Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0245.Seq
         (906 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    75   3e-12
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    74   4e-12
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    73   1e-11
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    69   2e-10
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    64   6e-09
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:...    49   1e-04
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ...    39   0.15 
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j...    37   0.62 
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    37   0.81 
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba...    35   3.3  

>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 74.9 bits (176), Expect = 3e-12
 Identities = 39/67 (58%), Positives = 42/67 (62%)
 Frame = +3

Query: 381 GGAXYPIRPIVSRITISLAVVLQRRDWGNPGGTXLNRLAAHPPXPAGRNSEEGRTDLXFP 560
           G   YP+   +S     LAVVLQRRDW NPG T LNRLAAHPP  + RNSEE RTD    
Sbjct: 51  GELWYPLVKALSESYYGLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQ 110

Query: 561 TXAXLNG 581
               LNG
Sbjct: 111 QLRXLNG 117


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 74.1 bits (174), Expect = 4e-12
 Identities = 37/57 (64%), Positives = 40/57 (70%)
 Frame = +3

Query: 411 VSRITISLAVVLQRRDWGNPGGTXLNRLAAHPPXPAGRNSEEGRTDLXFPTXAXLNG 581
           ++ IT SLAVVLQRRDW NPG T LNRLAAHPP  + RNSEE RTD        LNG
Sbjct: 1   MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNG 57


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 72.9 bits (171), Expect = 1e-11
 Identities = 35/62 (56%), Positives = 40/62 (64%)
 Frame = +3

Query: 396 PIRPIVSRITISLAVVLQRRDWGNPGGTXLNRLAAHPPXPAGRNSEEGRTDLXFPTXAXL 575
           P+       +++LAVVLQRRDW NPG T LNRLAAHPP  + RNSEE RTD        L
Sbjct: 14  PLESTCRHASLALAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSL 73

Query: 576 NG 581
           NG
Sbjct: 74  NG 75


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 68.9 bits (161), Expect = 2e-10
 Identities = 32/40 (80%), Positives = 33/40 (82%)
 Frame = +3

Query: 429 SLAVVLQRRDWGNPGGTXLNRLAAHPPXPAGRNSEEGRTD 548
           SLAVVLQRRDW NPG T LNRLAAHPP  + RNSEE RTD
Sbjct: 21  SLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTD 60


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 63.7 bits (148), Expect = 6e-09
 Identities = 30/48 (62%), Positives = 35/48 (72%)
 Frame = +1

Query: 427 FHWPSFYNVVTGETXAXPXLIALQHIPLXQLGVIAKKAAPICXFQQXR 570
           +HWPSFYNVVTG+T A P LIALQHIPL   GVI+++A      QQ R
Sbjct: 4   WHWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLR 51


>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
           Beta-galactosidase - Yersinia pseudotuberculosis
          Length = 1066

 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 23/55 (41%), Positives = 31/55 (56%)
 Frame = +3

Query: 417 RITISLAVVLQRRDWGNPGGTXLNRLAAHPPXPAGRNSEEGRTDLXFPTXAXLNG 581
           ++ +SL  +L RRDW NP  T  +RL AHPP  + R+ E  + D   P    LNG
Sbjct: 10  QVQLSLPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQQQTLNG 64


>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
           Enterobacter sakazakii ATCC BAA-894|Rep: Putative
           uncharacterized protein - Enterobacter sakazakii ATCC
           BAA-894
          Length = 1043

 Score = 39.1 bits (87), Expect = 0.15
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +3

Query: 423 TISLAVVLQRRDWGNPGGTXLNRLAAHPPXPAGRNSEEGR 542
           T  LA +L R DW NP  T +NRL +H P    R+++  R
Sbjct: 15  TRPLATILARNDWQNPAITSVNRLPSHTPLHGWRDADRAR 54


>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09076 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 109

 Score = 37.1 bits (82), Expect = 0.62
 Identities = 22/52 (42%), Positives = 27/52 (51%)
 Frame = +3

Query: 381 GGAXYPIRPIVSRITISLAVVLQRRDWGNPGGTXLNRLAAHPPXPAGRNSEE 536
           GGA  PI P      IS A  L+RR+  NPG   LN L A P  P G  +++
Sbjct: 39  GGARDPISPKGGPNKISGAAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKK 90


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 36.7 bits (81), Expect = 0.81
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = +3

Query: 363 R*RHSRGGAXYPIRPIVSRIT 425
           R R  RGGA YPIRPIVSRIT
Sbjct: 255 RYRRPRGGARYPIRPIVSRIT 275


>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
           Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
           pneumoniae
          Length = 1034

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = +3

Query: 441 VLQRRDWGNPGGTXLNRLAAHPPXPAGRNSEEGRTDLXFPTXAXLNG 581
           VL R DW N   T LNRL AHP   + R+    R +L       L+G
Sbjct: 17  VLAREDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSSRRRQLDG 63


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,888,365
Number of Sequences: 1657284
Number of extensions: 12487712
Number of successful extensions: 22094
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22086
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82391630811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)