Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0227.Seq
         (928 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes ...    60   1e-07
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ...    48   3e-04
UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;...    42   0.030
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    39   0.16 
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    38   0.48 
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|...    36   1.5  
UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3; ...    36   1.9  
UniRef50_Q756I8 Cluster: AER273Cp; n=1; Eremothecium gossypii|Re...    35   3.4  

>UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes
           scapularis|Rep: Putative secreted protein - Ixodes
           scapularis (Black-legged tick) (Deer tick)
          Length = 65

 Score = 59.7 bits (138), Expect = 1e-07
 Identities = 28/51 (54%), Positives = 33/51 (64%)
 Frame = -1

Query: 415 EGDTANGSIYQFWFLRSXSVXWITVVILELIHAIRTLTSDGMSAFIRSKPI 263
           +G+TANGS+ Q WFLRS    WITV ILELIHA+         AFIR + I
Sbjct: 4   QGETANGSLNQLWFLRSFLPTWITVAILELIHAVSPKPLGATGAFIRPRSI 54


>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
           LRRG00114 - Rattus norvegicus (Rat)
          Length = 223

 Score = 48.0 bits (109), Expect = 3e-04
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = +3

Query: 42  LLPSLDVVAVSQAPSPESNPDSP 110
           LLPSLDVVAVSQAPSPE NPDSP
Sbjct: 167 LLPSLDVVAVSQAPSPELNPDSP 189


>UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;
           n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 508

 Score = 41.5 bits (93), Expect = 0.030
 Identities = 27/57 (47%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = -3

Query: 422 SARGRYREWLNISVLVP*ILXSX----LDNCGNSRANTCNQNSDQ*WDECFY*IKTN 264
           S  GRY E  N S+     L S     LDNCGNSRANTC +      D C Y  KTN
Sbjct: 442 STHGRYSETANGSLNQLWFLWSLPSRYLDNCGNSRANTCRRAPTS-GDACIYQTKTN 497


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 39.1 bits (87), Expect = 0.16
 Identities = 18/31 (58%), Positives = 23/31 (74%)
 Frame = +3

Query: 63  VAVSQAPSPESNPDSPLPVTTMVVAETTIES 155
           +A+SQAPSPESN +SPLPV  M+     I+S
Sbjct: 372 LAISQAPSPESNSNSPLPVKAMLGQYPNIKS 402


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 37.5 bits (83), Expect = 0.48
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +3

Query: 9   PPRAGSG*FARLLPSLDVVAVSQAPSP 89
           PP+  SG  +RLL  +D+VA+SQAPSP
Sbjct: 46  PPKVSSGKVSRLLLPVDIVAISQAPSP 72


>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
           tropicalis|Rep: Novel protein - Xenopus tropicalis
           (Western clawed frog) (Silurana tropicalis)
          Length = 118

 Score = 35.9 bits (79), Expect = 1.5
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -3

Query: 170 MSALSTFDGSFCDYHG 123
           MSALSTFDG+FC YHG
Sbjct: 1   MSALSTFDGTFCAYHG 16


>UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3;
           Magnoliophyta|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 234

 Score = 35.5 bits (78), Expect = 1.9
 Identities = 22/72 (30%), Positives = 32/72 (44%)
 Frame = +3

Query: 42  LLPSLDVVAVSQAPSPESNPDSPLPVTTMVVAETTIES**GRHLKDASPVLDHAICKSYP 221
           LL  L+      +P+P S+  SP P  +   +   I    G H +  SPVL  A+  S P
Sbjct: 58  LLRGLNRPLARPSPAPSSSSPSPTPSASTSSSAKWIPVLDGAHARSPSPVLTPALRPSSP 117

Query: 222 DSSKLTTSDARP 257
              +L + D  P
Sbjct: 118 PRHRLASEDRAP 129


>UniRef50_Q756I8 Cluster: AER273Cp; n=1; Eremothecium gossypii|Rep:
           AER273Cp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 1421

 Score = 34.7 bits (76), Expect = 3.4
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = +3

Query: 423 IRHE--IDLQQYYDVNDVTFLFVFPLTTKYTLTRFVP--KLCLANFNNPLLSFSSITYIL 590
           + HE  +DL Q    N +  LF+  + ++       P  +LCL NF +PL S  + +++L
Sbjct: 763 LEHEDKLDLPQVNAFNCIRSLFINSMLSEACAPYVYPALELCLENFTSPLWSMRNCSFML 822

Query: 591 LTFVKNLL 614
            T ++N L
Sbjct: 823 FTALQNRL 830


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 875,046,835
Number of Sequences: 1657284
Number of extensions: 17234794
Number of successful extensions: 39389
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 37772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39374
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)