Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0255.Seq
         (505 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK097644-1|BAC05131.1|  630|Homo sapiens protein ( Homo sapiens ...    30   5.3  
BC004854-1|AAH04854.2|  378|Homo sapiens DNPEP protein protein.        29   9.2  

>AK097644-1|BAC05131.1|  630|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40325 fis, clone TESTI2031007. ).
          Length = 630

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 284 APLVARADSGRVAPAHATFALSYSLSIGLDR 376
           +P+V+    GR+AP    F LS  L +GL+R
Sbjct: 44  SPVVSNKCEGRMAPPETKFPLSKGLEMGLER 74


>BC004854-1|AAH04854.2|  378|Homo sapiens DNPEP protein protein.
          Length = 378

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +3

Query: 348 LTLSQSVSIALSLSFSLHFDTSVAYLRDVT 437
           L+LS S+S++LSLS SL    S  + RD+T
Sbjct: 9   LSLSLSLSLSLSLSLSLSLSRSTWFDRDLT 38


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,446,998
Number of Sequences: 237096
Number of extensions: 1000993
Number of successful extensions: 1986
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1986
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)