Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0253.Seq
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical... 93 3e-19
AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical ... 93 3e-19
AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical... 87 1e-17
AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical... 87 1e-17
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 33 0.27
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 33 0.27
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 33 0.27
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 31 1.1
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 31 1.1
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 31 1.1
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 30 2.5
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 3.4
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 4.4
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 5.9
Z92790-3|CAB07228.1| 383|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 28 7.8
U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family ... 28 7.8
>AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical
protein Y62E10A.13b protein.
Length = 279
Score = 92.7 bits (220), Expect = 3e-19
Identities = 45/86 (52%), Positives = 58/86 (67%)
Frame = +1
Query: 247 VVQTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDII 426
V + AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F++AL RL ++
Sbjct: 52 VWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRDALAARLQVM 111
Query: 427 RPNVGQIREFIEKFPVRLTPGITELV 504
+PN Q+ +F+ +LT GI ELV
Sbjct: 112 KPNHEQLEQFVNISKPKLTVGIRELV 137
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/110 (40%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Frame = +3
Query: 507 RLHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLQFYFHGEYAGFXXNEPTSRFW 686
RLH RG VYLVSGGFR LI PVAE L I I+AN + F G+Y GF +E TS
Sbjct: 139 RLHARGTHVYLVSGGFRRLILPVAELLGIEKSRIYANEILFDKFGKYHGFDTSELTSDSG 198
Query: 687 WPRVSGETTEGIAR----VPALVIXGDXATMPKAKPTC*XASLASGGNLV 824
+ + +V+ GD AT +A P A + GGN++
Sbjct: 199 SKETGKPAVIALLKKMYNYKTVVMVGDGATDVEASPPA-DAFIGFGGNVI 247
>AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical
protein Y62E10A.13a protein.
Length = 276
Score = 92.7 bits (220), Expect = 3e-19
Identities = 45/86 (52%), Positives = 58/86 (67%)
Frame = +1
Query: 247 VVQTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDII 426
V + AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F++AL RL ++
Sbjct: 49 VWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRDALAARLQVM 108
Query: 427 RPNVGQIREFIEKFPVRLTPGITELV 504
+PN Q+ +F+ +LT GI ELV
Sbjct: 109 KPNHEQLEQFVNISKPKLTVGIRELV 134
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/110 (40%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Frame = +3
Query: 507 RLHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLQFYFHGEYAGFXXNEPTSRFW 686
RLH RG VYLVSGGFR LI PVAE L I I+AN + F G+Y GF +E TS
Sbjct: 136 RLHARGTHVYLVSGGFRRLILPVAELLGIEKSRIYANEILFDKFGKYHGFDTSELTSDSG 195
Query: 687 WPRVSGETTEGIAR----VPALVIXGDXATMPKAKPTC*XASLASGGNLV 824
+ + +V+ GD AT +A P A + GGN++
Sbjct: 196 SKETGKPAVIALLKKMYNYKTVVMVGDGATDVEASPPA-DAFIGFGGNVI 244
>AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical
protein Y62E10A.13d protein.
Length = 282
Score = 87.4 bits (207), Expect = 1e-17
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Frame = +1
Query: 247 VVQTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTF--QEALKKRLD 420
V + AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F ++AL RL
Sbjct: 53 VWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRYRDALAARLQ 112
Query: 421 IIRPNVGQIREFIEKFPVRLTPGITELV 504
+++PN Q+ +F+ +LT GI ELV
Sbjct: 113 VMKPNHEQLEQFVNISKPKLTVGIRELV 140
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/110 (40%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Frame = +3
Query: 507 RLHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLQFYFHGEYAGFXXNEPTSRFW 686
RLH RG VYLVSGGFR LI PVAE L I I+AN + F G+Y GF +E TS
Sbjct: 142 RLHARGTHVYLVSGGFRRLILPVAELLGIEKSRIYANEILFDKFGKYHGFDTSELTSDSG 201
Query: 687 WPRVSGETTEGIAR----VPALVIXGDXATMPKAKPTC*XASLASGGNLV 824
+ + +V+ GD AT +A P A + GGN++
Sbjct: 202 SKETGKPAVIALLKKMYNYKTVVMVGDGATDVEASPPA-DAFIGFGGNVI 250
>AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical
protein Y62E10A.13c protein.
