Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0237.Seq
         (907 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08110-1|CAA69325.1| 2214|Homo sapiens mosaic protein LR11 protein.    33   1.9  
U60975-1|AAC50891.2| 2214|Homo sapiens gp250 precursor protein.        33   1.9  

>Y08110-1|CAA69325.1| 2214|Homo sapiens mosaic protein LR11 protein.
          Length = 2214

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 16/40 (40%), Positives = 27/40 (67%)
 Frame = -2

Query: 513  PVIFLINLQHQVGMALLHILHQRLTNTALTAFGATNIAAR 394
            P++FLI L   VG A+L+  H+RL  ++ TAF  ++ ++R
Sbjct: 2142 PILFLILLSLGVGFAILYTKHRRL-QSSFTAFANSHYSSR 2180


>U60975-1|AAC50891.2| 2214|Homo sapiens gp250 precursor protein.
          Length = 2214

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 16/40 (40%), Positives = 27/40 (67%)
 Frame = -2

Query: 513  PVIFLINLQHQVGMALLHILHQRLTNTALTAFGATNIAAR 394
            P++FLI L   VG A+L+  H+RL  ++ TAF  ++ ++R
Sbjct: 2142 PILFLILLSLGVGFAILYTKHRRL-QSSFTAFANSHYSSR 2180


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,166,867
Number of Sequences: 237096
Number of extensions: 4004942
Number of successful extensions: 9289
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9286
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)