Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0236.Seq
         (900 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            27   1.0  
AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding pr...    23   9.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.6  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    23   9.6  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +1

Query: 37  ACKAEEELPERCKAFGRVSFTADFICHSRRGY*D 138
           AC  + E P++C  +   S++++ +  SR GY D
Sbjct: 751 ACDCKMECPKQCTCYHDQSWSSNVVDCSRAGYDD 784


>AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP17 protein.
          Length = 155

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -3

Query: 688 TICHSPFQVRNCWEGRSVRASSLLRQL 608
           T+C   F +  CW+    + +  LR++
Sbjct: 121 TLCDKAFWLHKCWKQSDPKVNMALRRI 147


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 558 NPGVTQLNRLAAHPPFASWRNS 623
           +PG     +L+ HPP AS R+S
Sbjct: 835 HPGAQTQPQLSQHPPGASGRSS 856


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 178 NDYVLNGVDTSIRDLNNLVESD 113
           ND V + +DT++ D N+L E+D
Sbjct: 267 NDLVTSIIDTALVDDNSLQETD 288


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,239
Number of Sequences: 2352
Number of extensions: 15826
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)