+G+ + + L+K G+V+++GRPC++V+++ SKTGKHGHAK + G D+
Sbjct: 11 DLEIQEVDAGSQEKATIPVNKLKKGGYVLIEGRPCRVVDITKSKTGKHGHAKAGIAGTDL 70
Query: 247 FNGKSMKISVP 279
F G+ + +P
Sbjct: 71 FTGRRYETHLP 81
Score = 55.2 bits (127), Expect = 2e-06
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKI-PDGDLGTQLR 431
++YE P++H ++VP V R DY L +I DDG+ L+ +G LRED+ + P+G+ Q
Sbjct: 74 RRYETHLPTSHEIEVPFVDRSDYGLINI-DDGHTQLLTLDGTLREDVDLPPEGNEMRQRV 132
Query: 432 TDF-----DSGKELLCTVLKSCGEECVIAVKQT 515
D ++ +++ TVL S GE ++ K++
Sbjct: 133 IDLFNECVNTNDQVVVTVLSSNGENLIVDCKKS 165
>UniRef50_Q7QR21 Cluster: GLP_576_14492_14043; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_576_14492_14043 - Giardia lamblia
ATCC 50803
Length = 149
Score = 65.7 bits (153), Expect = 2e-09
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 109 FPMQCSALRKNGFVMLKGR-PCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKSMKISVP 279
+P Q L+K ++++K PCK+ E+STSKTGKHGHAK + +DIF GK + S P
Sbjct: 9 YPKQAGNLKKGDYIVMKDVFPCKVTEISTSKTGKHGHAKCSITAVDIFTGKKYEDSCP 66
Score = 58.4 bits (135), Expect = 2e-07
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP--DGDLGTQL 428
KKYED CPS+HN+ P+V R DY L +I DD Y D D + +++P + +L L
Sbjct: 59 KKYEDSCPSSHNIMCPNVSRTDYLLINI-DDEY-AFYFDQNDAEQQVRLPLENEELVADL 116
Query: 429 RTDFDSG-KELLCTVLKSCGEECVIAVK 509
R F++G K ++ + ++ E ++A K
Sbjct: 117 RAAFEAGDKTIMINIQRAMNTEGIVAFK 144
>UniRef50_Q9YA53 Cluster: Translation initiation factor 5A; n=3;
Archaea|Rep: Translation initiation factor 5A -
Aeropyrum pernix
Length = 139
Score = 63.3 bits (147), Expect = 8e-09
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +1
Query: 130 LRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKSMKISVPPHT 288
L+K ++++ G PC+IVEMS +KTGKHG AK H+V I +F+G+ + P T
Sbjct: 11 LKKGSYIVIDGEPCRIVEMSRAKTGKHGSAKAHVVAICVFSGQKKSLVAPVDT 63
>UniRef50_P56635 Cluster: Translation initiation factor 5A; n=15;
Archaea|Rep: Translation initiation factor 5A -
Pyrobaculum aerophilum
Length = 138
Score = 58.4 bits (135), Expect = 2e-07
Identities = 21/55 (38%), Positives = 37/55 (67%)
Frame = +1
Query: 115 MQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKSMKISVP 279
++ L++ +V++ G PC++VE+ SKTGKHG AK +V + +F+G +S+P
Sbjct: 12 VEAGELKEGSYVVIDGEPCRVVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLP 66
>UniRef50_A0ECS4 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 147
Score = 54.8 bits (126), Expect = 3e-06
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +3
Query: 255 KKYEDICPSTHN-MDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPD-GDLGTQL 428
K+ I S H +++P ++ E+Y L I +D +LTL+ G +RED+K+P +L +L
Sbjct: 58 KQIVKIQRSIHGKLEIPLIQFEEYSLIGIQNDDFLTLLNSKGTIREDIKMPQFKELANKL 117
Query: 429 RTDFDSGKELLCTVLKSCGEE 491
R F+ GK+++ ++K +E
Sbjct: 118 RMWFEEGKDIIVQIIKYMDKE 138
>UniRef50_A3BI23 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 175
Score = 54.4 bits (125), Expect = 4e-06
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = +3
Query: 303 HVKREDYQLTDISDDG-YLTLMADNGDLREDLKIPDGD-LGTQLRTDFDSGKELLCTVLK 476
H+ R +YQL DIS+DG +++L+ ++G+ ++DL +P D L Q++T F GK+++ TV+
