Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0237.Seq
         (907 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p pro...    30   3.8  
AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA...    30   3.8  
AY070573-1|AAL48044.1|  212|Drosophila melanogaster RE11751p pro...    29   8.8  
AE014298-2172|AAF48472.1|  212|Drosophila melanogaster CG15643-P...    29   8.8  

>BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p
           protein.
          Length = 1098

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 20/47 (42%), Positives = 26/47 (55%)
 Frame = -2

Query: 438 NTALTAFGATNIAARNRPSIMLTKPRSLPSSSQTQFCALAR*ASRTS 298
           N+A T F ++  A    PS +LTKPR  P    T+ CAL R +S  S
Sbjct: 468 NSAST-FSSSYSATPTSPSYLLTKPRESP---YTKVCALRRQSSSAS 510


>AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA
           protein.
          Length = 1098

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 20/47 (42%), Positives = 26/47 (55%)
 Frame = -2

Query: 438 NTALTAFGATNIAARNRPSIMLTKPRSLPSSSQTQFCALAR*ASRTS 298
           N+A T F ++  A    PS +LTKPR  P    T+ CAL R +S  S
Sbjct: 468 NSAST-FSSSYSATPTSPSYLLTKPRESP---YTKVCALRRQSSSAS 510


>AY070573-1|AAL48044.1|  212|Drosophila melanogaster RE11751p
           protein.
          Length = 212

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 70  LKKRGFKFVGTTICYSFMQACGLVNDHVVGCCCYPGNKP 186
           L+  G  +     C +    CG V ++ V CC +PG +P
Sbjct: 108 LELPGIGYYSCRTCNTSTHCCG-VYEYCVSCCLHPGQQP 145


>AE014298-2172|AAF48472.1|  212|Drosophila melanogaster CG15643-PA
           protein.
          Length = 212

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 70  LKKRGFKFVGTTICYSFMQACGLVNDHVVGCCCYPGNKP 186
           L+  G  +     C +    CG V ++ V CC +PG +P
Sbjct: 108 LELPGIGYYSCRTCNTSTHCCG-VYEYCVSCCLHPGQQP 145


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,758,827
Number of Sequences: 53049
Number of extensions: 1144514
Number of successful extensions: 2826
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2825
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)