Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0253.Seq
(889 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3H7.07c |||phosphoserine phosphatase |Schizosaccharomyces po... 59 1e-09
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.072
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.095
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 32 0.095
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 31 0.17
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 31 0.22
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 30 0.38
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.88
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.88
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 26 6.2
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.2
SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomy... 26 8.2
>SPBC3H7.07c |||phosphoserine phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 298
Score = 58.8 bits (136), Expect = 1e-09
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +1
Query: 268 VCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRP-NVGQ 444
V FD+DST+IQ E IDELA G EV +T+ AM G + FQE+L++R+ +++ +V
Sbjct: 79 VVFDMDSTLIQQECIDELAAEAGIQKEVATITSLAMNGEIDFQESLRRRVSLLQGLSVDV 138
Query: 445 IREFIEKFPVRLTPGITEL 501
I + I K + TPG +L
Sbjct: 139 INKVIGK--ITFTPGAKQL 155
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 32.7 bits (71), Expect = 0.072
Identities = 30/108 (27%), Positives = 55/108 (50%)
Frame = -3
Query: 482 VSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSMPS 303
+S +G S S+ +G SS +F S + P +S+ S +SSP + SSS
Sbjct: 121 LSYSGTISSTSIAPSMIGTRTSSSYFITS-SSSTP--SSSSSSSSSSPSSSSSKSSSSSK 177
Query: 302 SCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTAGCFSN 159
S + S+SK + S+ ++ +S ++S S + S+S+++ FS+
Sbjct: 178 SSSSSSSSSKSSSSS--SSSSKSSSSSSSSSKSSASPSSSKSSSKFSS 223
Score = 31.1 bits (67), Expect = 0.22
Identities = 19/69 (27%), Positives = 39/69 (56%)
Frame = -3
Query: 350 TSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTAG 171
+S+P + +SSS PSS + S+S ++ S+ ++ S ++S + +SS+S+++
Sbjct: 151 SSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSA 210
Query: 170 CFSNCKEPS 144
S+ K S
Sbjct: 211 SPSSSKSSS 219
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 32.3 bits (70), Expect = 0.095
Identities = 33/110 (30%), Positives = 56/110 (50%)
Frame = -3
Query: 503 TNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNL 324
T+S P VS T + + +S PT S L + + P +S+ S LTSS +L
Sbjct: 182 TSSSQPSVSSTSSSTFSSAA-PT-STSSSYLSSSSVVSSSSSPSSSSSSTLTSS----SL 235
Query: 323 ASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTA 174
++SS+PS+ + STS S+ ++ S ++S + +SS+S T+
Sbjct: 236 STSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTS 285
Score = 29.1 bits (62), Expect = 0.88
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Frame = -3
Query: 503 TNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVS-LLTSSPFPQN 327
+ S IP S + + + +SL + SS +S ++I +S+ S TSS +
Sbjct: 236 STSSIPSTSSSSSSTSSSLSSSSSSSTASSS--SSSSSIISSSSSSSSSPTSTSSTISSS 293
Query: 326 LASSSMP-SSCMTVESTSKQTQSAV*TTPGQSVGATSR-*STPVRASST 186
+SSS P S+ T+ S+S + S T S+ ++S S+P +SST
Sbjct: 294 SSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSST 342
Score = 28.3 bits (60), Expect = 1.5
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = -3
Query: 419 SSLFFKASWNVILPPIASAVSLLTSSPFPQNLASS--SMPSSCMTVESTSKQTQSAV*TT 246
SS +S + P S+ S TSS + +SS S SS ++ S+S + S+ +T
Sbjct: 227 SSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTST 286
Query: 245 PGQSVGATSR*STPVRASSTSRTAGCFSN 159
