Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0233.Seq
         (793 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         27   0.88 
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    25   3.5  
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    24   4.7  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   6.2  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   8.2  
AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein pro...    23   8.2  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.6 bits (56), Expect = 0.88
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -1

Query: 616  VEAAESNGKENGTDEAPEDSPAENGDAEESNDASEN 509
            ++ A+SNG E+G ++  ED   ++ D +++     N
Sbjct: 1812 LQHADSNGGEDGNEDDDEDDEDDDDDDDDTTTGEGN 1847


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = -1

Query: 301 HPHIPLLQMYYTHTDSSYYEGLSSFVSDLSLGLYNNKY 188
           H H    Q YY    S+Y +        +S GLYN  +
Sbjct: 133 HSHYSHNQYYYMQNYSNYSQHNFQTAGPISSGLYNGHH 170


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 355 IIYAWFTAMHQCPLEFNSHP 296
           +++  FT   +CPL F+ HP
Sbjct: 1   MLFKLFTIPFRCPLFFSKHP 20


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 520 HRCFLRHHHFQQANLLGLHRYHSL 591
           H     HHH   A+L G H  H++
Sbjct: 504 HHHHHHHHHPTAADLAGYHHQHNV 527


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 673 SNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 545
           + P+ S  E+  ++SP  K+E  +     N    + +D   EN
Sbjct: 37  ATPEPSTTEATEEESPPPKIECTDPREVYNECGSSCDDRTCEN 79


>AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein
           protein.
          Length = 182

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 18/64 (28%), Positives = 28/64 (43%)
 Frame = -1

Query: 697 QEGXAPWGSNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 518
           +EG    GS+  +S  +   ++S     E +E  G+E G D A   S  E G+ E   + 
Sbjct: 109 KEGEEGAGSDDAVSGADDETEESKDDAEEDSEEGGEEGG-DSA---SGGEGGEKESPRNT 164

Query: 517 SENV 506
              V
Sbjct: 165 YRQV 168


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,920
Number of Sequences: 2352
Number of extensions: 14790
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)