Sbjct: 46 HMNRTNYQLIDISEDGLFVSLLTESGNTKDDLGLPTYDNLLGQIKTGFGEGKDVVVTVMS 105
Query: 477 SCG 485
+ G
Sbjct: 106 AMG 108
>UniRef50_Q02217 Cluster: Putative uncharacterized protein
YEL034C-A; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YEL034C-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 200
Score = 54.0 bits (124), Expect = 5e-06
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = -1
Query: 282 WRDRYLHTFSIEDINPNQVNFSVAVLSGFGCGHFNNLAWTTLQHNETIFTQ 130
WR + + EDIN NQ++FSV VL+ GH +NL W+TL NET+ +Q
Sbjct: 106 WRQIF-QLLTSEDINGNQMDFSVTVLTSLRSGHVDNLTWSTLDDNETVLSQ 155
>UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_85, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 514
Score = 53.2 bits (122), Expect = 9e-06
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKI 401
KK E+ PS+HN DVPHV R DYQL DI +DGY + +R ++ I
Sbjct: 255 KKLENFVPSSHNCDVPHVNRIDYQLIDIPEDGYSDIKVKVTGMRMEIII 303
Score = 50.8 bits (116), Expect = 5e-05
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGY 353
KK E + PS+HN DVPHV DYQL DI +DGY
Sbjct: 380 KKLEKVVPSSHNCDVPHVNGTDYQLIDILEDGY 412
>UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 414
Score = 52.8 bits (121), Expect = 1e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGY 353
KK E+ PS+HN DVPHV R DYQL DI +DGY
Sbjct: 212 KKLENFVPSSHNCDVPHVNRIDYQLIDIPEDGY 244
>UniRef50_Q2U2G6 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 132
Score = 50.0 bits (114), Expect = 8e-05
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +1
Query: 43 NTTMGDIE--DTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGH 216
NT D E D FE G FP CS LR G V L+G PC+I ++ TS +
Sbjct: 6 NTRQEDNEQYDVSFEIGGRQIDG-FPTPCSNLRAGGLVYLRGHPCEITDIHTSPASR--- 61
Query: 217 AKVHLVGIDIFNGKSMKISVPPHTT 291
+ V +VG DI G+ M P T
Sbjct: 62 SVVQIVGFDIHTGQFMDDQYPLRET 86
>UniRef50_O29612 Cluster: Translation initiation factor 5A; n=7;
Euryarchaeota|Rep: Translation initiation factor 5A -
Archaeoglobus fulgidus
Length = 128
Score = 49.6 bits (113), Expect = 1e-04
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +1
Query: 130 LRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKSMKISVPPHTTWTYL 303
LR+ G+V++ PC+I+ +S SK GKHG AK + I IF+ + I V P T Y+
Sbjct: 10 LREGGYVVIDDEPCEILSISVSKPGKHGAAKARIDAIGIFDSQKRSI-VQPVTAKIYV 66
>UniRef50_Q8U1E4 Cluster: Translation initiation factor 5A; n=7;
Euryarchaeota|Rep: Translation initiation factor 5A -
Pyrococcus furiosus
Length = 138
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1
Query: 115 MQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKSMKISVP 279
+Q S L+ ++++ PC+IV ++ S GKHG AK + + IF+GK I P
Sbjct: 7 VQVSKLKPGRYIIIDDEPCRIVNITVSSPGKHGSAKARIEAVGIFDGKVRSIVKP 61
>UniRef50_Q01GB7 Cluster: NHL repeat; n=2; Ostreococcus|Rep: NHL
repeat - Ostreococcus tauri
Length = 1783
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 5/47 (10%)
Frame = +3
Query: 354 LTLMADNGDLREDLKIPDG-----DLGTQLRTDFDSGKELLCTVLKS 479
++LMA+NGD REDLK+P G L Q+R FD GKE+ T+L S
Sbjct: 1 MSLMAENGDTREDLKLPSGHDDADKLAEQIRVAFDEGKEVAVTILCS 47
>UniRef50_A0RUN7 Cluster: Translation elongation factor P
