Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0257.Seq
         (900 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    23   3.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   7.5  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   7.5  

>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 311 YEKIFFRNFQRVRD*FNDTSECVDRNDTRSERVL 210
           Y +I  + +Q +RD F D+   +  NDT   + L
Sbjct: 15  YPEIQEKVYQELRDIFQDSDRPITFNDTLQMKYL 48


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 583 SWRNSEEGPHRFA 621
           +WR +  GPHR A
Sbjct: 597 TWRRNFHGPHRLA 609


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 583 SWRNSEEGPHRFA 621
           +WR +  GPHR A
Sbjct: 489 TWRRNFHGPHRLA 501


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 52  DGTFVSCVRSPSARYV 99
           DGT + C++S  AR +
Sbjct: 251 DGTMIKCLKSRPARQI 266


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 52  DGTFVSCVRSPSARYV 99
           DGT + C++S  AR +
Sbjct: 251 DGTMIKCLKSRPARQI 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,034
Number of Sequences: 336
Number of extensions: 4327
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)