Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0253.Seq
(889 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y10275-1|CAA71318.1| 225|Homo sapiens L-3-phosphoserine phospha... 98 3e-20
BX537439-1|CAD97681.1| 225|Homo sapiens hypothetical protein pr... 98 3e-20
BC063614-1|AAH63614.1| 225|Homo sapiens phosphoserine phosphata... 98 3e-20
AK223508-1|BAD97228.1| 225|Homo sapiens phosphoserine phosphata... 98 3e-20
BT006661-1|AAP35307.1| 91|Homo sapiens phosphoserine phosphata... 37 0.11
AJ001612-1|CAA04865.1| 72|Homo sapiens L-3-phosphoserine-phosp... 37 0.11
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 36 0.15
AL590639-4|CAI14688.1| 1302|Homo sapiens ubiquitination factor E... 35 0.34
AL096841-1|CAI21859.1| 1302|Homo sapiens ubiquitination factor E... 35 0.34
AF043117-1|AAD02233.1| 1302|Homo sapiens ubiquitin-fusion degrad... 35 0.34
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 34 0.79
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 34 0.79
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 33 1.0
AF016693-1|AAB71686.1| 236|Homo sapiens small intestinal mucin ... 32 2.4
AF016694-1|AAB71687.1| 246|Homo sapiens small intestinal mucin ... 30 9.8
>Y10275-1|CAA71318.1| 225|Homo sapiens L-3-phosphoserine
phosphatase protein.
Length = 225
Score = 98.3 bits (234), Expect = 3e-20
Identities = 47/83 (56%), Positives = 60/83 (72%)
Frame = +1
Query: 256 TADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRPN 435
+AD VCFDVDSTVI++EGIDELAK CG D V +T AMGG + F+ AL +RL +I+P+
Sbjct: 13 SADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPS 72
Query: 436 VGQIREFIEKFPVRLTPGITELV 504
Q++ I + P LTPGI ELV
Sbjct: 73 REQVQRLIAEQPPHLTPGIRELV 95
Score = 91.9 bits (218), Expect = 3e-18
Identities = 47/106 (44%), Positives = 66/106 (62%)
Frame = +3
Query: 507 RLHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLQFYFHGEYAGFXXNEPTSRFW 686
RL ER V V+L+SGGFRS++E VA +LNIP N+FANRL+FYF+GEYAGF +PT+
Sbjct: 97 RLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESG 156
Query: 687 WPRVSGETTEGIARVPALVIXGDXATMPKAKPTC*XASLASGGNLV 824
+ + +++ GD AT +A P A + GGN++
Sbjct: 157 GKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPA-DAFIGFGGNVI 201
>BX537439-1|CAD97681.1| 225|Homo sapiens hypothetical protein
protein.
Length = 225
Score = 98.3 bits (234), Expect = 3e-20
Identities = 47/83 (56%), Positives = 60/83 (72%)
Frame = +1
Query: 256 TADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRPN 435
+AD VCFDVDSTVI++EGIDELAK CG D V +T AMGG + F+ AL +RL +I+P+
Sbjct: 13 SADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPS 72
Query: 436 VGQIREFIEKFPVRLTPGITELV 504
Q++ I + P LTPGI ELV
Sbjct: 73 REQVQRLIAEQPPHLTPGIRELV 95
Score = 91.9 bits (218), Expect = 3e-18
Identities = 47/106 (44%), Positives = 66/106 (62%)
Frame = +3
Query: 507 RLHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLQFYFHGEYAGFXXNEPTSRFW 686
RL ER V V+L+SGGFRS++E VA +LNIP N+FANRL+FYF+GEYAGF +PT+
Sbjct: 97 RLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESG 156
Query: 687 WPRVSGETTEGIARVPALVIXGDXATMPKAKPTC*XASLASGGNLV 824
+ + +++ GD AT +A P A + GGN++
Sbjct: 157 GKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPA-DAFIGFGGNVI 201
>BC063614-1|AAH63614.1| 225|Homo sapiens phosphoserine phosphatase
protein.