Length = 265
Score = 87.4 bits (207), Expect = 1e-17
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Frame = +1
Query: 247 VVQTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTF--QEALKKRLD 420
V + AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F ++AL RL
Sbjct: 36 VWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRYRDALAARLQ 95
Query: 421 IIRPNVGQIREFIEKFPVRLTPGITELV 504
+++PN Q+ +F+ +LT GI ELV
Sbjct: 96 VMKPNHEQLEQFVNISKPKLTVGIRELV 123
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/110 (40%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Frame = +3
Query: 507 RLHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLQFYFHGEYAGFXXNEPTSRFW 686
RLH RG VYLVSGGFR LI PVAE L I I+AN + F G+Y GF +E TS
Sbjct: 125 RLHARGTHVYLVSGGFRRLILPVAELLGIEKSRIYANEILFDKFGKYHGFDTSELTSDSG 184
Query: 687 WPRVSGETTEGIAR----VPALVIXGDXATMPKAKPTC*XASLASGGNLV 824
+ + +V+ GD AT +A P A + GGN++
Sbjct: 185 SKETGKPAVIALLKKMYNYKTVVMVGDGATDVEASPPA-DAFIGFGGNVI 233
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = -3
Query: 383 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STP 204
L P S +S LTS P P + SS S+ T Q+ S++ ++ + ++ T
Sbjct: 482 LSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTT 541
Query: 203 VRASSTSRTAGCFSNCKEPS 144
+ + S S + G P+
Sbjct: 542 MTSPSQSSSVGSSQGSTSPA 561
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -3
Query: 380 PPIASAVSLLTSS-PFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STP 204
P + S+ ++ +SS FP ++ASS PS TV STS S+ T G+T TP
Sbjct: 64 PVVLSSSTIQSSSGTFPSSVASS--PS---TVGSTSGAASSSSYATVSTIAGSTGSTITP 118
Query: 203 VRASSTS 183
V SS++
Sbjct: 119 VPGSSST 125
Score = 28.3 bits (60), Expect = 7.8
Identities = 34/120 (28%), Positives = 52/120 (43%)
Frame = -3
Query: 503 TNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNL 324
T +++PG S + S S P+ MS++ V + P +S +SSP P
Sbjct: 275 TATIVPGSSSSVGSSTQSAS-PSSPGTMSTVSGPTGSTVTVVPGSSTSPAPSSSPNP--- 330
Query: 323 ASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTAGCFSNCKEPS 144
SS P+S + + S + V T G +V ++ S ASST+ T G S S
Sbjct: 331 --SSSPASTGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTA-TPGSSSTVPSSS 387
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = -3
Query: 377 PIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVR 198
P S+ S +T P+ +SS S + S + + S G S+G S S+P
Sbjct: 424 PTGSSQSTIT----PEGSTASSPTGSTGSTFSVATEVTSQSTVPSGSSLGTQSTNSSPSP 479
Query: 197 ASSTSRTAGCFSNCKEPS 144
+S + T+G + EPS
Sbjct: 480 SSLSPSTSGMSTLTSEPS 497
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = -3
Query: 383 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STP 204
L P S +S LTS P P + SS S+ T Q+ S++ ++ + ++ T
Sbjct: 689 LSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTT 748
Query: 203 VRASSTSRTAGCFSNCKEPS 144
+ + S S + G P+
Sbjct: 749 MTSPSQSSSVGSSQGSTSPA 768
Score = 29.9 bits (64), Expect = 2.5
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Frame = -3
Query: 536 IYDDSSFV*PFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVS 357
I +D + V T + P ++T S+ + P + +S AS + P A++ +
Sbjct: 210 ITNDINNVLNITAATSPSTAVTSPSSLGTSSSPLPSSISTSALPIASSSASSSPSAASST 269
Query: 356 ---LLTSSPFPQNLAS--SSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRAS 192
+L+SS + + SS+ SS TV STS S+ T G+T TPV S
Sbjct: 270 TPVVLSSSTIQSSSGTFPSSVASSPSTVGSTSGAASSSSYATVSTIAGSTGSTITPVPGS 329
Query: 191 STS 183
S++
Sbjct: 330 SST 332
Score = 28.3 bits (60), Expect = 7.8
Identities = 34/120 (28%), Positives = 52/120 (43%)
Frame = -3
Query: 503 TNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNL 324
T +++PG S + S S P+ MS++ V + P +S +SSP P
Sbjct: 482 TATIVPGSSSSVGSSTQSAS-PSSPGTMSTVSGPTGSTVTVVPGSSTSPAPSSSPNP--- 537
Query: 323 ASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTAGCFSNCKEPS 144
SS P+S + + S + V T G +V ++ S ASST+ T G S S
Sbjct: 538 --SSSPASTGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTA-TPGSSSTVPSSS 594
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = -3
Query: 377 PIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVR 198
P S+ S +T P+ +SS S + S + + S G S+G S S+P
Sbjct: 631 PTGSSQSTIT----PEGSTASSPTGSTGSTFSVATEVTSQSTVPSGSSLGTQSTNSSPSP 686
Query: 197 ASSTSRTAGCFSNCKEPS 144
+S + T+G + EPS
Sbjct: 687 SSLSPSTSGMSTLTSEPS 704
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = -3
Query: 383 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STP 204
L P S +S LTS P P + SS S+ T Q+ S++ ++ + ++ T
Sbjct: 689 LSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTT 748
Query: 203 VRASSTSRTAGCFSNCKEPS 144
+ + S S + G P+
Sbjct: 749 MTSPSQSSSVGSSQGSTSPA 768
Score = 29.9 bits (64), Expect = 2.5
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Frame = -3
Query: 536 IYDDSSFV*PFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVS 357
I +D + V T + P ++T S+ + P + +S AS + P A++ +
Sbjct: 210 ITNDINNVLNITAATSPSTAVTSPSSLGTSSSPLPSSISTSALPIASSSASSSPSAASST 269
Query: 356 ---LLTSSPFPQNLAS--SSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRAS 192
+L+SS + + SS+ SS TV STS S+ T G+T TPV S
Sbjct: 270 TPVVLSSSTIQSSSGTFPSSVASSPSTVGSTSGAASSSSYATVSTIAGSTGSTITPVPGS 329
Query: 191 STS 183
S++
Sbjct: 330 SST 332
Score = 28.7 bits (61), Expect = 5.9
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = -3
Query: 368 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASS 189
S V+ T+SP ASS+ PSS T+ STS T + + + A+S+ + V S
Sbjct: 1500 STVASSTASP----AASSTAPSSTGTMSSTSSGTVGSTISESSTTASASSQTGSTVTMGS 1555
Query: 188 TSRTAG 171
+S T+G
Sbjct: 1556 SS-TSG 1560
Score = 28.3 bits (60), Expect = 7.8
Identities = 34/120 (28%), Positives = 52/120 (43%)
Frame = -3
Query: 503 TNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNL 324
T +++PG S + S S P+ MS++ V + P +S +SSP P
Sbjct: 482 TATIVPGSSSSVGSSTQSAS-PSSPGTMSTVSGPTGSTVTVVPGSSTSPAPSSSPNP--- 537
Query: 323 ASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTAGCFSNCKEPS 144
SS P+S + + S + V T G +V ++ S ASST+ T G S S
Sbjct: 538 --SSSPASTGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTA-TPGSSSTVPSSS 594
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = -3
Query: 377 PIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVR 198
P S+ S +T P+ +SS S + S + + S G S+G S S+P
Sbjct: 631 PTGSSQSTIT----PEGSTASSPTGSTGSTFSVATEVTSQSTVPSGSSLGTQSTNSSPSP 686
Query: 197 ASSTSRTAGCFSNCKEPS 144
+S + T+G + EPS
Sbjct: 687 SSLSPSTSGMSTLTSEPS 704
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = -3
Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRAS 192
+SA S + SS ASS+ PSS T+ STS T + + + TS + V
Sbjct: 1745 SSAGSTVVSST-ASPAASSTAPSSTGTMSSTSSGTVGSTMSQSSTAASTTSHTGSTVTLG 1803
Query: 191 STSRTAGCFSNCKEPS 144
S+S ++ S + S
Sbjct: 1804 SSSTSSNQMSTSQGSS 1819
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -3
Query: 359 SLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTS 183
++ T++P P +S+ S+ V +TS T + TTP T+ +T +STS
Sbjct: 436 TIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTSTTTEPTTTTYTTSTS 494
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -3
Query: 374 IASAVSLLTSSPFPQNLASS--SMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPV 201
+ SA S+L++S P S S+P S + T + TTP S GA S STP+
Sbjct: 727 VTSASSILSNSSSPHQPTPSLCSLPESSSLHSIPTAMTSLSTTTTPTHSQGAPST-STPI 785
Query: 200 RASSTS 183
S S
Sbjct: 786 GGSGNS 791
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -3
Query: 374 IASAVSLLTSSPFPQNLASS--SMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPV 201
+ SA S+L++S P S S+P S + T + TTP S GA S STP+
Sbjct: 727 VTSASSILSNSSSPHQPTPSLCSLPESSSLHSIPTAMTSLSTTTTPTHSQGAPST-STPI 785
Query: 200 RASSTS 183
S S
Sbjct: 786 GGSGNS 791
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = -3
Query: 377 PIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVR 198
P + AVS T++P P N + ++P + + + V + + GA S +T
Sbjct: 2228 PTSGAVSSTTNTPSPTNQSPVTLPPPSVATAGPTGPILTVVPVSSAPTSGAVSSTATAAP 2287
Query: 197 ASSTSRTAGCFS 162
+T++T+ S
Sbjct: 2288 VITTTKTSSVLS 2299
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 353 LTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATS-R*STPVRASSTSRT 177
+TS+ P +++P++ T STS T S TTP S T+ ST +S+TS T
Sbjct: 268 VTSTTVPTTTVVTTVPTT--TATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPT 325
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = -3
Query: 395 WNVILPPIASAVSLLTSSPFPQNLA--SSSMPSSCMTVESTSKQTQSAV*TTPGQSVGAT 222
WN P ++ + TSS ++ + SS+ SS +T +T++ T + + TTP + A+
Sbjct: 196 WNYDPPTASTTEEIDTSSSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTTIAS 255
Query: 221 SR*STPVRASST 186
+ T + S+T
Sbjct: 256 TSTVTSIVTSTT 267
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 353 LTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATS-R*STPVRASSTSRT 177
+TS+ P +++P++ T STS T S TTP S T+ ST +S+TS T
Sbjct: 250 VTSTTVPTTTVVTTVPTT--TATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPT 307
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = -3
Query: 395 WNVILPPIASAVSLLTSSPFPQNLA--SSSMPSSCMTVESTSKQTQSAV*TTPGQSVGAT 222
WN P ++ + TSS ++ + SS+ SS +T +T++ T + + TTP + A+
Sbjct: 178 WNYDPPTASTTEEIDTSSSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTTIAS 237
Query: 221 SR*STPVRASST 186
+ T + S+T
Sbjct: 238 TSTVTSIVTSTT 249
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -3
Query: 383 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTS-KQTQSAV*TTPGQSVGATSR*ST 207
+PP S S T P S+ P+S T +T+ K T S +T + TS +T
Sbjct: 583 VPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
Query: 206 PVRASSTSRTA 174
+T+ T+
Sbjct: 643 TTPQPTTTTTS 653
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -3
Query: 383 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTS-KQTQSAV*TTPGQSVGATSR*ST 207
+PP S S T P S+ P+S T +T+ K T S +T + TS +T
Sbjct: 583 VPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
Query: 206 PVRASSTSRTA 174
+T+ T+
Sbjct: 643 TTPQPTTTTTS 653
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -3
Query: 368 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASS 189
+ V TS+ S+S PS+ T+ESTS T ++ +T S T + S+ + +S
Sbjct: 294 TTVPTSTSTVTTAMSTSTSTPSTSTTIESTS-TTFTSTASTSTSSTSTTQQSSSTITSSP 352
Query: 188 TSRT 177
+S T
Sbjct: 353 SSTT 356
Score = 28.7 bits (61), Expect = 5.9
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -3
Query: 401 ASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGAT 222
AS + P ++ + ++SP + SSS S+ +T ++++ T ++ +T S A
Sbjct: 437 ASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAP 496
Query: 221 SR*ST-PVRASST-SRTA 174
S +T P +SST S TA
Sbjct: 497 STSTTGPSSSSSTPSSTA 514
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -3
Query: 368 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASS 189
+ V TS+ S+S PS+ T+ESTS T ++ +T S T + S+ + +S
Sbjct: 294 TTVPTSTSTVTTAMSTSTSTPSTSTTIESTS-TTFTSTASTSTSSTSTTQQSSSTITSSP 352
Query: 188 TSRT 177
+S T
Sbjct: 353 SSTT 356
Score = 28.7 bits (61), Expect = 5.9
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -3
Query: 401 ASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGAT 222
AS + P ++ + ++SP + SSS S+ +T ++++ T ++ +T S A
Sbjct: 437 ASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAP 496
Query: 221 SR*ST-PVRASST-SRTA 174
S +T P +SST S TA
Sbjct: 497 STSTTGPSSSSSTPSSTA 514
>Z92790-3|CAB07228.1| 383|Caenorhabditis elegans Hypothetical
protein H03G16.4 protein.
Length = 383
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 139 NRDGSLQFEKQPAVRDVEDALTGVDQRDVAPTDCPGVVQTA--DCVCFDVDSTVIQDEGI 312
NRDGS + R E +TG D ++A D +++ + D V ++D Q+
Sbjct: 141 NRDGSCYVQCDTGARGDEKEVTGGDHLEMAVNDFCNMIKGSKHDLVKVELD---FQNCSP 197
Query: 313 DELAKFC 333
DE KFC
Sbjct: 198 DEHDKFC 204
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = -3
Query: 383 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STP 204
+P S S+ T P++ +S +S ES K+T S TTP T
Sbjct: 35 MPAFQSIASISTDRESPEDPGNSGYLAS--GAESGPKKTTSKPATTPTPEPTTTPVEEEK 92
Query: 203 VRASSTSRTAGCFSN-CKEP 147
V+ S +S T F N +EP
Sbjct: 93 VKVSPSSSTKESFENSAREP 112
>U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family
protein 1 protein.
Length = 652
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 343 DEVKRLTAEAMGGNMTFQEALKKRLDIIRPN 435
D+VK +T E M GNM + RLD+ P+
Sbjct: 385 DDVKMITGEEMKGNMADFSDILTRLDLAPPS 415
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,793,078
Number of Sequences: 27780
Number of extensions: 375984
Number of successful extensions: 1231
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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