Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0258.Seq
(900 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic t... 157 3e-38
AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p pro... 155 8e-38
AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic i... 155 8e-38
AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB... 155 8e-38
AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA... 155 8e-38
AY121665-1|AAM51992.1| 709|Drosophila melanogaster RE10861p pro... 31 2.8
AE014296-2303|AAF49800.1| 709|Drosophila melanogaster CG10710-P... 31 2.8
>AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic
translation initiationfactor 5a protein.
Length = 159
Score = 157 bits (380), Expect = 3e-38
Identities = 69/85 (81%), Positives = 78/85 (91%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 434
KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM D+GDLREDLK+P+G+LG QLR
Sbjct: 68 KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEGELGEQLRL 127
Query: 435 DFDSGKELLCTVLKSCGEECVIAVK 509
DFDSGK+LLCTVLK+CGEECVIA+K
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIK 152
Score = 126 bits (304), Expect = 4e-29
Identities = 58/76 (76%), Positives = 65/76 (85%)
Frame = +1
Query: 52 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 231
M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 232 VGIDIFNGKSMKISVP 279
VGIDIF+ K + P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p
protein.
Length = 159
Score = 155 bits (376), Expect = 8e-38
Identities = 68/85 (80%), Positives = 78/85 (91%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 434
KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR
Sbjct: 68 KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127
Query: 435 DFDSGKELLCTVLKSCGEECVIAVK 509
DFDSGK+LLCTVLK+CGEECVIA+K
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIK 152
Score = 123 bits (296), Expect = 4e-28
Identities = 57/76 (75%), Positives = 64/76 (84%)
Frame = +1
Query: 52 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 231
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 232 VGIDIFNGKSMKISVP 279
VGIDIF+ K + P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic
initiation factor 5A protein.
Length = 159
Score = 155 bits (376), Expect = 8e-38
Identities = 68/85 (80%), Positives = 78/85 (91%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 434
KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR
Sbjct: 68 KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127
Query: 435 DFDSGKELLCTVLKSCGEECVIAVK 509
DFDSGK+LLCTVLK+CGEECVIA+K
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIK 152
Score = 126 bits (304), Expect = 4e-29
Identities = 58/76 (76%), Positives = 65/76 (85%)
Frame = +1
Query: 52 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 231
M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 232 VGIDIFNGKSMKISVP 279
VGIDIF+ K + P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB,
isoform B protein.
Length = 159
Score = 155 bits (376), Expect = 8e-38
Identities = 68/85 (80%), Positives = 78/85 (91%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 434
KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR
Sbjct: 68 KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127
Query: 435 DFDSGKELLCTVLKSCGEECVIAVK 509
DFDSGK+LLCTVLK+CGEECVIA+K
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIK 152
Score = 123 bits (296), Expect = 4e-28
Identities = 57/76 (75%), Positives = 64/76 (84%)
Frame = +1
Query: 52 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 231
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 232 VGIDIFNGKSMKISVP 279
VGIDIF+ K + P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA,
isoform A protein.
Length = 159
Score = 155 bits (376), Expect = 8e-38
Identities = 68/85 (80%), Positives = 78/85 (91%)
Frame = +3
Query: 255 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 434
KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR
Sbjct: 68 KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127
Query: 435 DFDSGKELLCTVLKSCGEECVIAVK 509
DFDSGK+LLCTVLK+CGEECVIA+K
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIK 152
Score = 123 bits (296), Expect = 4e-28
Identities = 57/76 (75%), Positives = 64/76 (84%)
Frame = +1
Query: 52 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 231
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 232 VGIDIFNGKSMKISVP 279
VGIDIF+ K + P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>AY121665-1|AAM51992.1| 709|Drosophila melanogaster RE10861p
protein.
Length = 709
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 203 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 51
P D+S +LH P S T L + + + A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602
>AE014296-2303|AAF49800.1| 709|Drosophila melanogaster CG10710-PA
protein.
Length = 709
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 203 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 51
P D+S +LH P S T L + + + A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,109,957
Number of Sequences: 53049
Number of extensions: 845969
Number of successful extensions: 2654
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2651
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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