Length = 225
Score = 98.3 bits (234), Expect = 3e-20
Identities = 47/83 (56%), Positives = 60/83 (72%)
Frame = +1
Query: 256 TADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRPN 435
+AD VCFDVDSTVI++EGIDELAK CG D V +T AMGG + F+ AL +RL +I+P+
Sbjct: 13 SADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPS 72
Query: 436 VGQIREFIEKFPVRLTPGITELV 504
Q++ I + P LTPGI ELV
Sbjct: 73 REQVQRLIAEQPPHLTPGIRELV 95
Score = 91.9 bits (218), Expect = 3e-18
Identities = 47/106 (44%), Positives = 66/106 (62%)
Frame = +3
Query: 507 RLHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLQFYFHGEYAGFXXNEPTSRFW 686
RL ER V V+L+SGGFRS++E VA +LNIP N+FANRL+FYF+GEYAGF +PT+
Sbjct: 97 RLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESG 156
Query: 687 WPRVSGETTEGIARVPALVIXGDXATMPKAKPTC*XASLASGGNLV 824
+ + +++ GD AT +A P A + GGN++
Sbjct: 157 GKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPA-DAFIGFGGNVI 201
>AK223508-1|BAD97228.1| 225|Homo sapiens phosphoserine phosphatase
variant protein.
Length = 225
Score = 98.3 bits (234), Expect = 3e-20
Identities = 47/83 (56%), Positives = 60/83 (72%)
Frame = +1
Query: 256 TADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRPN 435
+AD VCFDVDSTVI++EGIDELAK CG D V +T AMGG + F+ AL +RL +I+P+
Sbjct: 13 SADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPS 72
Query: 436 VGQIREFIEKFPVRLTPGITELV 504
Q++ I + P LTPGI ELV
Sbjct: 73 REQVQRLIAEQPPHLTPGIRELV 95
Score = 88.6 bits (210), Expect = 3e-17
Identities = 46/106 (43%), Positives = 65/106 (61%)
Frame = +3
Query: 507 RLHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLQFYFHGEYAGFXXNEPTSRFW 686
RL ER V V+L+SGGFRS++E VA +LNIP N+FANRL+ YF+GEYAGF +PT+
Sbjct: 97 RLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKSYFNGEYAGFDETQPTAESG 156
Query: 687 WPRVSGETTEGIARVPALVIXGDXATMPKAKPTC*XASLASGGNLV 824
+ + +++ GD AT +A P A + GGN++
Sbjct: 157 GKGEVIKLLKEKFHFKKIIMIGDGATDMEACPPA-DAFIGFGGNVI 201
>BT006661-1|AAP35307.1| 91|Homo sapiens phosphoserine
phosphatase-like protein.
Length = 91
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 217 RDVAPTDCPGVVQTADCVCFDVDSTVIQDEGI 312
R ++ ++ + +AD VCFDVDSTVI +EGI
Sbjct: 24 RMISHSELRKLFYSADAVCFDVDSTVISEEGI 55
>AJ001612-1|CAA04865.1| 72|Homo sapiens
L-3-phosphoserine-phosphatase homologue protein.
Length = 72
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 217 RDVAPTDCPGVVQTADCVCFDVDSTVIQDEGI 312
R ++ ++ + +AD VCFDVDSTVI +EGI
Sbjct: 24 RMISHSELRKLFYSADAVCFDVDSTVISEEGI 55
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 36.3 bits (80), Expect = 0.15
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRAS 192
+S+ S SS P + SSS PSS + S S + S+ ++P S ++S S+ +S
Sbjct: 62 SSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSS 121
Query: 191 STSRTAGCFSNCKEPS 144
S+S ++ S+ PS
Sbjct: 122 SSSSSSSPSSSSSSPS 137
Score = 35.5 bits (78), Expect = 0.26
Identities = 23/78 (29%), Positives = 41/78 (52%)
Frame = -3
Query: 377 PIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVR 198
P +S+ S +SSP N +SSS SS + S+S + S+ ++P S ++S +
Sbjct: 92 PSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSS 151
Query: 197 ASSTSRTAGCFSNCKEPS 144
+S +S ++ S+ PS
Sbjct: 152 SSPSSSSSSSSSSSSSPS 169
Score = 31.5 bits (68), Expect = 4.2
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*S-TPVRA 195
+S+ S +SSP + +SSS PSS + S+S + S+ ++P S ++S S + +
Sbjct: 126 SSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNS 185
Query: 194 SSTSRTAGCFSNCKEPS 144
S +S ++ S+ PS
Sbjct: 186 SPSSSSSSPSSSSSSPS 202
>AL590639-4|CAI14688.1| 1302|Homo sapiens ubiquitination factor E4B
(UFD2 homolog, yeast) protein.
