Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0235.Seq
(823 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 104 1e-22
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 101 5e-22
09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821 100 3e-21
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 100 3e-21
04_01_0042 + 473912-474058,474208-474349,474442-476264 97 1e-20
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 49 4e-06
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 46 4e-05
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 43 3e-04
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 38 0.010
12_01_0179 - 1319291-1319332,1319884-1320579,1322759-1323207,132... 31 0.84
11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,141... 31 0.84
01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489... 30 2.6
03_01_0653 - 4778265-4778902,4779738-4779853,4779982-4780051,478... 29 5.9
08_01_0835 + 8147177-8147359,8147871-8147968,8148045-8148102,814... 28 7.8
06_03_0473 + 21190878-21191188,21191269-21192355,21192972-211931... 28 7.8
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 104 bits (249), Expect = 1e-22
Identities = 52/86 (60%), Positives = 67/86 (77%)
Frame = -2
Query: 267 IKAETEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQ 88
++ +ADKNDK+VKDLV+LL+ETALL+SGF+LD+P SRI+RM+KLGL IDEDE +
Sbjct: 619 LRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSIDEDETAE 678
Query: 87 VEEPASGDVPPLEGDADDASRMEEVD 10
A D+PPLE DA + S+MEEVD
Sbjct: 679 ----ADTDMPPLEDDAGE-SKMEEVD 699
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 101 bits (243), Expect = 5e-22
Identities = 50/86 (58%), Positives = 67/86 (77%)
Frame = -2
Query: 267 IKAETEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQ 88
++ +ADKNDK+VKDLV+LL+ETALL+SGF+L++P +RI+RM+KLGL IDEDE +
Sbjct: 619 LRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAE 678
Query: 87 VEEPASGDVPPLEGDADDASRMEEVD 10
A D+PPLE DA + S+MEEVD
Sbjct: 679 ----ADADMPPLEDDAGE-SKMEEVD 699
>09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821
Length = 576
Score = 99.5 bits (237), Expect = 3e-21
Identities = 49/85 (57%), Positives = 66/85 (77%)
Frame = -2
Query: 267 IKAETEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQ 88
++ +ADKNDK+VKDLV+LL+ETALL+SGF+L++P +RI+RM+KLGL IDEDE +
Sbjct: 365 LRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAE 424
Query: 87 VEEPASGDVPPLEGDADDASRMEEV 13
A D+PPLE DA + S+MEEV
Sbjct: 425 ----ADADMPPLEDDAGE-SKMEEV 444
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 99.5 bits (237), Expect = 3e-21
Identities = 49/85 (57%), Positives = 66/85 (77%)
Frame = -2
Query: 267 IKAETEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQ 88
++ +ADKNDK+VKDLV+LL+ETALL+SGF+L++P +RI+RM+KLGL IDEDE +
Sbjct: 619 LRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAE 678
Query: 87 VEEPASGDVPPLEGDADDASRMEEV 13
A D+PPLE DA + S+MEEV
Sbjct: 679 ----ADADMPPLEDDAGE-SKMEEV 698
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/86 (52%), Positives = 66/86 (76%)
Frame = -2
Query: 267 IKAETEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQ 88
++ +AD NDK+V+DLV+LL+ETALL+SGF+LD+P A+RI+RM+KLGL ID+D+
Sbjct: 620 LRKRADADANDKSVRDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLNIDDDDAAA 679
Query: 87 VEEPASGDVPPLEGDADDASRMEEVD 10
++ A D+P L+ A + S+MEEVD
Sbjct: 680 ADDDA--DMPALDDAAAEESKMEEVD 703
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/84 (29%), Positives = 47/84 (55%)
Frame = -2
Query: 267 IKAETEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQ 88
++ + D +++K L+Y+TAL+ SGF L +P+ AS IYR ++ L + D ++
Sbjct: 747 LRDKVAQDSESESLKQTAKLVYQTALMESGFNLPDPKDFASSIYRSVQKSLDLSPDAAVE 806
Query: 87 VEEPASGDVPPLEGDADDASRMEE 16
EE +V E + ++S ++E
Sbjct: 807 EEE----EVEEAEVEEKESSNIKE 826
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 46.0 bits (104), Expect = 4e-05
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = -2
Query: 270 NIKAETEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPI 91
