Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0238.Seq
         (519 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p pro...    54   1e-07
AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-P...    54   1e-07

>AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p
           protein.
          Length = 204

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
 Frame = +1

Query: 13  FILIYFDSV---SIIFYPPLMAWVVSVSISRVLAERHYLLDSXXXXXXXXLEGLFMSLIW 183
           F+L++F  +    IIF  P+ AW VSV+ISR++ +RHY+LD         LE L + L+W
Sbjct: 123 FVLLFFAKLYPLHIIFLMPVTAWAVSVAISRLILQRHYILDICAGAAIGVLEALIVGLLW 182

Query: 184 XXXXXXXXXXXXXXDEKLDGGE 249
                         +E +D  E
Sbjct: 183 ISEETAFSIVGFVTEETVDSME 204


>AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-PA
           protein.
          Length = 204

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
 Frame = +1

Query: 13  FILIYFDSV---SIIFYPPLMAWVVSVSISRVLAERHYLLDSXXXXXXXXLEGLFMSLIW 183
           F+L++F  +    IIF  P+ AW VSV+ISR++ +RHY+LD         LE L + L+W
Sbjct: 123 FVLLFFAKLYPLHIIFLMPVTAWAVSVAISRLILQRHYILDICAGAAIGVLEALIVGLLW 182

Query: 184 XXXXXXXXXXXXXXDEKLDGGE 249
                         +E +D  E
Sbjct: 183 ISEETAFSIVGFVTEETVDSME 204


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,948,104
Number of Sequences: 53049
Number of extensions: 385904
Number of successful extensions: 706
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)