Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0222.Seq
         (357 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    38   0.051
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    37   0.12 
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   1.1  
UniRef50_Q7RAM4 Cluster: Putative uncharacterized protein PY0647...    32   3.4  
UniRef50_A5NT36 Cluster: Alpha-L-arabinofuranosidase-like protei...    31   7.7  

>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
           Predicted protein - Nematostella vectensis
          Length = 79

 Score = 37.9 bits (84), Expect = 0.051
 Identities = 17/23 (73%), Positives = 17/23 (73%)
 Frame = -2

Query: 116 FHQSRTKXRGSKAIRYRPSSNRK 48
           F   RTK RGSK IRYRPSSN K
Sbjct: 6   FRCQRTKVRGSKTIRYRPSSNHK 28


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 36.7 bits (81), Expect = 0.12
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +2

Query: 125 GKCFR*XSSCDDPRISPLTSQYECXQ 202
           GKCFR   S ++ RISPLTS+Y+C Q
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 15/23 (65%), Positives = 15/23 (65%)
 Frame = -2

Query: 116 FHQSRTKXRGSKAIRYRPSSNRK 48
           FH  RTK  GSK IRY PS N K
Sbjct: 6   FHCQRTKVGGSKMIRYHPSLNHK 28


>UniRef50_Q7RAM4 Cluster: Putative uncharacterized protein PY06475;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY06475 - Plasmodium yoelii
           yoelii
          Length = 24

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -2

Query: 176 EVKFLDRRKTNXSESICQRCFH 111
           EVKFLD  +TN  ESIC + FH
Sbjct: 3   EVKFLDFLETNNCESICLKYFH 24


>UniRef50_A5NT36 Cluster: Alpha-L-arabinofuranosidase-like protein
           precursor; n=1; Methylobacterium sp. 4-46|Rep:
           Alpha-L-arabinofuranosidase-like protein precursor -
           Methylobacterium sp. 4-46
          Length = 704

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 112 INQERXLEVRRRLDTALVLTVNMSSSDPPTLLQW 11
           I  +  +E  RR+D  L++T+N+ S  P    +W
Sbjct: 297 IGTDEIIEAARRIDADLLITLNLGSGTPALAAEW 330


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 303,686,771
Number of Sequences: 1657284
Number of extensions: 4539986
Number of successful extensions: 8540
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8539
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11941480628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)