Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0255.Seq
         (505 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023913-1|ABA81847.1|  284|Drosophila melanogaster AT13385p pro...    28   6.2  
BT012336-1|AAS77461.1|  284|Drosophila melanogaster AT16075p pro...    28   6.2  
AE013599-633|AAM68841.1|  284|Drosophila melanogaster CG30366-PA...    28   6.2  
AE014298-2878|AAF48975.1|  743|Drosophila melanogaster CG14204-P...    28   8.3  

>BT023913-1|ABA81847.1|  284|Drosophila melanogaster AT13385p
           protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 127 VYITPTTKTIRASCCRNS-QPLEILYRIAR*LPG 29
           V  +P  K ++  CC ++ +P EILYRI    PG
Sbjct: 151 VECSPVKKRLKKVCCLDAIEPPEILYRIRPPCPG 184


>BT012336-1|AAS77461.1|  284|Drosophila melanogaster AT16075p
           protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 127 VYITPTTKTIRASCCRNS-QPLEILYRIAR*LPG 29
           V  +P  K ++  CC ++ +P EILYRI    PG
Sbjct: 151 VECSPVKKRLKKVCCLDAIEPPEILYRIRPPCPG 184


>AE013599-633|AAM68841.1|  284|Drosophila melanogaster CG30366-PA
           protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 127 VYITPTTKTIRASCCRNS-QPLEILYRIAR*LPG 29
           V  +P  K ++  CC ++ +P EILYRI    PG
Sbjct: 151 VECSPVKKRLKKVCCLDAIEPPEILYRIRPPCPG 184


>AE014298-2878|AAF48975.1|  743|Drosophila melanogaster CG14204-PA
           protein.
          Length = 743

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +3

Query: 234 YSGTRMRFYFTEIYIRWHRSSLAQIPVVW 320
           YSG +M +Y+T +Y++ + +S   +P  W
Sbjct: 404 YSGCKMTWYWTLLYVQNYATSDVCVPHTW 432


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,281,426
Number of Sequences: 53049
Number of extensions: 336857
Number of successful extensions: 732
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)