Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0236.Seq
         (900 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069116-1|AAL39261.1|  246|Drosophila melanogaster GH12958p pro...   159   4e-39
AF218238-1|AAG13186.1|  246|Drosophila melanogaster vacuolar pro...   159   4e-39
AE013599-2075|AAF58126.1|  246|Drosophila melanogaster CG8186-PA...   159   4e-39
AL138972-6|CAB72289.1|  249|Drosophila melanogaster EG:BACR25B3....   152   7e-37
AE014298-411|AAG22401.2|  249|Drosophila melanogaster CG8310-PA ...   152   7e-37
AY075304-1|AAL68171.1|  373|Drosophila melanogaster AT31643p pro...    83   7e-16
AE013599-1430|AAF58545.1|  373|Drosophila melanogaster CG13167-P...    83   7e-16
AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-P...    31   1.6  
AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-P...    31   1.6  
AY051795-1|AAK93219.1|  541|Drosophila melanogaster LD31064p pro...    30   3.8  
AL033125-6|CAA21829.1|  510|Drosophila melanogaster EG:EG0007.7 ...    30   3.8  
AE014298-602|AAF45923.3|  541|Drosophila melanogaster CG6121-PA ...    30   3.8  
AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-P...    30   5.0  

>AY069116-1|AAL39261.1|  246|Drosophila melanogaster GH12958p
           protein.
          Length = 246

 Score =  159 bits (387), Expect = 4e-39
 Identities = 79/82 (96%), Positives = 82/82 (100%)
 Frame = +2

Query: 2   YELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP 181
           YELAGLARGGQQLAKLKKN+QSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP
Sbjct: 119 YELAGLARGGQQLAKLKKNYQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP 178

Query: 182 RLERTLAYIISELDELEREEFY 247
           R++RTLAYIISELDELEREEFY
Sbjct: 179 RIDRTLAYIISELDELEREEFY 200


>AF218238-1|AAG13186.1|  246|Drosophila melanogaster vacuolar
           proton-translocatingATPase subunit D protein.
          Length = 246

 Score =  159 bits (387), Expect = 4e-39
 Identities = 79/82 (96%), Positives = 82/82 (100%)
 Frame = +2

Query: 2   YELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP 181
           YELAGLARGGQQLAKLKKN+QSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP
Sbjct: 119 YELAGLARGGQQLAKLKKNYQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP 178

Query: 182 RLERTLAYIISELDELEREEFY 247
           R++RTLAYIISELDELEREEFY
Sbjct: 179 RIDRTLAYIISELDELEREEFY 200


>AE013599-2075|AAF58126.1|  246|Drosophila melanogaster CG8186-PA
           protein.
          Length = 246

 Score =  159 bits (387), Expect = 4e-39
 Identities = 79/82 (96%), Positives = 82/82 (100%)
 Frame = +2

Query: 2   YELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP 181
           YELAGLARGGQQLAKLKKN+QSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP
Sbjct: 119 YELAGLARGGQQLAKLKKNYQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP 178

Query: 182 RLERTLAYIISELDELEREEFY 247
           R++RTLAYIISELDELEREEFY
Sbjct: 179 RIDRTLAYIISELDELEREEFY 200


>AL138972-6|CAB72289.1|  249|Drosophila melanogaster EG:BACR25B3.4
           protein.
          Length = 249

 Score =  152 bits (368), Expect = 7e-37
 Identities = 73/82 (89%), Positives = 80/82 (97%)
 Frame = +2

Query: 2   YELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP 181
           YELAGLARGGQQLAKLKKN+QSAV+LLV+LASLQTSFVTLD+VIK+TNRRVNAIEHVIIP
Sbjct: 119 YELAGLARGGQQLAKLKKNYQSAVRLLVQLASLQTSFVTLDDVIKVTNRRVNAIEHVIIP 178

Query: 182 RLERTLAYIISELDELEREEFY 247
           R+ RT+ YIISELDELEREEFY
Sbjct: 179 RINRTIEYIISELDELEREEFY 200


>AE014298-411|AAG22401.2|  249|Drosophila melanogaster CG8310-PA
           protein.
          Length = 249

 Score =  152 bits (368), Expect = 7e-37
 Identities = 73/82 (89%), Positives = 80/82 (97%)
 Frame = +2