++ A + + K V LLYETAL+SSG+T D P +IY M+ + LG P
Sbjct: 703 DLSAACKNEPESTEAKRAVELLYETALISSGYTPDSPAELGGKIYEMMTIALGGRWGRPE 762
Query: 90 QVEEPASG---DVPPLEGDADDASRMEEV 13
+ E S +V EG A + EV
Sbjct: 763 ESEAATSESNVEVESSEGSATEVVEPSEV 791
>08_02_1073 - 24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = -2
Query: 270 NIKAETEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLG 112
++ A + + K V LLYETAL+SSG+T D P +IY M+ + LG
Sbjct: 952 DLNAACKNEPESTEAKRAVELLYETALISSGYTPDSPAELGGKIYEMMTIALG 1004
>12_02_0522 - 19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = -2
Query: 267 IKAETEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGL 115
+ A A+ +D V +L+ET+++SSGFT D P + +IY M+ +
Sbjct: 964 LNAACRANPDDPEALKAVDILFETSMISSGFTPDNPAELSGKIYEMMSTAM 1014
>12_01_0179 -
1319291-1319332,1319884-1320579,1322759-1323207,
1323291-1324903,1324991-1325077,1326983-1327251
Length = 1051
Score = 31.5 bits (68), Expect = 0.84
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = -2
Query: 276 CGNIKAETEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDE 97
C + +++ D ++ D++ +L E L +D H S + R L D+DE
Sbjct: 331 CSDSESDLTESSPDASMTDIIPMLEELHPL-----IDLQTGHPSLVSRD-NLNTSSDDDE 384
Query: 96 PIQVEEPASGDVPPLEGDADDASRMEEV 13
EE AS D LEG DD + ++V
Sbjct: 385 DDLEEEDASTDENQLEGKIDDFANWKDV 412
>11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,
1414639-1414725,1416244-1416411,1416785-1416958,
1417662-1417720,1418132-1420154,1420549-1420647,
1420998-1421796,1422101-1422120,1422446-1422513
Length = 1827
Score = 31.5 bits (68), Expect = 0.84
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = -2
Query: 276 CGNIKAETEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDE 97
C + +++ D ++ D++ +L E L +D H S + R L D+DE
Sbjct: 1378 CSDSESDLTESSPDASMTDIIPMLEELHPL-----IDLQTGHPSLVSRD-NLNTSSDDDE 1431
Query: 96 PIQVEEPASGDVPPLEGDADDASRMEEV 13
EE AS D LEG DD + ++V
Sbjct: 1432 DDLEEEDASTDENQLEGKIDDFANWKDV 1459
>01_01_0645 +
4890647-4890682,4891684-4891929,4892021-4892317,
4892407-4892574,4892674-4892841,4892924-4893004,
4893105-4893171,4893657-4893751,4894027-4894099,
4894177-4894247,4894325-4894374,4895263-4895375,
4895461-4895513
Length = 505
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 135 RMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDAS 28
R++ G+D DE + + EP D+P + G A S
Sbjct: 256 RIVLAATGVDHDELVSIAEPLLSDMPGVTGPAKPKS 291
>03_01_0653 -
4778265-4778902,4779738-4779853,4779982-4780051,
4780189-4780402
Length = 345
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +3
Query: 303 GGARYPIRPIVSRITIHWPVVLQRRDWENPGVTQLNRLAAHPPF--ASWRNSEEARTDRP 476
GGAR +P+ +R PV L + P T ++ A P R S+E ++R
Sbjct: 185 GGARLAAKPVSARTNRSRPVELPVEETSPPSSTSSDKPPAAPQLQPGGGRGSDETESNRA 244
Query: 477 SQQLRX*MANGN 512
L +A G+
Sbjct: 245 GSMLLQLIACGS 256
>08_01_0835 +
8147177-8147359,8147871-8147968,8148045-8148102,
8148192-8148271,8148770-8148872,8148966-8149181
Length = 245
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 94 RLIFINTKTQFDHSIDTGSMDLGLIKREARRQQGSFIQ*DNKILNSFVILV 246
+LIF K Q+ D +L +KREAR + G ++ + K+L FV+ +
Sbjct: 45 KLIFARAK-QYAQEYDAQEKELVQLKREARMKGGFYVSPEAKLL--FVVRI 92
>06_03_0473 + 21190878-21191188,21191269-21192355,21192972-21193194,
21193286-21193356,21193385-21193441,21193442-21194056,
21194168-21194237,21194470-21194745,21194916-21195130,
21195224-21195529,21195750-21195813,21195902-21196141,
21196306-21196415
Length = 1214
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +1
Query: 289 GLISKG--GPGTQFAL**VVLQFTGPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRP 462
G +S G G FAL +Q FY+ + +++ + H+P P +I +
Sbjct: 899 GAVSPGFAGLSLSFALSLTAVQVFLTKFYSYMENYIISVERIKQYMHLPPEPPAIIPENR 958
Query: 463 APIALP 480
AP + P
Sbjct: 959 APSSWP 964
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,060,061
Number of Sequences: 37544
Number of extensions: 491432
Number of successful extensions: 1274
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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