++S S+P SST ++ S+
Sbjct: 287 SSTISSSSSSSSSPTSTSSTISSSSSSSS 315
Score = 27.1 bits (57), Expect = 3.6
Identities = 33/117 (28%), Positives = 57/117 (48%)
Frame = -3
Query: 509 PFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQ 330
P T+S +S + + S P++ SS F A+ P +++ S L+SS
Sbjct: 169 PLTSSTFSSLSSSTSSSQ-----PSVSSTSSSTFSSAA------PTSTSSSYLSSSSV-- 215
Query: 329 NLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTAGCFSN 159
++SSS PSS + TS ++ + P S ++S S+ + +SS+S TA S+
Sbjct: 216 -VSSSSSPSSSSSSTLTSSSLSTS--SIPSTSSSSSST-SSSLSSSSSSSTASSSSS 268
Score = 26.6 bits (56), Expect = 4.7
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -3
Query: 368 SAVSLLTSSPFPQNL---ASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVR 198
S+ S +SSP + +SSS PSS +TS S+ ++ S +TS +
Sbjct: 327 SSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSS 386
Query: 197 ASSTSRTAGCFSN 159
+SS+SR A S+
Sbjct: 387 SSSSSRPASSSSH 399
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 32.3 bits (70), Expect = 0.095
Identities = 32/109 (29%), Positives = 53/109 (48%)
Frame = -3
Query: 503 TNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNL 324
T++ IP G+ S+++ I PT+ +S S ++ +PP +++ + SSP P
Sbjct: 174 TSTSIPPTG--GSSSLSTPITPTVPPTSTS-----STSIPIPPTSTSSTDTNSSPLPTTS 226
Query: 323 ASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRT 177
S + +S T S+S T TP +TS S P+ +STS T
Sbjct: 227 TSCTTSTSIPTGGSSSLSTP----ITPTVPPTSTSSTSIPIPPTSTSST 271
Score = 31.9 bits (69), Expect = 0.13
Identities = 26/99 (26%), Positives = 45/99 (45%)
Frame = -3
Query: 470 GNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMT 291
G+ S+++ I PT+ +S S ++ +PP +++ + SSP P S + +S
Sbjct: 239 GSSSLSTPITPTVPPTSTS-----STSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTS--- 290
Query: 290 VESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTA 174
+ T T T P S +TS P SST ++
Sbjct: 291 IPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSS 329
Score = 29.9 bits (64), Expect = 0.51
Identities = 27/106 (25%), Positives = 48/106 (45%)
Frame = -3
Query: 503 TNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNL 324
T++ IP G+ S+++ I PT+ +S S ++ +PP +++ + S+P P
Sbjct: 117 TSTSIPPTG--GSSSLSTPITPTVPPTSTS-----STSIPIPPTSTSSTDTNSNPLPTTS 169
Query: 323 ASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASST 186
S + +S +S + T P S +TS P SST
Sbjct: 170 TSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSST 215
Score = 29.9 bits (64), Expect = 0.51
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = -3
Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPV 201
PP +++ + +SSP P S + +S + T T T P S +TS P
Sbjct: 318 PPASTSSTGTSSSPLPSTSTSCTTSTS---IPPTGNSTTPVTPTVPPTSTSSTSTPPPPA 374
Query: 200 RASSTSRTA 174
SST ++
Sbjct: 375 STSSTGTSS 383
Score = 29.5 bits (63), Expect = 0.67
Identities = 19/69 (27%), Positives = 37/69 (53%)
Frame = -3
Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPV 201
PP S S T+S F + + SS+P++ V++ S + + + T S ++S TP
Sbjct: 693 PPTTSFPSTFTTS-FITSSSLSSIPNNSTEVKTASTSSGTEIKTASTSSGSSSSSSYTPA 751
Query: 200 RASSTSRTA 174
++ST+ ++
Sbjct: 752 SSTSTTTSS 760
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = -3
Query: 383 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STP 204
+PP ++ + +T + P + ++ ++C T S T + V +TP + T+ S P
Sbjct: 399 IPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVP-YTSTPVTSTPLATTNCTTSTSVP 457
Query: 203 VRASSTSRTAGCFSNC 156
++ + T +NC
Sbjct: 458 YTSTPVTSTPLTTTNC 473
Score = 26.6 bits (56), Expect = 4.7
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -3
Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCM-TVESTSKQTQSAV*TTPGQSVGATSR*STP 204
P ++ S TS+ P SSS+ + TV TS T S P S +T S+P
Sbjct: 164 PLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTS--TSSTSIPIPPTSTSSTDTNSSP 221
Query: 203 VRASSTSRT 177
+ +STS T
Sbjct: 222 LPTTSTSCT 230
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 31.5 bits (68), Expect = 0.17
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = -3
Query: 377 PIASAVSLLTSSPFPQN-LASSSMPSSCMTV--ESTSKQTQSAV*TTPGQSVGATSR*ST 207
PI S+ +L TS+P + + +SS P + TV ST + +A+ T+P + ST
Sbjct: 1607 PITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSSTVVNSST 1666
Query: 206 PVRASSTSRTA 174
P+ +S+ T+
Sbjct: 1667 PITSSTVVNTS 1677
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = -3
Query: 326 LASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATS-R*STPVRASSTSRTA 174
L SSS+ ++ EST +T+S+ + P Q++ ++S STPV +S+S ++
Sbjct: 237 LESSSLTNTVSPTESTFYETKSSTSSVPTQTIDSSSFTSSTPVSLTSSSTSS 288
Score = 25.8 bits (54), Expect = 8.2
Identities = 29/112 (25%), Positives = 47/112 (41%)
Frame = -3
Query: 524 SSFV*PFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTS 345
SSF +S SL+ N + + +L SS S +++ +SA+S S
Sbjct: 534 SSFPTTIVSSSFQYSSLSSNVTTTNAQSSSLSSSNSSALTHISSSIVSSGSSSALS---S 590
Query: 344 SPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASS 189
S ++ SSS S + TT SVG T+ +TPV +++
Sbjct: 591 STIVSSINSSSSVFISSVSSSLQYSSSYVTETTTSGSVGFTTTIATPVGSTA 642
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 30.3 bits (65), Expect = 0.38
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRAS 192
+S+VS TSS +SSS PSS T +TS + S+ ++ S ++S S+ +S
Sbjct: 129 SSSVSSTTSS------SSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSS 182
Query: 191 STSRTAGCFSNCKEPS 144
S+S ++ S+ S
Sbjct: 183 SSSSSSSSSSSSSSSS 198
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/63 (28%), Positives = 35/63 (55%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRAS 192
+S+ + T+SP + +SSS SS + S+S + S+ ++ S ++S S+ +S
Sbjct: 145 SSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 204
Query: 191 STS 183
S+S
Sbjct: 205 SSS 207
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = -3
Query: 350 TSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTAG 171
+SSP + +++ PSS + S+S + S+ ++ S ++S S+ +SS+S ++
Sbjct: 141 SSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 200
Query: 170 CFSN 159
S+
Sbjct: 201 SSSS 204
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 29.1 bits (62), Expect = 0.88
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = -3
Query: 419 SSLFFKASWNVILPPIAS---AVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*T 249
SS ++ S ++I+P S +VS +SSP P + S + S + E T+ TQ T
Sbjct: 507 SSPYYSNS-SIIVPTTVSTSGSVSSFSSSPSPTSSFSGTSALSSSSNEETTTTTQVTYTT 565
Query: 248 TPGQSVGATSR*STPVRASSTSRTAGCFSNCKE 150
+P ++ + + R T T S E
Sbjct: 566 SPEETTTTMTTTTCSSRPEETISTVSTTSTVSE 598
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.1 bits (62), Expect = 0.88
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRA- 195
AS+ L + S A+S+ + +V ST+ + S+ T S ATS STP+ +
Sbjct: 319 ASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSV 378
Query: 194 SSTSRTA 174
+STS T+
Sbjct: 379 NSTSATS 385
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPV-RA 195
A++ S S A+S+ + +V ST+ + S+ T S ATS STP+ A
Sbjct: 335 ATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSA 394
Query: 194 SSTSRTA 174
+ST+ T+
Sbjct: 395 NSTTSTS 401
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPV-RA 195
A++ S S A+S+ + +V ST+ + S+ T S ATS STP+ A