Query: 2   YELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP 181
           YELAGLARGGQQLAKLKKN+QSAV+LLV+LASLQTSFVTLD+VIK+TNRRVNAIEHVIIP
Sbjct: 119 YELAGLARGGQQLAKLKKNYQSAVRLLVQLASLQTSFVTLDDVIKVTNRRVNAIEHVIIP 178

Query: 182 RLERTLAYIISELDELEREEFY 247
           R+ RT+ YIISELDELEREEFY
Sbjct: 179 RINRTIEYIISELDELEREEFY 200


>AY075304-1|AAL68171.1|  373|Drosophila melanogaster AT31643p
           protein.
          Length = 373

 Score = 82.6 bits (195), Expect = 7e-16
 Identities = 39/82 (47%), Positives = 56/82 (68%)
 Frame = +2

Query: 2   YELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP 181
           + LAGL+ GG Q+++++ ++  A+K LVE ASL+     L+     TN RVNA+EHV+IP
Sbjct: 119 FPLAGLSCGGMQVSRIRDSYTKALKALVEFASLEYQVRMLEAASLQTNMRVNALEHVVIP 178

Query: 182 RLERTLAYIISELDELEREEFY 247
            L+ T  YI  EL+E ERE+FY
Sbjct: 179 ILQNTYNYICGELEEFEREDFY 200


>AE013599-1430|AAF58545.1|  373|Drosophila melanogaster CG13167-PA
           protein.
          Length = 373

 Score = 82.6 bits (195), Expect = 7e-16
 Identities = 39/82 (47%), Positives = 56/82 (68%)
 Frame = +2

Query: 2   YELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP 181
           + LAGL+ GG Q+++++ ++  A+K LVE ASL+     L+     TN RVNA+EHV+IP
Sbjct: 119 FPLAGLSCGGMQVSRIRDSYTKALKALVEFASLEYQVRMLEAASLQTNMRVNALEHVVIP 178

Query: 182 RLERTLAYIISELDELEREEFY 247
            L+ T  YI  EL+E ERE+FY
Sbjct: 179 ILQNTYNYICGELEEFEREDFY 200


>AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-PB,
           isoform B protein.
          Length = 1257

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 25/72 (34%), Positives = 30/72 (41%)
 Frame = +1

Query: 472 SRGGPVPNSPYSGRITIHWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALP 651
           S GG     P  G  T   PS     TG   A  +L++  H PL   GVI K   P  LP
Sbjct: 5   SEGG-AGGGPVGGGSTATAPS----ATGSLSASASLVSHSHPPLQLRGVINKYSLPSHLP 59

Query: 652 NSCAPEMANGKL 687
           +S A      K+
Sbjct: 60  SSAAHPAVAAKI 71


>AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-PD,
           isoform D protein.
          Length = 1272

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 25/72 (34%), Positives = 30/72 (41%)
 Frame = +1

Query: 472 SRGGPVPNSPYSGRITIHWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALP 651
           S GG     P  G  T   PS     TG   A  +L++  H PL   GVI K   P  LP
Sbjct: 20  SEGG-AGGGPVGGGSTATAPS----ATGSLSASASLVSHSHPPLQLRGVINKYSLPSHLP 74

Query: 652 NSCAPEMANGKL 687
           +S A      K+
Sbjct: 75  SSAAHPAVAAKI 86


>AY051795-1|AAK93219.1|  541|Drosophila melanogaster LD31064p
           protein.
          Length = 541

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 571 PNLIALQHIPLSPAGVIAKRPAPIALPNSCAP 666
           P   AL  IP +P G     P P  +PNS AP
Sbjct: 119 PGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 150


>AL033125-6|CAA21829.1|  510|Drosophila melanogaster EG:EG0007.7
           protein.
          Length = 510

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 571 PNLIALQHIPLSPAGVIAKRPAPIALPNSCAP 666
           P   AL  IP +P G     P P  +PNS AP
Sbjct: 87  PGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 118


>AE014298-602|AAF45923.3|  541|Drosophila melanogaster CG6121-PA
           protein.
          Length = 541

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 571 PNLIALQHIPLSPAGVIAKRPAPIALPNSCAP 666
           P   AL  IP +P G     P P  +PNS AP
Sbjct: 119 PGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 150


>AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-PC,
           isoform C protein.
          Length = 1294

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +1

Query: 550 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCAPEMANGKL 687
           TG   A  +L++  H PL   GVI K   P  LP+S A      K+
Sbjct: 63  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAAHPAVAAKI 108


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,969,648
Number of Sequences: 53049
Number of extensions: 708818
Number of successful extensions: 1653
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1653
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)