Length = 1302
Score = 35.1 bits (77), Expect = 0.34
Identities = 27/79 (34%), Positives = 39/79 (49%)
Frame = -3
Query: 395 WNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR 216
+ V P +S VS+L+SSP P LASS + S+ ++ S P S ATSR
Sbjct: 333 YTVTHPWASSGVSILSSSPSPPALASS---PQAVPASSSRQRPSSTGPPLPPASPSATSR 389
Query: 215 *STPVRASSTSRTAGCFSN 159
+ +R S + +G SN
Sbjct: 390 RPSSLRISPSLGASGGASN 408
>AL096841-1|CAI21859.1| 1302|Homo sapiens ubiquitination factor E4B
(UFD2 homolog, yeast) protein.
Length = 1302
Score = 35.1 bits (77), Expect = 0.34
Identities = 27/79 (34%), Positives = 39/79 (49%)
Frame = -3
Query: 395 WNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR 216
+ V P +S VS+L+SSP P LASS + S+ ++ S P S ATSR
Sbjct: 333 YTVTHPWASSGVSILSSSPSPPALASS---PQAVPASSSRQRPSSTGPPLPPASPSATSR 389
Query: 215 *STPVRASSTSRTAGCFSN 159
+ +R S + +G SN
Sbjct: 390 RPSSLRISPSLGASGGASN 408
>AF043117-1|AAD02233.1| 1302|Homo sapiens ubiquitin-fusion
degradation protein 2 protein.
Length = 1302
Score = 35.1 bits (77), Expect = 0.34
Identities = 27/79 (34%), Positives = 39/79 (49%)
Frame = -3
Query: 395 WNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR 216
+ V P +S VS+L+SSP P LASS + S+ ++ S P S ATSR
Sbjct: 333 YTVTHPWASSGVSILSSSPSPPALASS---PQAVPASSSRQRPSSTGPPLPPASPSATSR 389
Query: 215 *STPVRASSTSRTAGCFSN 159
+ +R S + +G SN
Sbjct: 390 RPSSLRISPSLGASGGASN 408
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 33.9 bits (74), Expect = 0.79
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = -3
Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR-*STP 204
PP A S+ TS+P + +SMP S TV S+ T S V S+ S+P
Sbjct: 3263 PPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPADTSTPVTTYSQASSSP 3322
Query: 203 VRASSTSRTAGCFSNCKEP 147
A TS +S P
Sbjct: 3323 PIADGTSMPTSTYSEGSTP 3341
Score = 32.3 bits (70), Expect = 2.4
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = -3
Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVEST---SKQTQSAV*TTPGQSVGATSR*S 210
P A S+ S+P + A +S+P S TV S+ S T AV +TP + S S
Sbjct: 1496 PTPAEGTSIAISTPSEGSTALTSIPVSTTTVASSEINSLSTTPAVTSTPVTTYSQAS--S 1553
Query: 209 TPVRASSTSRTAGCFSNCKEP 147
+P A TS +S P
Sbjct: 1554 SPTTADGTSMQTSTYSEGSTP 1574
Score = 30.7 bits (66), Expect = 7.4
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = -3
Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQS---AV*TTPGQSVGATSR*S 210
P A S+ TS+P + A +S+P S TV S+ T S AV +TP + S S
Sbjct: 1849 PTPAEGTSIATSTPSEGSTALTSIPVSTTTVASSETNTLSTTPAVTSTPVTTYAQVS--S 1906
Query: 209 TPVRASSTS 183
+P A +S
Sbjct: 1907 SPTTADGSS 1915
Score = 30.3 bits (65), Expect = 9.8
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = -3
Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPV 201
PP A S+ TS+P + + MP S V S+ T S TTP + ++ +T
Sbjct: 1024 PPTAEGTSMPTSTPSEGSTPLTRMPVSTTMVASSETSTLS---TTPADT---STPVTTYS 1077
Query: 200 RASSTSRTA 174
+ASS+S TA
Sbjct: 1078 QASSSSTTA 1086
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 33.9 bits (74), Expect = 0.79
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = -3
Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR-*STP 204
PP A S+ TS+P + +SMP S TV S+ T S V S+ S+P
Sbjct: 3263 PPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPADTSTPVTTYSQASSSP 3322
Query: 203 VRASSTSRTAGCFSNCKEP 147
A TS +S P
Sbjct: 3323 PIADGTSMPTSTYSEGSTP 3341
Score = 32.3 bits (70), Expect = 2.4
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = -3
Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVEST---SKQTQSAV*TTPGQSVGATSR*S 210
