Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0226.Seq
         (742 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    77   3e-13
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    40   0.064
UniRef50_Q9FPR2 Cluster: Lysine-rich arabinogalactan protein 18 ...    35   2.4  
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    34   3.2  
UniRef50_A0QK95 Cluster: Putative uncharacterized protein; n=2; ...    33   7.4  
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    33   7.4  
UniRef50_Q4P0I5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.4  
UniRef50_A7HGN2 Cluster: Aspartate-semialdehyde dehydrogenase; n...    33   9.7  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 77.4 bits (182), Expect = 3e-13
 Identities = 42/72 (58%), Positives = 46/72 (63%)
 Frame = +2

Query: 257 PTARRTNATTSFLTATILVYXXXXXXXXXXXXRLALQLFLVKIFKVYSFRLRGLVRVPYR 436
           P AR  + TTSFLTA  L+Y            RLALQ  LVK FKV SF+L+GL RV Y 
Sbjct: 32  PPARSQDPTTSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVLYC 91

Query: 437 YFSSLPPRAGSG 472
           YFSSLPPR GSG
Sbjct: 92  YFSSLPPRVGSG 103


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 39.9 bits (89), Expect = 0.064
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +1

Query: 415 PRKSPVSLFFVTTSPCREW 471
           PRKSPV LFFVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_Q9FPR2 Cluster: Lysine-rich arabinogalactan protein 18
           precursor; n=3; Arabidopsis thaliana|Rep: Lysine-rich
           arabinogalactan protein 18 precursor - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 209

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +1

Query: 403 PITRPRKSPVSLFFVTTSPCREWVICAPAAFLGCGTVSQAPSPESNPDSPLXVT 564
           PI+ P KSP +    TTSP +   + +P         + A SP  +P SP  V+
Sbjct: 24  PISSPTKSPTTPSAPTTSPTKSPAVTSPTTAPAKTPTASASSPVESPKSPAPVS 77


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +1

Query: 325 SWNYRGCWHQTCP 363
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19


>UniRef50_A0QK95 Cluster: Putative uncharacterized protein; n=2;
           Mycobacterium avium|Rep: Putative uncharacterized
           protein - Mycobacterium avium (strain 104)
          Length = 380

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 247 GCVTDSAAHKCNYELFNRNNFSIRYWSWN 333
           G V     H C YE+F++    +R+W+WN
Sbjct: 151 GAVCVGFVHNCYYEIFDQLGPQLRWWAWN 179


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +1

Query: 511 VSQAPSPESNPDSPLXVTTMV 573
           +SQAPSPESN +SPL V  M+
Sbjct: 374 ISQAPSPESNSNSPLPVKAML 394


>UniRef50_Q4P0I5 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 689

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = +2

Query: 161 RDRILILNRRFLERRLTDDMLRKRVSITADASPTARRTNATTSFLTAT 304
           RD ++++NR+    RL +  LRK +  T  A+ +A   ++TT+   AT
Sbjct: 392 RDPLILVNRKLANARLVEASLRKLIQNTDRAAASAYAASSTTNGTAAT 439


>UniRef50_A7HGN2 Cluster: Aspartate-semialdehyde dehydrogenase; n=2;
           Anaeromyxobacter|Rep: Aspartate-semialdehyde
           dehydrogenase - Anaeromyxobacter sp. Fw109-5
          Length = 340

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 418 RKSPVSLFFVTTSPCREWVICAPAAFL-GCGTVSQAPSPESNPDSPLXVTTM 570
           R   V+LF V     REW   AP A+  GC  V  +P+  ++PD PL +  +
Sbjct: 66  RGCDVALFCVPAEVAREW---APRAWAEGCAVVDVSPAFRADPDVPLALAEL 114


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,057,025
Number of Sequences: 1657284
Number of extensions: 14594361
Number of successful extensions: 32595
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32585
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)