Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0238.Seq
         (519 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006362-1|AAH06362.2|  271|Homo sapiens phosphatidic acid phosp...    30   5.6  
AL354855-2|CAI16275.1|  271|Homo sapiens phosphatidic acid phosp...    30   5.6  
AK075207-1|BAC11472.1|  271|Homo sapiens protein ( Homo sapiens ...    30   5.6  
AK027568-1|BAB55204.1|  271|Homo sapiens protein ( Homo sapiens ...    30   5.6  

>BC006362-1|AAH06362.2|  271|Homo sapiens phosphatidic acid
           phosphatase type 2 domain containing 3 protein.
          Length = 271

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 61  LMAWVVSVSISRVLAERHYLLDSXXXXXXXXLEGLFMSLIW 183
           L+ W + V +SRV+  RH++ D         L+   + L+W
Sbjct: 218 LVLWALCVGLSRVMIGRHHVTDVLSGFVIGYLQFRLVELVW 258


>AL354855-2|CAI16275.1|  271|Homo sapiens phosphatidic acid
           phosphatase type 2 domain containing 3 protein.
          Length = 271

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 61  LMAWVVSVSISRVLAERHYLLDSXXXXXXXXLEGLFMSLIW 183
           L+ W + V +SRV+  RH++ D         L+   + L+W
Sbjct: 218 LVLWALCVGLSRVMIGRHHVTDVLSGFVIGYLQFRLVELVW 258


>AK075207-1|BAC11472.1|  271|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90726 fis, clone PLACE1009546. ).
          Length = 271

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 61  LMAWVVSVSISRVLAERHYLLDSXXXXXXXXLEGLFMSLIW 183
           L+ W + V +SRV+  RH++ D         L+   + L+W
Sbjct: 218 LVLWALCVGLSRVMIGRHHVTDVLSGFVIGYLQFRLVELVW 258


>AK027568-1|BAB55204.1|  271|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14662 fis, clone NT2RP2002857. ).
          Length = 271

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 61  LMAWVVSVSISRVLAERHYLLDSXXXXXXXXLEGLFMSLIW 183
           L+ W + V +SRV+  RH++ D         L+   + L+W
Sbjct: 218 LVLWALCVGLSRVMIGRHHVTDVLSGFVIGYLQFRLVELVW 258


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,678,340
Number of Sequences: 237096
Number of extensions: 1318442
Number of successful extensions: 1656
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1652
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)