P A S+ S+P + A +S+P S TV S+ S T AV +TP + S S
Sbjct: 1496 PTPAEGTSIAISTPSEGSTALTSIPVSTTTVASSEINSLSTTPAVTSTPVTTYSQAS--S 1553
Query: 209 TPVRASSTSRTAGCFSNCKEP 147
+P A TS +S P
Sbjct: 1554 SPTTADGTSMQTSTYSEGSTP 1574
Score = 30.7 bits (66), Expect = 7.4
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = -3
Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQS---AV*TTPGQSVGATSR*S 210
P A S+ TS+P + A +S+P S TV S+ T S AV +TP + S S
Sbjct: 1849 PTPAEGTSIATSTPSEGSTALTSIPVSTTTVASSETNTLSTTPAVTSTPVTTYAQVS--S 1906
Query: 209 TPVRASSTS 183
+P A +S
Sbjct: 1907 SPTTADGSS 1915
Score = 30.3 bits (65), Expect = 9.8
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = -3
Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPV 201
PP A S+ TS+P + + MP S V S+ T S TTP + ++ +T
Sbjct: 1024 PPTAEGTSMPTSTPSEGSTPLTRMPVSTTMVASSETSTLS---TTPADT---STPVTTYS 1077
Query: 200 RASSTSRTA 174
+ASS+S TA
Sbjct: 1078 QASSSSTTA 1086
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRAS 192
+S+ S SS P + SSS PSS + S S + S+ ++P S ++S S+ +S
Sbjct: 62 SSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSS-SSPSSSNSSSSSSSSSPSSS 120
Query: 191 STSRTAGCFSNCKEPS 144
S+S ++ S+ PS
Sbjct: 121 SSSSSSSPSSSSSSPS 136
Score = 33.5 bits (73), Expect = 1.0
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRAS 192
+S+ S +SSP N +SSS SS + S+S + S+ ++P S ++S + +S
Sbjct: 93 SSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSS 152
Query: 191 STSRTAGCFSNCKEPS 144
+S ++ S+ PS
Sbjct: 153 PSSSSSSSSSSSSSPS 168
Score = 31.5 bits (68), Expect = 4.2
Identities = 23/69 (33%), Positives = 39/69 (56%)
Frame = -3
Query: 350 TSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTAG 171
TSSP + +SSS PSS + S+S + S+ ++ S ++S S+P +SS+S ++
Sbjct: 89 TSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSS--SSPSSSSSSSSSSP 146
Query: 170 CFSNCKEPS 144
S+ PS
Sbjct: 147 S-SSSSSPS 154
Score = 31.5 bits (68), Expect = 4.2
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*S-TPVRA 195
+S+ S +SSP + +SSS PSS + S+S + S+ ++P S ++S S + +
Sbjct: 125 SSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNS 184
Query: 194 SSTSRTAGCFSNCKEPS 144
S +S ++ S+ PS
Sbjct: 185 SPSSSSSSPSSSSSSPS 201
>AF016693-1|AAB71686.1| 236|Homo sapiens small intestinal mucin
MUC3 protein.
Length = 236
Score = 32.3 bits (70), Expect = 2.4
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = -3
Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVEST---SKQTQSAV*TTPGQSVGATSR*S 210
P A S+ S+P + A +S+P S TV S+ S T AV +TP + S S
Sbjct: 150 PTPAEGTSIAISTPSEGSTALTSIPVSTTTVASSEINSLSTTPAVTSTPVTTYSQAS--S 207
Query: 209 TPVRASSTSRTAGCFSNCKEP 147
+P A TS +S P
Sbjct: 208 SPTTADGTSMQTSTYSEGSTP 228
>AF016694-1|AAB71687.1| 246|Homo sapiens small intestinal mucin
MUC3 protein.
Length = 246
Score = 30.3 bits (65), Expect = 9.8
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -3
Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR-*STP 204
PP A S+ TS+P + + MP S V S+ T S V S+ S+P
Sbjct: 22 PPTAEGTSMPTSTPSEGSTPLTRMPVSTTMVASSETSTLSTTPADTSTPVTTYSQASSSP 81
Query: 203 VRASSTSRTAGCFSNCKEP 147
A TS +S P
Sbjct: 82 TTADGTSMPTSTYSEGGTP 100
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,904,868
Number of Sequences: 237096
Number of extensions: 2521497
Number of successful extensions: 5890
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5840
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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