Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0257.Seq
         (900 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    26   1.4  
AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like precu...    23   9.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.6  

>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -1

Query: 465 GTGPPPVSSQTFKQTRTSPRLHGCDNRRVALASALRQET 349
           GT  PP  SQ  KQT  +P   G  NRR  +  A  Q T
Sbjct: 31  GTNRPPNRSQKAKQTVKTPPAQG--NRRSGVTCANCQTT 67


>AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like
           precursor protein.
          Length = 267

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 228 RIVPIHAFGGIIKLITHALKIPKKNFL 308
           R++    FGGII+ I+   +IP++  +
Sbjct: 53  RLLRYFIFGGIIQAISAETRIPRRRLV 79


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 532 NPGVTQLNRLAAHPPFASWRNS 597
           +PG     +L+ HPP AS R+S
Sbjct: 835 HPGAQTQPQLSQHPPGASGRSS 856


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 903,914
Number of Sequences: 2352
Number of extensions: 18989
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)