Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0245.Seq
         (906 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063308-1|AAH63308.1|  961|Homo sapiens DDEF2 protein protein.        32   2.5  
AK091121-1|BAC03588.1|  208|Homo sapiens protein ( Homo sapiens ...    32   2.5  
AC080162-1|AAY14856.1|  635|Homo sapiens unknown protein.              32   2.5  
AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein.             32   2.5  

>BC063308-1|AAH63308.1|  961|Homo sapiens DDEF2 protein protein.
          Length = 961

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 891 PGFXGFRAPFAPKKP*XGXMVPRRGPSPGXDXFSPLWTVGXPR 763
           PG    R P  P +P     +P++ P+PG D  +PL   G PR
Sbjct: 824 PGISQIRPPPLPPQP--PSRLPQKKPAPGADKSTPLTNKGQPR 864


>AK091121-1|BAC03588.1|  208|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33802 fis, clone CTONG2000452, highly similar to
           Development- and differentiation-enhancing factor 2;
           PYK2 C ).
          Length = 208

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 891 PGFXGFRAPFAPKKP*XGXMVPRRGPSPGXDXFSPLWTVGXPR 763
           PG    R P  P +P     +P++ P+PG D  +PL   G PR
Sbjct: 71  PGISQIRPPPLPPQP--PSRLPQKKPAPGADKSTPLTNKGQPR 111


>AC080162-1|AAY14856.1|  635|Homo sapiens unknown protein.
          Length = 635

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 891 PGFXGFRAPFAPKKP*XGXMVPRRGPSPGXDXFSPLWTVGXPR 763
           PG    R P  P +P     +P++ P+PG D  +PL   G PR
Sbjct: 498 PGISQIRPPPLPPQP--PSRLPQKKPAPGADKSTPLTNKGQPR 538


>AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein.
          Length = 1022

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 891  PGFXGFRAPFAPKKP*XGXMVPRRGPSPGXDXFSPLWTVGXPR 763
            PG    R P  P +P     +P++ P+PG D  +PL   G PR
Sbjct: 885  PGISQIRPPPLPPQP--PSRLPQKKPAPGADKSTPLTNKGQPR 925


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,977,668
Number of Sequences: 237096
Number of extensions: 2084497
Number of successful extensions: 3504
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3504
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)