(EF-P)/translation initiation factor 5A; n=2;
Thermoprotei|Rep: Translation elongation factor P
(EF-P)/translation initiation factor 5A - Cenarchaeum
symbiosum
Length = 157
Score = 47.2 bits (107), Expect = 6e-04
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Frame = +1
Query: 112 PMQCSALRKNGFVMLK------GRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGK 258
P + +L+ +++L G PC+I E TSK GKHG AK +VG+ +F+G+
Sbjct: 25 PSELGSLKIGSYILLPVGDQATGEPCRISEYDTSKPGKHGAAKARIVGVGVFDGQ 79
>UniRef50_Q6L150 Cluster: Translation initiation factor 5A; n=4;
Thermoplasmatales|Rep: Translation initiation factor 5A
- Picrophilus torridus
Length = 129
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +1
Query: 130 LRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKSMKISVP 279
L+ ++++ PC+IV+++ SK GKHG AK +V I +F+ + + P
Sbjct: 11 LKVGRYILIDDSPCRIVDITMSKPGKHGEAKGRIVAIGVFDNQKHSVVYP 60
>UniRef50_Q2FQ93 Cluster: Translation initiation factor 5A; n=4;
Euryarchaeota|Rep: Translation initiation factor 5A -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 127
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 130 LRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKSMKISVP 279
L++ ++++ PCKI+ +S SK GKHG AK L + IF+G I P
Sbjct: 10 LKEGKYLLVDDEPCKILSISVSKPGKHGAAKARLDVVGIFDGVKRSIVQP 59
>UniRef50_Q9HP78 Cluster: Translation initiation factor 5A; n=5;
Halobacteriaceae|Rep: Translation initiation factor 5A -
Halobacterium salinarium (Halobacterium halobium)
Length = 127
Score = 44.8 bits (101), Expect = 0.003
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +1
Query: 130 LRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKSMKISVP 279
L++ +VM++ C+I ST+K GKHG AK + +F+GK +S P
Sbjct: 11 LQEGNYVMMEDAACQINAYSTAKPGKHGSAKARIEAEGVFDGKKRSLSQP 60
>UniRef50_Q6LYN8 Cluster: Translation initiation factor 5A; n=5;
Methanococcus|Rep: Translation initiation factor 5A -
Methanococcus maripaludis
Length = 131
Score = 44.4 bits (100), Expect = 0.004
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +1
Query: 100 SATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIF 249
+ T P + AL+ +V++ G C++++ + SK GKHG AKV L + IF
Sbjct: 2 AGTKPSELGALKVGQYVVIDGIACRVMDTAHSKPGKHGGAKVRLTAMGIF 51
>UniRef50_Q5YEV5 Cluster: Translation initiation factor 5A; n=1;
Bigelowiella natans|Rep: Translation initiation factor
5A - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 173
Score = 43.6 bits (98), Expect = 0.007
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 124 SALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFN-GKSMKISVPPH 285
S ++ ++MLKGRP +V+ + +K GKHGH K ++V D+ K + P H
Sbjct: 15 SHVKPGTYLMLKGRPTSVVKATFAKPGKHGHVKCNIVAKDLLKVDKKYQHMCPGH 69
>UniRef50_P87252 Cluster: Woronin body major protein precursor; n=4;
Pezizomycotina|Rep: Woronin body major protein precursor
- Neurospora crassa
Length = 176
Score = 43.6 bits (98), Expect = 0.007
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 82 TGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTS-KTGKHGHAKVHLVGIDIF 249
TG AS T + C +R ++L+GRPC+++ +STS TG+H + +G+D+F