Sbjct: 449 ATSASSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSA 508
Query: 194 SSTSRTA 174
+ST+ T+
Sbjct: 509 NSTTSTS 515
Score = 27.9 bits (59), Expect = 2.0
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = -3
Query: 407 FKASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVEST--SKQTQSAV*TTP-GQ 237
+ +S +L ++ + TSS +L SSS SS +T S+ S T S +P
Sbjct: 48 YLSSVPTLLKRATTSYNYNTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSS 107
Query: 236 SVGATSR*STPVRASSTSRTA 174
S+ ++S S+ + +SST+ ++
Sbjct: 108 SLTSSSATSSSLASSSTTSSS 128
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRAS 192
+S S ++SP +L SSS SS + ST+ + ++ T S+ ++S S+ + +S
Sbjct: 94 SSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSIT-SSSLASSSITSSSLASS 152
Query: 191 STSRTA 174
ST+ ++
Sbjct: 153 STTSSS 158
Score = 27.5 bits (58), Expect = 2.7
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRA- 195
A++ S S A+S+ + +V ST+ + S+ T S ATS STP+ +
Sbjct: 433 ATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSV 492
Query: 194 SSTSRTA 174
+STS T+
Sbjct: 493 NSTSATS 499
Score = 27.5 bits (58), Expect = 2.7
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STP---- 204
++A S TSS P + SS+ SS ST+ + S+ T S ATS STP
Sbjct: 518 STAPSYNTSSVLPTSSVSSTPLSSA---NSTTATSASSTPLTSVNSTTATSASSTPFGNS 574
Query: 203 VRASSTSRTAGCFSN 159
SS S + G F+N
Sbjct: 575 TITSSASGSTGEFTN 589
Score = 26.6 bits (56), Expect = 4.7
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRA- 195
AS+ L + + ASS+ SS + ST+ + S+ + S ATS STP+ +
Sbjct: 303 ASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSV 362
Query: 194 SSTSRTA 174
+ST+ T+
Sbjct: 363 NSTTATS 369
Score = 26.2 bits (55), Expect = 6.2
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = -3
Query: 386 ILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*ST 207
+LP + + + L+S+ ++SS P S +V ST+ + S+ + S ATS ST
Sbjct: 414 VLPTSSVSSTPLSSANSTTATSASSTPLS--SVNSTTATSASSTPLSSVNSTTATSASST 471
Query: 206 PVRA-SSTSRTA 174
P+ + +ST+ T+
Sbjct: 472 PLTSVNSTTATS 483
Score = 25.8 bits (54), Expect = 8.2
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNL-ASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRA 195
AS+ SL +SS +L +SSS+ SS +++ T S++ ++ S S +T
Sbjct: 70 ASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSL 129
Query: 194 SSTSRTAGCFSN 159
+S+S T+ ++
Sbjct: 130 ASSSITSSSLAS 141
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 26.2 bits (55), Expect = 6.2
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -3
Query: 332 QNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTAGCFSNCK 153
+ ASSS SS + S T S+ TP + ++S S+ +SS S ++ S+ +
Sbjct: 112 EGAASSSSSSSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSR 171
Query: 152 EPS 144
S
Sbjct: 172 SSS 174
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 8.2
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -3
Query: 377 PIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV--*TTPGQSVGATSR*STP 204
PI+S+++ SS +++SSS SS ++ S +T SA T G S TS S+
Sbjct: 166 PISSSITSSISSSASSSVSSSS-ASSSGSISSADAKTVSASSNSTISGFSTSTTSASSSA 224
Query: 203 VRASSTS 183
SS+S
Sbjct: 225 AGNSSSS 231
>SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 596
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -3
Query: 395 WNVILPPIASAVSLLTSSPF--PQN 327
WN++LP + +A+ ++ F PQN
Sbjct: 445 WNLVLPSVGAAIKIVVHGQFEEPQN 469
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,403,897
Number of Sequences: 5004
Number of extensions: 67531
Number of successful extensions: 275
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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