Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0240.Seq
         (910 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015963-1|AAV36848.1|  280|Drosophila melanogaster RH39848p pro...    38   0.025
AY052123-1|AAK93547.1|  280|Drosophila melanogaster SD07605p pro...    38   0.025
AE014297-2077|AAF55221.1|  460|Drosophila melanogaster CG9590-PA...    38   0.025
AY061564-1|AAL29112.1|  374|Drosophila melanogaster LP11612p pro...    29   8.8  
AE014296-2405|AAF49721.2|  374|Drosophila melanogaster CG4914-PA...    29   8.8  

>BT015963-1|AAV36848.1|  280|Drosophila melanogaster RH39848p
           protein.
          Length = 280

 Score = 37.5 bits (83), Expect = 0.025
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = -1

Query: 250 LSPEKRQDLKETLQQVAELCXXXXXXXXXXXXXXDTFKSEAFHERLXTATQDLGLKLQFQ 71
           +S   R +L+ET+ +V EL                 +++E   ERL    +D  L +QF 
Sbjct: 93  VSGNARAELQETINEVKELIELEDLDVESEGD----YEAEELSERLAATIKDAELGIQFD 148

Query: 70  PIVKQYTEAIDWLSS 26
            I   +T+++ WL+S
Sbjct: 149 DIANHWTQSLSWLTS 163



 Score = 35.1 bits (77), Expect = 0.13
 Identities = 13/31 (41%), Positives = 25/31 (80%)
 Frame = -2

Query: 357 VHYENLFDDFEGLVHLEALEMLSRQVNMRIE 265
           + +E LF+++ GLVH EALE+LS++  ++++
Sbjct: 57  LRFEILFENYCGLVHFEALEILSKESRLKLD 87


>AY052123-1|AAK93547.1|  280|Drosophila melanogaster SD07605p
           protein.
          Length = 280

 Score = 37.5 bits (83), Expect = 0.025
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = -1

Query: 250 LSPEKRQDLKETLQQVAELCXXXXXXXXXXXXXXDTFKSEAFHERLXTATQDLGLKLQFQ 71
           +S   R +L+ET+ +V EL                 +++E   ERL    +D  L +QF 
Sbjct: 93  VSGNARAELQETINEVKELIELEDLDVESEGD----YEAEELSERLAATIKDAELGIQFD 148

Query: 70  PIVKQYTEAIDWLSS 26
            I   +T+++ WL+S
Sbjct: 149 DIANHWTQSLSWLTS 163



 Score = 35.1 bits (77), Expect = 0.13
 Identities = 13/31 (41%), Positives = 25/31 (80%)
 Frame = -2

Query: 357 VHYENLFDDFEGLVHLEALEMLSRQVNMRIE 265
           + +E LF+++ GLVH EALE+LS++  ++++
Sbjct: 57  LRFEILFENYCGLVHFEALEILSKESRLKLD 87


>AE014297-2077|AAF55221.1|  460|Drosophila melanogaster CG9590-PA
           protein.
          Length = 460

 Score = 37.5 bits (83), Expect = 0.025
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = -3

Query: 590 FVETTGTKVISGGLGTLETIGKKTMEVLK 504
           FV   G+KV++ GL TLE IGKKTM +L+
Sbjct: 157 FVTNLGSKVLNTGLDTLEGIGKKTMTILQ 185



 Score = 37.5 bits (83), Expect = 0.025
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = -1

Query: 250 LSPEKRQDLKETLQQVAELCXXXXXXXXXXXXXXDTFKSEAFHERLXTATQDLGLKLQFQ 71
           +S   R +L+ET+ +V EL                 +++E   ERL    +D  L +QF 
Sbjct: 273 VSGNARAELQETINEVKELIELEDLDVESEGD----YEAEELSERLAATIKDAELGIQFD 328

Query: 70  PIVKQYTEAIDWLSS 26
            I   +T+++ WL+S
Sbjct: 329 DIANHWTQSLSWLTS 343



 Score = 35.1 bits (77), Expect = 0.13
 Identities = 13/31 (41%), Positives = 25/31 (80%)
 Frame = -2

Query: 357 VHYENLFDDFEGLVHLEALEMLSRQVNMRIE 265
           + +E LF+++ GLVH EALE+LS++  ++++
Sbjct: 237 LRFEILFENYCGLVHFEALEILSKESRLKLD 267


>AY061564-1|AAL29112.1|  374|Drosophila melanogaster LP11612p
           protein.
          Length = 374

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
 Frame = -3

Query: 575 GTKVISGGLGTLETIGKKTMEVLKMEILGWQRNE-----HYSA*LLTRNRCCHKY 426
           GTK I+ G GTL+  GK +  + ++E+     +E     +Y+  ++T+N  C  Y
Sbjct: 248 GTKAIATGWGTLKEDGKPSCLLQEVEVPVLDNDECVAQTNYTQKMITKNMMCSGY 302


>AE014296-2405|AAF49721.2|  374|Drosophila melanogaster CG4914-PA
           protein.
          Length = 374

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
 Frame = -3

Query: 575 GTKVISGGLGTLETIGKKTMEVLKMEILGWQRNE-----HYSA*LLTRNRCCHKY 426
           GTK I+ G GTL+  GK +  + ++E+     +E     +Y+  ++T+N  C  Y
Sbjct: 248 GTKAIATGWGTLKEDGKPSCLLQEVEVPVLDNDECVAQTNYTQKMITKNMMCSGY 302


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,839,688
Number of Sequences: 53049
Number of extensions: 540398
Number of successful extensions: 1764
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1764
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)