Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0227.Seq
         (928 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071630-1|AAL49252.1|  369|Drosophila melanogaster RE67616p pro...    31   3.0  
AE014134-3022|AAF53745.2|  369|Drosophila melanogaster CG15173-P...    31   3.0  

>AY071630-1|AAL49252.1|  369|Drosophila melanogaster RE67616p
           protein.
          Length = 369

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 391 LSHSRYRPRAEFGTRSICSN 450
           L  SRY  R+EFG R +CSN
Sbjct: 31  LKRSRYHQRSEFGCRPLCSN 50


>AE014134-3022|AAF53745.2|  369|Drosophila melanogaster CG15173-PA
           protein.
          Length = 369

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 391 LSHSRYRPRAEFGTRSICSN 450
           L  SRY  R+EFG R +CSN
Sbjct: 31  LKRSRYHQRSEFGCRPLCSN 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,289,564
Number of Sequences: 53049
Number of extensions: 797278
Number of successful extensions: 1707
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1706
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4566862269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)