Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0235.Seq
(823 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 105 3e-23
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC026301-2|AAK68896.2| 320|Caenorhabditis elegans Hypothetical ... 30 1.7
Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical pr... 30 2.3
AC024775-2|AAK68456.1| 452|Caenorhabditis elegans Hypothetical ... 29 3.0
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical pr... 29 4.0
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 4.0
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 4.0
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 4.0
AF043703-3|AAK21500.1| 357|Caenorhabditis elegans Calcium chann... 28 9.3
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 105 bits (253), Expect = 3e-23
Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Frame = -2
Query: 267 IKAETEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQ 88
++ E DKNDK VKDLV+LL+ETALL+SGF+L+EPQ HASRIYRMIKLGL I +DE
Sbjct: 616 LRDRVEVDKNDKTVKDLVVLLFETALLASGFSLEEPQSHASRIYRMIKLGLDIGDDEIED 675
Query: 87 VEEPASGDV-PPLEGDADDASRMEEVD 10
P+S +EG +DASRMEEVD
Sbjct: 676 SAVPSSCTAEAKIEGAEEDASRMEEVD 702
Score = 31.1 bits (67), Expect = 1.00
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -3
Query: 302 LEINPDHSIVETLRQKRKPTRMTKLLRILLSYCMKLPCCLLASRLMSPKS 153
LEINPDH+I++TLR + + + K ++ L+ + L P+S
Sbjct: 604 LEINPDHAIMKTLRDRVEVDKNDKTVKDLVVLLFETALLASGFSLEEPQS 653
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = -2
Query: 249 ADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQVEEPAS 70
A + D LL+ETA L SGF+L + A RI +++ L + +D ++ E+
Sbjct: 680 ASEEDTTAASTAKLLFETATLRSGFSLQDQVGFADRIEAVLRQSLDVSQDAQVETEQHIE 739
Query: 69 GDVPPLEGDADDASRMEE 16
P E +A + + +EE
Sbjct: 740 EAEP--EPEAAEETTIEE 755
>AC026301-2|AAK68896.2| 320|Caenorhabditis elegans Hypothetical
protein Y54F10BM.5 protein.
Length = 320
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 136 IDTGSMDLGLIKREARRQQGSFIQ*DNKI-LNSFVILVGFRFCLNVSTIE*SGLISK 303
+D + DLGL+ + R + D KI + SF+ ++ + C++V +IE GL+S+
Sbjct: 115 MDIAANDLGLLLKHVSRLYFANYVPDIKIFITSFINVLKAKKCIHVRSIELGGLLSR 171
>Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical
protein T05A10.3 protein.
Length = 406
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2
Query: 105 EDEPIQVEEPASGDVPPLEGDADDASRMEEVD*D 4
++EP++VEEP V P EGD AS E + D
Sbjct: 182 DEEPVEVEEPV---VEPTEGDEQMASSSEHITKD 212
>AC024775-2|AAK68456.1| 452|Caenorhabditis elegans Hypothetical
protein Y41D4A.6 protein.
Length = 452
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -2
Query: 174 TLDEPQVHAS---RIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEG 46
+LD P + A + + +++L GID+++ VE P + LEG
Sbjct: 184 SLDAPSIFAKTAQKCWELLELSKGIDKNDSTSVELPEKAGISSLEG 229
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270
PVTT NDG +N +T +YR N + G PL D +++
Sbjct: 2915 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2953
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270
PVTT NDG +N +T +YR N + G PL D +++
Sbjct: 2927 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2965
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270
PVTT NDG +N +T +YR N + G PL D +++
Sbjct: 2813 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2851
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270
PVTT NDG +N +T +YR N + G PL D +++
Sbjct: 2814 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2852
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270
PVTT NDG +N +T +YR N + G PL D +++
Sbjct: 2896 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2934
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270
PVTT NDG +N +T +YR N + G PL D +++
Sbjct: 2915 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2953
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270
PVTT NDG +N +T +YR N + G PL D +++
Sbjct: 2927 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2965
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270
PVTT NDG +N +T +YR N + G PL D +++
Sbjct: 2813 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2851
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270
PVTT NDG +N +T +YR N + G PL D +++
Sbjct: 2814 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2852
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270
PVTT NDG +N +T +YR N + G PL D +++
Sbjct: 2896 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2934
>Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -3
Query: 320 WVPGPPLEINPDHSIVETLRQKRKPTRMTKLLRILLSYCMKLPCCLLASRLMSPKSML 147
W+P P PD S+ E + ++ K T L +I M L +L + ++ P+S L
Sbjct: 245 WIPSPKEVFGPDGSLTEEVGEENKSLIWTLLKQIRPG--MDLSKVVLPTFILEPRSFL 300
>Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -3
Query: 320 WVPGPPLEINPDHSIVETLRQKRKPTRMTKLLRILLSYCMKLPCCLLASRLMSPKSML 147
W+P P PD S+ E + ++ K T L +I M L +L + ++ P+S L
Sbjct: 245 WIPSPKEVFGPDGSLTEEVGEENKSLIWTLLKQIRPG--MDLSKVVLPTFILEPRSFL 300
>Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical
protein ZK1086.1b protein.
Length = 770
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -3
Query: 320 WVPGPPLEINPDHSIVETLRQKRKPTRMTKLLRILLSYCMKLPCCLLASRLMSPKSML 147
W+P P PD S+ E + ++ K T L +I M L +L + ++ P+S L
Sbjct: 282 WIPSPKEVFGPDGSLTEEVGEENKSLIWTLLKQIRPG--MDLSKVVLPTFILEPRSFL 337
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270
PVTT NDG +N +T +YR N + G PL D +++
Sbjct: 2927 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2965
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270
PVTT NDG +N +T +YR N + G PL D +++
Sbjct: 2927 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2965
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270
PVTT NDG +N +T +YR N + G PL D +++
Sbjct: 2927 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2965
>AF043703-3|AAK21500.1| 357|Caenorhabditis elegans Calcium channel,
beta subunit protein2 protein.
Length = 357
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 362 DGPVNCNTTHY--RANWVPGPPLEINPDHSIVETLRQKRKPTRMTKLLRILL 213
D PV NT+ + R+ W P P ++ P + L + +R+T+LL + L
Sbjct: 131 DPPVKHNTSDHQDRSIWEPKCPYKVVPSSRPIVLLGPTLQHSRLTQLLHLAL 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,850,798
Number of Sequences: 27780
Number of extensions: 400533
Number of successful extensions: 874
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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