Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0226.Seq
         (742 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p pro...    29   5.0  
AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-P...    29   5.0  
AE014134-787|AAF50969.1|  528|Drosophila melanogaster CG11926-PA...    29   5.0  
BT010301-1|AAQ23619.1|  887|Drosophila melanogaster LD09626p pro...    29   8.8  
AY089336-1|AAL90074.1|  526|Drosophila melanogaster AT14307p pro...    29   8.8  
AE014296-771|AAF47842.3|  887|Drosophila melanogaster CG14998-PA...    29   8.8  
AE014296-768|AAF47841.3|  851|Drosophila melanogaster CG14998-PB...    29   8.8  
AE014296-767|AAN11586.2|  833|Drosophila melanogaster CG14998-PC...    29   8.8  

>BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p
           protein.
          Length = 2286

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +1

Query: 298 RNNFSIRYWSWNYRGCWHQTCP--PIVPR*NI*SVL 399
           R+ FS  +  WNY  CW   C   P+  R N+  +L
Sbjct: 327 RHGFSGLHLDWNYPKCWQSDCSRGPVTDRPNLTKLL 362


>AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-PA
           protein.
          Length = 2286

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +1

Query: 298 RNNFSIRYWSWNYRGCWHQTCP--PIVPR*NI*SVL 399
           R+ FS  +  WNY  CW   C   P+  R N+  +L
Sbjct: 327 RHGFSGLHLDWNYPKCWQSDCSRGPVTDRPNLTKLL 362


>AE014134-787|AAF50969.1|  528|Drosophila melanogaster CG11926-PA
           protein.
          Length = 528

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +2

Query: 140 STLTEEHRDRILILNRRFLERRLTDDMLRKRVSITADASPTARRTNATTSFLTATILVY 316
           S LT  H  +I    + F  RRL     R   ++ A+ S +A+ +N   +FLT +I V+
Sbjct: 206 SILTYSHMTKIFERRKNFDLRRLLSGSERLFYNLLANDSSSAKVSNNIFTFLTNSIRVF 264


>BT010301-1|AAQ23619.1|  887|Drosophila melanogaster LD09626p
           protein.
          Length = 887

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 179 LNRRFLERRLTDDMLRKRVSITADASPTARRTNAT 283
           L RR  ER L D   +KR S + D    +R  NAT
Sbjct: 215 LTRRSSERELADSGAKKRASSSTDRQDGSRSGNAT 249


>AY089336-1|AAL90074.1|  526|Drosophila melanogaster AT14307p
           protein.
          Length = 526

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +2

Query: 107 LICSK*NCRPTSTLTEEHRDRILILNRRFLERRLTDDMLRKRVSITADASPTARR 271
           LI  K N     T+ + +  RIL +++    R+LT D      ++T D + TAR+
Sbjct: 183 LIIDKANSARNLTIDKANSARILAIDKATSARKLTIDNSTSAGTLTIDKATTARK 237


>AE014296-771|AAF47842.3|  887|Drosophila melanogaster CG14998-PA,
           isoform A protein.
          Length = 887

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 179 LNRRFLERRLTDDMLRKRVSITADASPTARRTNAT 283
           L RR  ER L D   +KR S + D    +R  NAT
Sbjct: 215 LTRRSSERELADSGAKKRASSSTDRQDGSRSGNAT 249


>AE014296-768|AAF47841.3|  851|Drosophila melanogaster CG14998-PB,
           isoform B protein.
          Length = 851

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 179 LNRRFLERRLTDDMLRKRVSITADASPTARRTNAT 283
           L RR  ER L D   +KR S + D    +R  NAT
Sbjct: 179 LTRRSSERELADSGAKKRASSSTDRQDGSRSGNAT 213


>AE014296-767|AAN11586.2|  833|Drosophila melanogaster CG14998-PC,
           isoform C protein.
          Length = 833

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 179 LNRRFLERRLTDDMLRKRVSITADASPTARRTNAT 283
           L RR  ER L D   +KR S + D    +R  NAT
Sbjct: 161 LTRRSSERELADSGAKKRASSSTDRQDGSRSGNAT 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,754,984
Number of Sequences: 53049
Number of extensions: 689451
Number of successful extensions: 1649
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1649
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)