Sbjct: 24 TGTGSASQTVTIPCHHIRLGDILILQGRPCQVIRISTSAATGQHRY-----LGVDLF 75
>UniRef50_Q9UW16 Cluster: Vacuolar-ATPase; n=3; Sordariomycetes|Rep:
Vacuolar-ATPase - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 181
Score = 39.5 bits (88), Expect = 0.11
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 85 GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTS-KTGKHGHAKVHLVGIDIFNGKS 261
G A T + C +R ++L+GRPC+++ +STS TG+H + V L ++ +S
Sbjct: 30 GGDYAPNTVSIPCHHIRLGDILLLQGRPCQVIRISTSAATGQHRYLGVDLFTKEL-REES 88
Query: 262 MKISVP 279
IS P
Sbjct: 89 SSISTP 94
>UniRef50_Q74N24 Cluster: Translation initiation factor 5A; n=2;
Nanoarchaeum equitans|Rep: Translation initiation factor
5A - Nanoarchaeum equitans
Length = 144
Score = 38.3 bits (85), Expect = 0.26
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 160 GRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKSMKISVP 279
G KIV + TSK GKHG AK + I + +GK + I P
Sbjct: 23 GEVYKIVSIETSKPGKHGSAKARIEAISVTSGKKIVIIKP 62
>UniRef50_Q5LR08 Cluster: Putative uncharacterized protein; n=1;
Silicibacter pomeroyi|Rep: Putative uncharacterized
protein - Silicibacter pomeroyi
Length = 138
Score = 35.9 bits (79), Expect = 1.4
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Frame = +3
Query: 300 PHVKR--EDYQLTDISDDGYLTLMADNG-----DLREDLKIPDGDLGTQLRTDFDSGKEL 458
PHVK E Y DI+ GYL L +D G + +L DG G L TD +G EL
Sbjct: 51 PHVKEFLERYSYPDINRPGYLILESDEGRFMNHSMYPNLDFADGIWGVAL-TDIPAGTEL 109
Query: 459 LC 464
C
Sbjct: 110 TC 111
>UniRef50_A7EAR5 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 712
Score = 35.1 bits (77), Expect = 2.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 258 KYEDICPSTHNMDVPHVKREDYQLTD 335
KYED CPS+HN D P ++E + D
Sbjct: 238 KYEDNCPSSHNYDAPTRRKEQWAAND 263
>UniRef50_Q2H8A0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 199
Score = 34.3 bits (75), Expect = 4.3
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 106 TFPMQCSALRKNGFVMLKGRPCKIVEMSTS-KTGKHGHAKVHLV 234
T P+ C +R +MLK PC+++++ TS TG++ + V ++
Sbjct: 41 TIPIPCHDIRLGDILMLKDSPCRVIQILTSAATGRYTYRGVDIL 84
>UniRef50_A5ZTK9 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 1061
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +3
Query: 273 CPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGK 452
CP +++ PH ++D + DIS++ + + LR+D + GD R+++D+ K
Sbjct: 536 CPVCGSIEHPHPAKKDVESVDISEEKLQNMQTNVDKLRKDQEKAAGD-AAAARSEYDTRK 594
Query: 453 E 455
+
Sbjct: 595 D 595
>UniRef50_A5BEH2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 636
Score = 33.5 bits (73), Expect = 7.5
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 496 THSSPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRRSPLSAIRVR 353
THS P T H + PL +C P PS +L RRSP R+R
Sbjct: 41 THSIPYTHQT-HQYTHPLPFISISCSPXQPSPLLPPPRRSPAGTSRIR 87
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 855,534,636
Number of Sequences: 1657284
Number of extensions: 17432904
Number of successful extensions: 51059
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 47394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50909
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -