Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0250.Seq
         (460 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118770-1|AAM50630.1|  390|Drosophila melanogaster GH11073p pro...    29   4.0  
AE014297-4645|AAF57072.2|  390|Drosophila melanogaster CG2267-PA...    29   4.0  
DQ138896-1|ABA86502.1| 1309|Drosophila melanogaster CG18265 prot...    27   9.2  
BT011387-1|AAR96179.1| 1322|Drosophila melanogaster GH10077p pro...    27   9.2  
AE014298-2442|AAS65389.1| 1387|Drosophila melanogaster CG18572-P...    27   9.2  
AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-P...    27   9.2  
AE014296-2912|AAF49339.1| 1322|Drosophila melanogaster CG18265-P...    27   9.2  

>AY118770-1|AAM50630.1|  390|Drosophila melanogaster GH11073p
           protein.
          Length = 390

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 363 PRQERKSSTD-YSEPRHRTELYPDFGAVMHVLRKKPIDRSPRSKW 232
           P+ E+   T+   EP HR+   PD   + H L ++ + + P+S++
Sbjct: 164 PKAEKPKPTENVLEPLHRSSTSPDLSKLHHQLWRRDLMQIPKSQF 208


>AE014297-4645|AAF57072.2|  390|Drosophila melanogaster CG2267-PA
           protein.
          Length = 390

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 363 PRQERKSSTD-YSEPRHRTELYPDFGAVMHVLRKKPIDRSPRSKW 232
           P+ E+   T+   EP HR+   PD   + H L ++ + + P+S++
Sbjct: 164 PKAEKPKPTENVLEPLHRSSTSPDLSKLHHQLWRRDLMQIPKSQF 208


>DQ138896-1|ABA86502.1| 1309|Drosophila melanogaster CG18265 protein.
          Length = 1309

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/56 (30%), Positives = 21/56 (37%)
 Frame = -3

Query: 239  PNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPAD 72
            PNGL                 C E  +  G   S + PD A  A  ++AF   PAD
Sbjct: 1227 PNGLGSATGGHRSAATSPFEGCGELANGIGKPASYAQPDGAEEAYQMQAFHLQPAD 1282


>BT011387-1|AAR96179.1| 1322|Drosophila melanogaster GH10077p protein.
          Length = 1322

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/56 (30%), Positives = 21/56 (37%)
 Frame = -3

Query: 239  PNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPAD 72
            PNGL                 C E  +  G   S + PD A  A  ++AF   PAD
Sbjct: 1234 PNGLGSATGGHRSAATSPFEGCGELANGIGKPASYAQPDGAEEAYQMQAFHLQPAD 1289


>AE014298-2442|AAS65389.1| 1387|Drosophila melanogaster CG18572-PB,
           isoform B protein.
          Length = 1387

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = -3

Query: 242 DPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARL 111
           +PNG   R++  +C  +L +  CL     RG++V++ LP SARL
Sbjct: 188 NPNGKGPRIAILDCGLKLNQLRCLL---QRGASVTL-LPWSARL 227


>AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-PA,
           isoform A protein.
          Length = 2224

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = -3

Query: 242 DPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARL 111
           +PNG   R++  +C  +L +  CL     RG++V++ LP SARL
Sbjct: 188 NPNGKGPRIAILDCGLKLNQLRCLL---QRGASVTL-LPWSARL 227


>AE014296-2912|AAF49339.1| 1322|Drosophila melanogaster CG18265-PA
            protein.
          Length = 1322

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/56 (30%), Positives = 21/56 (37%)
 Frame = -3

Query: 239  PNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPAD 72
            PNGL                 C E  +  G   S + PD A  A  ++AF   PAD
Sbjct: 1234 PNGLGSATGGHRSAATSPFEGCGELANGIGKPASYAQPDGAEEAYQMQAFHLQPAD 1289


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,028,897
Number of Sequences: 53049
Number of extensions: 376828
Number of successful extensions: 1025
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)