Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0240.Seq
         (910 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    27   1.0  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    26   1.4  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            26   1.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   4.2  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    25   4.2  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 13/34 (38%), Positives = 24/34 (70%)
 Frame = +1

Query: 496 ISILRTSIVFLPIVSRVPRPPDMTLVPVVSTNLV 597
           ISIL + +VFL +VS++  PP   ++P+++  L+
Sbjct: 268 ISILLSLVVFLLLVSKI-LPPTSLVLPLIAKYLL 300


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -2

Query: 747 PSYFLVFL--PLVADASATRLLSQPCSLGLVRVCLNVCDDTV 628
           P Y+ +FL  P+ ADAS   +L       LV+    VC DTV
Sbjct: 57  PHYWELFLAHPIDADASHCSILENEVVFELVKQDPTVCWDTV 98


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -2

Query: 747 PSYFLVFL--PLVADASATRLLSQPCSLGLVRVCLNVCDDTV 628
           P Y+ +FL  P+ ADAS   +L       LV+    VC DTV
Sbjct: 57  PHYWELFLAHPIDADASHCSILENEVVFELVKQDPTVCWDTV 98


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 573 ASSFNKFSHF*DKTSKW--KRLYHRRRSNKHALVRD 674
           A SFNK SHF +   +W   RL    R +  A  RD
Sbjct: 358 AKSFNKMSHF-NSLKQWGMNRLRMMNRDSSSASQRD 392


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 573 ASSFNKFSHF*DKTSKW--KRLYHRRRSNKHALVRD 674
           A SFNK SHF +   +W   RL    R +  A  RD
Sbjct: 359 AKSFNKMSHF-NSLKQWGMNRLRMMNRDSSSASQRD 393


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,143
Number of Sequences: 2352
Number of extensions: 11851
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)